FFCP PHASE1:Hg19::chr1:47183850..47183861,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9813|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=29051|TSSclassifier=S|UniProt=O75071|association_with_transcript=19bp_to_BC002525,BC018842_5end|coexpression_cluster_id=C86|description=CAGE_peak_12_at_KIAA0494_5end|id=chr1:47183850..47183861,-|ontology_enrichment_celltype=CL:0002139!1.97e-15!24;CL:0000115!5.09e-14!35;CL:0000071!2.08e-11!18;CL:0002546!2.08e-11!18;CL:0002078!2.33e-11!44;CL:0000213!1.71e-08!57;CL:0000215!1.71e-08!57;CL:1000413!1.18e-07!9|ontology_enrichment_celltype_v019=CL:0002144;5.99e-34;3!CL:0002138;1.71e-17;6!CL:0002139;5.56e-17;24!CL:0000115;1.07e-14;36!CL:0002253;6.43e-14;2!CL:0002262;1.37e-13;2!CL:1000398;1.37e-13;2!CL:0002078;4.98e-10;45!CL:0000213;5.23e-09;58!CL:0000215;5.23e-09;58!CL:0002563;1.31e-07;4|ontology_enrichment_celltype_v019_2=CL:0002144,6.51e-34,3;CL:0005020,1.85e-17,6;CL:0002138,1.85e-17,6;CL:0005022,1.85e-17,6;CL:0000115,2.08e-17,36;CL:0002139,5.92e-17,24;CL:0002078,5.46e-14,45;CL:0002253,6.43e-14,2;CL:0002262,1.37e-13,2;CL:1000398,1.37e-13,2;CL:0000213,6.52e-11,58;CL:0000215,6.52e-11,58;CL:0002563,1.31e-07,4|ontology_enrichment_development_v019=CL:0005022;1.71e-17;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!2.08e-11!18;UBERON:0004638!2.08e-11!18;UBERON:0004852!2.08e-11!18;UBERON:0000487!8.22e-09!22;UBERON:0003915!1.18e-07!9;UBERON:0004700!1.18e-07!9;UBERON:0001917!1.18e-07!9;UBERON:0006914!2.01e-07!25;UBERON:0000055!3.88e-07!69;UBERON:0003497!5.85e-07!3;UBERON:0003909!5.85e-07!3;UBERON:0003835!5.85e-07!3;UBERON:0001281!5.85e-07!3|ontology_enrichment_uberon_v019=UBERON:0010523;5.99e-34;3!UBERON:0001915;5.99e-34;3!UBERON:0001982;5.99e-34;3!UBERON:0000341;1.37e-13;2!UBERON:0001281;1.37e-13;2!UBERON:0003497;1.37e-13;2!UBERON:0003909;1.37e-13;2!UBERON:0003835;1.37e-13;2!UBERON:0001473;2.20e-13;8!UBERON:0004536;2.20e-13;8!UBERON:0006558;2.20e-13;8!UBERON:0002465;6.60e-11;10!UBERON:0001280;1.67e-09;3!UBERON:0004647;1.67e-09;3!UBERON:0001052;1.31e-07;4!UBERON:0001242;1.31e-07;4!UBERON:0001262;1.31e-07;4!UBERON:0004786;1.31e-07;4!UBERON:0004808;1.31e-07;4!UBERON:0001277;1.31e-07;4!UBERON:0000490;2.21e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0010523,6.51e-34,3;UBERON:0001915,6.51e-34,3;UBERON:0001982,6.51e-34,3;UBERON:0000341,1.21e-13,2;UBERON:0001281,1.37e-13,2;UBERON:0003497,1.37e-13,2;UBERON:0003909,1.37e-13,2;UBERON:0003835,1.37e-13,2;UBERON:0001473,2.34e-13,8;UBERON:0004536,2.34e-13,8;UBERON:0006558,2.34e-13,8;UBERON:0002465,6.94e-11,10;UBERON:0001280,1.67e-09,3;UBERON:0004647,1.67e-09,3;UBERON:0005171,1.67e-09,3;UBERON:0000055,2.44e-09,68;UBERON:0002049,3.64e-08,78;UBERON:0007798,3.64e-08,78;UBERON:0001052,1.31e-07,4;UBERON:0001242,1.31e-07,4;UBERON:0001262,1.31e-07,4;UBERON:0004786,1.31e-07,4;UBERON:0004808,1.31e-07,4;UBERON:0001277,1.31e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0,0.419499436209906,0.550236083880135,0.835979866147242,1.03366703667732,0,7.69857409358742,3.22263453687318,0,2.4406205754817,0.367663080345869,0,0.357198913136319,0,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.880484340132261,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0.158936578980379,0,0,0,11.4685979063308,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9813 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29051 | |||
|TSSclassifier=S | |||
|UniProt=O75071 | |||
|association_with_transcript=19bp_to_BC002525,BC018842_5end | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_12_at_KIAA0494_5end | |||
|id=chr1:47183850..47183861,- | |||
|ontology_enrichment_celltype=CL:0002139!1.97e-15!24;CL:0000115!5.09e-14!35;CL:0000071!2.08e-11!18;CL:0002546!2.08e-11!18;CL:0002078!2.33e-11!44;CL:0000213!1.71e-08!57;CL:0000215!1.71e-08!57;CL:1000413!1.18e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002144;5.99e-34;3!CL:0002138;1.71e-17;6!CL:0002139;5.56e-17;24!CL:0000115;1.07e-14;36!CL:0002253;6.43e-14;2!CL:0002262;1.37e-13;2!CL:1000398;1.37e-13;2!CL:0002078;4.98e-10;45!CL:0000213;5.23e-09;58!CL:0000215;5.23e-09;58!CL:0002563;1.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,6.51e-34,3;CL:0005020,1.85e-17,6;CL:0002138,1.85e-17,6;CL:0005022,1.85e-17,6;CL:0000115,2.08e-17,36;CL:0002139,5.92e-17,24;CL:0002078,5.46e-14,45;CL:0002253,6.43e-14,2;CL:0002262,1.37e-13,2;CL:1000398,1.37e-13,2;CL:0000213,6.52e-11,58;CL:0000215,6.52e-11,58;CL:0002563,1.31e-07,4 | |||
|ontology_enrichment_development_v019=CL:0005022;1.71e-17;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.08e-11!18;UBERON:0004638!2.08e-11!18;UBERON:0004852!2.08e-11!18;UBERON:0000487!8.22e-09!22;UBERON:0003915!1.18e-07!9;UBERON:0004700!1.18e-07!9;UBERON:0001917!1.18e-07!9;UBERON:0006914!2.01e-07!25;UBERON:0000055!3.88e-07!69;UBERON:0003497!5.85e-07!3;UBERON:0003909!5.85e-07!3;UBERON:0003835!5.85e-07!3;UBERON:0001281!5.85e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;5.99e-34;3!UBERON:0001915;5.99e-34;3!UBERON:0001982;5.99e-34;3!UBERON:0000341;1.37e-13;2!UBERON:0001281;1.37e-13;2!UBERON:0003497;1.37e-13;2!UBERON:0003909;1.37e-13;2!UBERON:0003835;1.37e-13;2!UBERON:0001473;2.20e-13;8!UBERON:0004536;2.20e-13;8!UBERON:0006558;2.20e-13;8!UBERON:0002465;6.60e-11;10!UBERON:0001280;1.67e-09;3!UBERON:0004647;1.67e-09;3!UBERON:0001052;1.31e-07;4!UBERON:0001242;1.31e-07;4!UBERON:0001262;1.31e-07;4!UBERON:0004786;1.31e-07;4!UBERON:0004808;1.31e-07;4!UBERON:0001277;1.31e-07;4!UBERON:0000490;2.21e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,6.51e-34,3;UBERON:0001915,6.51e-34,3;UBERON:0001982,6.51e-34,3;UBERON:0000341,1.21e-13,2;UBERON:0001281,1.37e-13,2;UBERON:0003497,1.37e-13,2;UBERON:0003909,1.37e-13,2;UBERON:0003835,1.37e-13,2;UBERON:0001473,2.34e-13,8;UBERON:0004536,2.34e-13,8;UBERON:0006558,2.34e-13,8;UBERON:0002465,6.94e-11,10;UBERON:0001280,1.67e-09,3;UBERON:0004647,1.67e-09,3;UBERON:0005171,1.67e-09,3;UBERON:0000055,2.44e-09,68;UBERON:0002049,3.64e-08,78;UBERON:0007798,3.64e-08,78;UBERON:0001052,1.31e-07,4;UBERON:0001242,1.31e-07,4;UBERON:0001262,1.31e-07,4;UBERON:0004786,1.31e-07,4;UBERON:0004808,1.31e-07,4;UBERON:0001277,1.31e-07,4 | |||
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|short_description=p12@KIAA0494 | |||
}} |
Revision as of 06:00, 12 September 2013
Short description: | p12@KIAA0494 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_KIAA0494_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 19bp_to_BC002525, BC018842_5end |
EntrezGene: | KIAA0494 |
HGNC: | 29051 |
UniProt: | O75071 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 6.51e-34 | 3 |
lymphangioblast | 1.85e-17 | 6 |
endothelial cell of lymphatic vessel | 1.85e-17 | 6 |
vascular lymphangioblast | 1.85e-17 | 6 |
endothelial cell | 2.08e-17 | 36 |
endothelial cell of vascular tree | 5.92e-17 | 24 |
meso-epithelial cell | 5.46e-14 | 45 |
epithelial cell of large intestine | 6.43e-14 | 2 |
endothelial cell of sinusoid | 1.37e-13 | 2 |
endothelial cell of hepatic sinusoid | 1.37e-13 | 2 |
lining cell | 6.52e-11 | 58 |
barrier cell | 6.52e-11 | 58 |
intestinal epithelial cell | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 6.51e-34 | 3 |
endothelium of capillary | 6.51e-34 | 3 |
capillary | 6.51e-34 | 3 |
throat | 1.21e-13 | 2 |
hepatic sinusoid | 1.37e-13 | 2 |
abdomen blood vessel | 1.37e-13 | 2 |
sinusoid | 1.37e-13 | 2 |
abdominal segment blood vessel | 1.37e-13 | 2 |
lymphatic vessel | 2.34e-13 | 8 |
lymph vasculature | 2.34e-13 | 8 |
lymphatic part of lymphoid system | 2.34e-13 | 8 |
lymphoid system | 6.94e-11 | 10 |
liver parenchyma | 1.67e-09 | 3 |
liver lobule | 1.67e-09 | 3 |
hepatic duct | 1.67e-09 | 3 |
vessel | 2.44e-09 | 68 |
vasculature | 3.64e-08 | 78 |
vascular system | 3.64e-08 | 78 |
rectum | 1.31e-07 | 4 |
intestinal mucosa | 1.31e-07 | 4 |
wall of intestine | 1.31e-07 | 4 |
gastrointestinal system mucosa | 1.31e-07 | 4 |
gastrointestinal system epithelium | 1.31e-07 | 4 |
intestinal epithelium | 1.31e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.