FFCP PHASE1:Hg19::chr1:6511322..6511327,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83715|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13281|TSSclassifier=N|UniProt=|association_with_transcript=-390bp_to_ENST00000434576_5end|coexpression_cluster_id=C211|description=CAGE_peak_21_at_ESPN_5end|id=chr1:6511322..6511327,+|ontology_enrichment_celltype=CL:0002563!1.40e-11!4;CL:0000181!2.29e-08!12;CL:0000417!2.29e-08!12;CL:0000668!2.29e-08!12;CL:0000414!2.29e-08!12;CL:0000412!2.29e-08!12;CL:0000182!2.29e-08!12|ontology_enrichment_celltype_v019=CL:0002563;3.42e-11;4|ontology_enrichment_celltype_v019_2=CL:0002563,3.42e-11,4|ontology_enrichment_development_v019=UBERON:0004161;1.95e-15;11!UBERON:0009497;3.12e-13;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!8.03e-14!19;UBERON:0006925!8.03e-14!19;UBERON:0008836!8.03e-14!19;UBERON:0000160!2.33e-13!27;UBERON:0008835!6.32e-12!22;UBERON:0003894!6.32e-12!22;UBERON:0003929!1.28e-11!54;UBERON:0001242!1.40e-11!4;UBERON:0001262!1.40e-11!4;UBERON:0004786!1.40e-11!4;UBERON:0004808!1.40e-11!4;UBERON:0001277!1.40e-11!4;UBERON:0009854!2.10e-11!23;UBERON:0001155!3.09e-11!9;UBERON:0007499!1.75e-10!25;UBERON:0009497!1.75e-10!25;UBERON:0000015!1.75e-10!25;UBERON:0002423!1.75e-10!25;UBERON:0006235!1.75e-10!25;UBERON:0004161!1.75e-10!25;UBERON:0005409!2.66e-10!35;UBERON:0005057!4.48e-10!26;UBERON:0009856!4.48e-10!26;UBERON:0004921!5.47e-10!129;UBERON:0004185!5.47e-10!129;UBERON:0003350!1.92e-09!5;UBERON:0000059!2.74e-09!11;UBERON:0005172!1.13e-08!55;UBERON:0005173!1.13e-08!55;UBERON:0002365!1.98e-08!31;UBERON:0002330!1.98e-08!31;UBERON:0001007!5.10e-08!155;UBERON:0001555!5.10e-08!155;UBERON:0007026!5.10e-08!155;UBERON:0002417!9.40e-08!61;UBERON:0000916!9.40e-08!61;UBERON:0002368!1.89e-07!35;UBERON:0005911!2.50e-07!82;UBERON:0004119!3.31e-07!169;UBERON:0000925!3.31e-07!169;UBERON:0006595!3.31e-07!169|ontology_enrichment_uberon_v019=UBERON:0000160;1.52e-20;17!UBERON:0005409;2.78e-16;22!UBERON:0001242;3.42e-11;4!UBERON:0001262;3.42e-11;4!UBERON:0004786;3.42e-11;4!UBERON:0004808;3.42e-11;4!UBERON:0001277;3.42e-11;4!UBERON:0004921;9.14e-11;33!UBERON:0001007;5.30e-10;81!UBERON:0002107;2.21e-09;19!UBERON:0006925;2.21e-09;19!UBERON:0002108;2.63e-09;4!UBERON:0002423;2.31e-07;25!UBERON:0000485;6.04e-07;7!UBERON:0003929;6.04e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.47e-20,17;UBERON:0005409,1.62e-14,25;UBERON:0001242,3.42e-11,4;UBERON:0001262,3.42e-11,4;UBERON:0004786,3.42e-11,4;UBERON:0004808,3.42e-11,4;UBERON:0001277,3.42e-11,4;UBERON:0002107,2.26e-09,19;UBERON:0006925,2.26e-09,19;UBERON:0008836,2.26e-09,19;UBERON:0002108,2.74e-09,4;UBERON:0004921,6.01e-09,118;UBERON:0008835,3.15e-08,22;UBERON:0003894,3.15e-08,22;UBERON:0009854,6.52e-08,23;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0003929,2.17e-07,54;UBERON:0007499,2.35e-07,25;UBERON:0009497,2.35e-07,25;UBERON:0000015,2.35e-07,25;UBERON:0002423,2.35e-07,25;UBERON:0006235,2.35e-07,25;UBERON:0004161,2.35e-07,25;UBERON:0009856,4.15e-07,26;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,1.50377859655677,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.329663433524666,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13281 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-390bp_to_ENST00000434576_5end | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_21_at_ESPN_5end | |||
|id=chr1:6511322..6511327,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.40e-11!4;CL:0000181!2.29e-08!12;CL:0000417!2.29e-08!12;CL:0000668!2.29e-08!12;CL:0000414!2.29e-08!12;CL:0000412!2.29e-08!12;CL:0000182!2.29e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.42e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.42e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.95e-15;11!UBERON:0009497;3.12e-13;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.03e-14!19;UBERON:0006925!8.03e-14!19;UBERON:0008836!8.03e-14!19;UBERON:0000160!2.33e-13!27;UBERON:0008835!6.32e-12!22;UBERON:0003894!6.32e-12!22;UBERON:0003929!1.28e-11!54;UBERON:0001242!1.40e-11!4;UBERON:0001262!1.40e-11!4;UBERON:0004786!1.40e-11!4;UBERON:0004808!1.40e-11!4;UBERON:0001277!1.40e-11!4;UBERON:0009854!2.10e-11!23;UBERON:0001155!3.09e-11!9;UBERON:0007499!1.75e-10!25;UBERON:0009497!1.75e-10!25;UBERON:0000015!1.75e-10!25;UBERON:0002423!1.75e-10!25;UBERON:0006235!1.75e-10!25;UBERON:0004161!1.75e-10!25;UBERON:0005409!2.66e-10!35;UBERON:0005057!4.48e-10!26;UBERON:0009856!4.48e-10!26;UBERON:0004921!5.47e-10!129;UBERON:0004185!5.47e-10!129;UBERON:0003350!1.92e-09!5;UBERON:0000059!2.74e-09!11;UBERON:0005172!1.13e-08!55;UBERON:0005173!1.13e-08!55;UBERON:0002365!1.98e-08!31;UBERON:0002330!1.98e-08!31;UBERON:0001007!5.10e-08!155;UBERON:0001555!5.10e-08!155;UBERON:0007026!5.10e-08!155;UBERON:0002417!9.40e-08!61;UBERON:0000916!9.40e-08!61;UBERON:0002368!1.89e-07!35;UBERON:0005911!2.50e-07!82;UBERON:0004119!3.31e-07!169;UBERON:0000925!3.31e-07!169;UBERON:0006595!3.31e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.52e-20;17!UBERON:0005409;2.78e-16;22!UBERON:0001242;3.42e-11;4!UBERON:0001262;3.42e-11;4!UBERON:0004786;3.42e-11;4!UBERON:0004808;3.42e-11;4!UBERON:0001277;3.42e-11;4!UBERON:0004921;9.14e-11;33!UBERON:0001007;5.30e-10;81!UBERON:0002107;2.21e-09;19!UBERON:0006925;2.21e-09;19!UBERON:0002108;2.63e-09;4!UBERON:0002423;2.31e-07;25!UBERON:0000485;6.04e-07;7!UBERON:0003929;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.47e-20,17;UBERON:0005409,1.62e-14,25;UBERON:0001242,3.42e-11,4;UBERON:0001262,3.42e-11,4;UBERON:0004786,3.42e-11,4;UBERON:0004808,3.42e-11,4;UBERON:0001277,3.42e-11,4;UBERON:0002107,2.26e-09,19;UBERON:0006925,2.26e-09,19;UBERON:0008836,2.26e-09,19;UBERON:0002108,2.74e-09,4;UBERON:0004921,6.01e-09,118;UBERON:0008835,3.15e-08,22;UBERON:0003894,3.15e-08,22;UBERON:0009854,6.52e-08,23;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0003929,2.17e-07,54;UBERON:0007499,2.35e-07,25;UBERON:0009497,2.35e-07,25;UBERON:0000015,2.35e-07,25;UBERON:0002423,2.35e-07,25;UBERON:0006235,2.35e-07,25;UBERON:0004161,2.35e-07,25;UBERON:0009856,4.15e-07,26;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,1.50377859655677,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.329663433524666,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,2.39239890134628,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p21@ESPN | |||
}} |
Revision as of 06:25, 12 September 2013
Short description: | p21@ESPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_ESPN_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | -390bp_to_ENST00000434576_5end |
EntrezGene: | ESPN |
HGNC: | 13281 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.47e-20 | 17 |
gastrointestinal system | 1.62e-14 | 25 |
intestinal mucosa | 3.42e-11 | 4 |
wall of intestine | 3.42e-11 | 4 |
gastrointestinal system mucosa | 3.42e-11 | 4 |
gastrointestinal system epithelium | 3.42e-11 | 4 |
intestinal epithelium | 3.42e-11 | 4 |
liver | 2.26e-09 | 19 |
digestive gland | 2.26e-09 | 19 |
liver bud | 2.26e-09 | 19 |
small intestine | 2.74e-09 | 4 |
subdivision of digestive tract | 6.01e-09 | 118 |
hepatic diverticulum | 3.15e-08 | 22 |
liver primordium | 3.15e-08 | 22 |
digestive tract diverticulum | 6.52e-08 | 23 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
gut epithelium | 2.17e-07 | 54 |
epithelial sac | 2.35e-07 | 25 |
epithelium of foregut-midgut junction | 2.35e-07 | 25 |
anatomical boundary | 2.35e-07 | 25 |
hepatobiliary system | 2.35e-07 | 25 |
foregut-midgut junction | 2.35e-07 | 25 |
septum transversum | 2.35e-07 | 25 |
sac | 4.15e-07 | 26 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.