FFCP PHASE1:Hg19::chr1:224033119..224033129,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3942|description=CAGE_peak_at_chr1:224033119..224033129,-|id=chr1:224033119..224033129,-|ontology_enrichment_celltype=CL:0000738!2.75e-26!140;CL:0000988!2.47e-25!182;CL:0000766!2.50e-24!76;CL:0000037!1.23e-23!172;CL:0000566!1.23e-23!172;CL:0000557!6.50e-23!71;CL:0002057!6.82e-23!42;CL:0002393!3.43e-22!9;CL:0002397!3.43e-22!9;CL:0002031!3.84e-22!124;CL:0000839!1.77e-21!70;CL:0000860!6.10e-21!45;CL:0002032!2.90e-20!165;CL:0000837!2.90e-20!165;CL:0000763!1.74e-18!112;CL:0000049!1.74e-18!112;CL:0002087!8.52e-18!119;CL:0002009!1.15e-16!65;CL:0002194!9.88e-16!63;CL:0000576!9.88e-16!63;CL:0000040!9.88e-16!63;CL:0000559!9.88e-16!63;CL:0002274!7.28e-13!5;CL:0000457!7.28e-13!5;CL:0002191!7.28e-13!5;CL:0000097!7.28e-13!5;CL:0000831!7.28e-13!5;CL:0002028!7.28e-13!5;CL:0000080!4.40e-10!6;CL:0000875!6.18e-08!3;CL:0002396!6.18e-08!3;CL:0000623!1.04e-07!3;CL:0000825!1.04e-07!3;CL:0000624!5.35e-07!6;CL:0000163!6.24e-07!9|ontology_enrichment_celltype_v019=CL:0000097;6.64e-21;5!CL:0002393;1.85e-17;6!CL:0002397;1.85e-17;6!CL:0000163;4.42e-12;9|ontology_enrichment_celltype_v019_2=CL:0000097,5.44e-21,5;CL:0002028,5.44e-21,5;CL:0000163,3.95e-12,9;CL:0002393,4.67e-12,9;CL:0002397,4.67e-12,9;CL:0002031,4.51e-10,120;CL:0000839,1.48e-09,66;CL:0000557,2.04e-09,67;CL:0000738,6.88e-09,136;CL:0000766,8.73e-09,72;CL:0002032,1.68e-07,161;CL:0000837,1.68e-07,161;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.19e-24!102;UBERON:0003061!5.19e-24!102;UBERON:0002193!2.13e-22!112;UBERON:0002371!5.61e-21!80;UBERON:0001474!6.40e-19!86;UBERON:0004765!3.88e-16!101;UBERON:0001434!3.88e-16!101;UBERON:0002405!3.85e-15!115;UBERON:0003081!2.30e-09!216;UBERON:0002204!1.30e-08!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.45e-08,76;UBERON:0001474,9.54e-08,82;UBERON:0004765,4.45e-07,90;UBERON:0002405,7.42e-07,93|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0.553995408531877,1.60435557976113,0.868043482863407,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,1.72372840368309,0,0,0,0,0,0.612167784741805,0.641858054152187,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.845021145247767,1.91343869968539,0.419317291016752,0.22465726229299,0.300353785683013,0.16072558669708,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786839080455332,1.17903228824749,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0,0,0,0.74291500265913,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,1.86595303986695,2.73827911492227,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.247127877893006,0.626531697032732,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p@chr1:224033119..224033129,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3942 | |||
|description=CAGE_peak_at_chr1:224033119..224033129,- | |||
|id=chr1:224033119..224033129,- | |||
|ontology_enrichment_celltype=CL:0000738!2.75e-26!140;CL:0000988!2.47e-25!182;CL:0000766!2.50e-24!76;CL:0000037!1.23e-23!172;CL:0000566!1.23e-23!172;CL:0000557!6.50e-23!71;CL:0002057!6.82e-23!42;CL:0002393!3.43e-22!9;CL:0002397!3.43e-22!9;CL:0002031!3.84e-22!124;CL:0000839!1.77e-21!70;CL:0000860!6.10e-21!45;CL:0002032!2.90e-20!165;CL:0000837!2.90e-20!165;CL:0000763!1.74e-18!112;CL:0000049!1.74e-18!112;CL:0002087!8.52e-18!119;CL:0002009!1.15e-16!65;CL:0002194!9.88e-16!63;CL:0000576!9.88e-16!63;CL:0000040!9.88e-16!63;CL:0000559!9.88e-16!63;CL:0002274!7.28e-13!5;CL:0000457!7.28e-13!5;CL:0002191!7.28e-13!5;CL:0000097!7.28e-13!5;CL:0000831!7.28e-13!5;CL:0002028!7.28e-13!5;CL:0000080!4.40e-10!6;CL:0000875!6.18e-08!3;CL:0002396!6.18e-08!3;CL:0000623!1.04e-07!3;CL:0000825!1.04e-07!3;CL:0000624!5.35e-07!6;CL:0000163!6.24e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.64e-21;5!CL:0002393;1.85e-17;6!CL:0002397;1.85e-17;6!CL:0000163;4.42e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.44e-21,5;CL:0002028,5.44e-21,5;CL:0000163,3.95e-12,9;CL:0002393,4.67e-12,9;CL:0002397,4.67e-12,9;CL:0002031,4.51e-10,120;CL:0000839,1.48e-09,66;CL:0000557,2.04e-09,67;CL:0000738,6.88e-09,136;CL:0000766,8.73e-09,72;CL:0002032,1.68e-07,161;CL:0000837,1.68e-07,161;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.19e-24!102;UBERON:0003061!5.19e-24!102;UBERON:0002193!2.13e-22!112;UBERON:0002371!5.61e-21!80;UBERON:0001474!6.40e-19!86;UBERON:0004765!3.88e-16!101;UBERON:0001434!3.88e-16!101;UBERON:0002405!3.85e-15!115;UBERON:0003081!2.30e-09!216;UBERON:0002204!1.30e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.45e-08,76;UBERON:0001474,9.54e-08,82;UBERON:0004765,4.45e-07,90;UBERON:0002405,7.42e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0.553995408531877,1.60435557976113,0.868043482863407,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,1.72372840368309,0,0,0,0,0,0.612167784741805,0.641858054152187,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.845021145247767,1.91343869968539,0.419317291016752,0.22465726229299,0.300353785683013,0.16072558669708,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786839080455332,1.17903228824749,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0,0,0,0.74291500265913,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,1.86595303986695,2.73827911492227,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.247127877893006,0.626531697032732,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr1:224033119..224033129,- | |||
}} |
Revision as of 03:53, 12 September 2013
Short description: | p@chr1:224033119..224033129, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:224033119..224033129, - |
Coexpression cluster: | C3942_Mast_CD14_CD4_CD8_Natural_Eosinophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.44e-21 | 5 |
basophil mast progenitor cell | 5.44e-21 | 5 |
endocrine cell | 3.95e-12 | 9 |
intermediate monocyte | 4.67e-12 | 9 |
CD14-positive, CD16-positive monocyte | 4.67e-12 | 9 |
hematopoietic lineage restricted progenitor cell | 4.51e-10 | 120 |
myeloid lineage restricted progenitor cell | 1.48e-09 | 66 |
granulocyte monocyte progenitor cell | 2.04e-09 | 67 |
leukocyte | 6.88e-09 | 136 |
myeloid leukocyte | 8.73e-09 | 72 |
hematopoietic oligopotent progenitor cell | 1.68e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-07 | 161 |
hematopoietic stem cell | 3.48e-07 | 168 |
hematopoietic cell | 8.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.45e-08 | 76 |
bone element | 9.54e-08 | 82 |
skeletal element | 4.45e-07 | 90 |
immune system | 7.42e-07 | 93 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.