FFCP PHASE1:Hg19::chr1:205473865..205473872,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5129|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8751|TSSclassifier=S|UniProt=D6RGH0|association_with_transcript=-4bp_to_ENST00000506215_5end|description=CAGE_peak_8_at_CDK18_5end|id=chr1:205473865..205473872,+|ontology_enrichment_celltype=CL:0000066!4.70e-21!254;CL:0002076!6.48e-13!43;CL:0000223!1.46e-11!59;CL:0002251!2.62e-09!21|ontology_enrichment_celltype_v019=CL:0000319;1.07e-07;1!CL:0000244;1.78e-07;4!CL:0000731;1.78e-07;4|ontology_enrichment_celltype_v019_2=CL:0000319,1.54e-07,1;CL:0000244,2.06e-07,4;CL:0000731,2.06e-07,4|ontology_enrichment_development_v019=UBERON:0005754;2.99e-08;1!UBERON:0008801;4.35e-08;1!UBERON:0010227;1.07e-07;1|ontology_enrichment_disease=DOID:305!1.71e-20!106;DOID:0050687!1.44e-15!143;DOID:1749!3.68e-10!14;DOID:162!5.88e-10!235;DOID:14566!2.72e-09!239|ontology_enrichment_disease_v019=DOID:3030;1.07e-07;1|ontology_enrichment_disease_v019_2=DOID:3030,1.54e-07,1|ontology_enrichment_uberon=UBERON:0001004!4.25e-10!72;UBERON:0004119!2.08e-09!169;UBERON:0000925!2.08e-09!169;UBERON:0006595!2.08e-09!169;UBERON:0000064!1.03e-08!219;UBERON:0004121!2.50e-08!169;UBERON:0000033!3.52e-08!123;UBERON:0000062!8.54e-08!511;UBERON:0000924!9.11e-08!173;UBERON:0006601!9.11e-08!173;UBERON:0000153!1.00e-07!129;UBERON:0007811!1.00e-07!129;UBERON:0001007!2.18e-07!155;UBERON:0001555!2.18e-07!155;UBERON:0007026!2.18e-07!155;UBERON:0000161!3.69e-07!35;UBERON:0007023!6.09e-07!115|ontology_enrichment_uberon_v019=UBERON:0006947;3.67e-10;3!UBERON:0004054;3.67e-10;3!UBERON:0001000;2.99e-08;1!UBERON:0000998;2.99e-08;1!UBERON:0006868;2.99e-08;1!UBERON:0005352;2.99e-08;1!UBERON:0001831;4.35e-08;1!UBERON:0001567;4.35e-08;1!UBERON:0005904;7.97e-08;4!UBERON:0002079;1.07e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.36e-10,3;UBERON:0004054,3.36e-10,3;UBERON:0000998,2.70e-08,1;UBERON:0006868,2.70e-08,1;UBERON:0001000,2.89e-08,1;UBERON:0005352,2.89e-08,1;UBERON:0001831,3.55e-08,1;UBERON:0001567,3.55e-08,1;UBERON:0008801,3.55e-08,1;UBERON:0005904,7.47e-08,4;UBERON:0002079,9.72e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31326510656075,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0.261958150995425,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0.860413786167011,1.95157929807353,2.65059536642971,0.929551542956147,0.310983165046111,0.756962552626885,1.09493207722749,1.56449532329816,0,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0.100528972411631,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51183915378974,0.850650583454319,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0.0920809889358963,0,0,0,0,0.308061348417659,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0.764628819135115,1.66215201785745,0,0,0,0.256450125116389,0.984043937099117,0.325378394664303,0.206082023295445,0.183138929636687,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0.991709492165869,0.384380134730212,2.16941611240793,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,1.34060455107157,0,0.0941438007767792,2.15252686335615,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0.296964680832639,0.614321404198464,0,0,0,0,0,0.398495976502139,0,0.251932747854276,0.20453736500431,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,1.93448862085349,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0.179515288819544,0.325942115766024,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.816164040795739,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0.539209063845416,0,0,0,0.19566461893209,0,3.55125962564451,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0.881931576729399,1.30588809870604,0.34945333648406,0,0.483781656445426,0.219267951258557,0,0,0,0,0,0,0.0633107959558787,0.391102765469606,0.160317640503067,0,0.599428828746391,0.288180834308212,0,0.686379991447858,0,0.248505071130865,0.471388069233591,1.630850472883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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5129 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8751 | |||
|TSSclassifier=S | |||
|UniProt=D6RGH0 | |||
|association_with_transcript=-4bp_to_ENST00000506215_5end | |||
|description=CAGE_peak_8_at_CDK18_5end | |||
|id=chr1:205473865..205473872,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.70e-21!254;CL:0002076!6.48e-13!43;CL:0000223!1.46e-11!59;CL:0002251!2.62e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.07e-07;1!CL:0000244;1.78e-07;4!CL:0000731;1.78e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.54e-07,1;CL:0000244,2.06e-07,4;CL:0000731,2.06e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.99e-08;1!UBERON:0008801;4.35e-08;1!UBERON:0010227;1.07e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.71e-20!106;DOID:0050687!1.44e-15!143;DOID:1749!3.68e-10!14;DOID:162!5.88e-10!235;DOID:14566!2.72e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.07e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.54e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!4.25e-10!72;UBERON:0004119!2.08e-09!169;UBERON:0000925!2.08e-09!169;UBERON:0006595!2.08e-09!169;UBERON:0000064!1.03e-08!219;UBERON:0004121!2.50e-08!169;UBERON:0000033!3.52e-08!123;UBERON:0000062!8.54e-08!511;UBERON:0000924!9.11e-08!173;UBERON:0006601!9.11e-08!173;UBERON:0000153!1.00e-07!129;UBERON:0007811!1.00e-07!129;UBERON:0001007!2.18e-07!155;UBERON:0001555!2.18e-07!155;UBERON:0007026!2.18e-07!155;UBERON:0000161!3.69e-07!35;UBERON:0007023!6.09e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.67e-10;3!UBERON:0004054;3.67e-10;3!UBERON:0001000;2.99e-08;1!UBERON:0000998;2.99e-08;1!UBERON:0006868;2.99e-08;1!UBERON:0005352;2.99e-08;1!UBERON:0001831;4.35e-08;1!UBERON:0001567;4.35e-08;1!UBERON:0005904;7.97e-08;4!UBERON:0002079;1.07e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.36e-10,3;UBERON:0004054,3.36e-10,3;UBERON:0000998,2.70e-08,1;UBERON:0006868,2.70e-08,1;UBERON:0001000,2.89e-08,1;UBERON:0005352,2.89e-08,1;UBERON:0001831,3.55e-08,1;UBERON:0001567,3.55e-08,1;UBERON:0008801,3.55e-08,1;UBERON:0005904,7.47e-08,4;UBERON:0002079,9.72e-08,1 | |||
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| |||
|short_description=p8@CDK18 | |||
}} |
Revision as of 03:04, 12 September 2013
Short description: | p8@CDK18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_CDK18_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000506215_5end |
EntrezGene: | CDK18 |
HGNC: | 8751 |
UniProt: | D6RGH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.54e-07 | 1 |
transitional epithelial cell | 2.06e-07 | 4 |
urothelial cell | 2.06e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.36e-10 | 3 |
internal male genitalia | 3.36e-10 | 3 |
seminal vesicle | 2.70e-08 | 1 |
seminal fluid secreting gland | 2.70e-08 | 1 |
vas deferens | 2.89e-08 | 1 |
spermatic cord | 2.89e-08 | 1 |
parotid gland | 3.55e-08 | 1 |
cheek | 3.55e-08 | 1 |
parotid gland primordium | 3.55e-08 | 1 |
duct of male reproductive system | 7.47e-08 | 4 |
left cardiac atrium | 9.72e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.54e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.