FFCP PHASE1:Hg19::chr20:3713368..3713388,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=116835|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16193|TSSclassifier=S|UniProt=Q5JX83|association_with_transcript=10bp_to_ENST00000399701_5end|description=CAGE_peak_2_at_HSPA12B_5end|id=chr20:3713368..3713388,+|ontology_enrichment_celltype=CL:0000071!1.58e-10!18;CL:0002546!1.58e-10!18;CL:0002139!3.57e-09!24;CL:0000115!6.55e-08!35|ontology_enrichment_celltype_v019=CL:0000071;1.55e-10;18!CL:0002144;1.65e-09;3!CL:0002139;1.84e-07;24|ontology_enrichment_celltype_v019_2=CL:0000071,1.03e-10,18;CL:0002546,1.03e-10,18;CL:0002144,1.87e-09,3;CL:0002139,1.38e-07,24;CL:0000115,7.89e-07,36|ontology_enrichment_development_v019=UBERON:0004872;1.21e-13;7!CL:0002546;1.55e-10;18!UBERON:0005062;2.89e-07;4!UBERON:0007284;2.89e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.18e-59!115;UBERON:0001049!1.02e-15!57;UBERON:0005068!1.02e-15!57;UBERON:0006241!1.02e-15!57;UBERON:0007135!1.02e-15!57;UBERON:0003080!7.16e-15!42;UBERON:0002616!7.57e-15!59;UBERON:0001893!3.76e-14!34;UBERON:0002780!5.61e-14!41;UBERON:0001890!5.61e-14!41;UBERON:0006240!5.61e-14!41;UBERON:0000955!6.54e-14!69;UBERON:0006238!6.54e-14!69;UBERON:0002020!1.09e-13!34;UBERON:0003528!1.09e-13!34;UBERON:0001017!1.89e-13!82;UBERON:0005743!2.57e-13!86;UBERON:0002791!3.28e-13!33;UBERON:0004111!5.14e-13!241;UBERON:0001869!1.13e-12!32;UBERON:0003075!1.73e-12!86;UBERON:0007284!1.73e-12!86;UBERON:0002619!2.76e-12!22;UBERON:0000025!3.64e-12!194;UBERON:0002346!1.97e-11!90;UBERON:0000477!4.51e-11!286;UBERON:0000073!5.58e-11!94;UBERON:0001016!5.58e-11!94;UBERON:0001950!1.07e-10!20;UBERON:0001986!1.58e-10!18;UBERON:0004638!1.58e-10!18;UBERON:0004852!1.58e-10!18;UBERON:0000956!2.73e-10!25;UBERON:0000203!2.73e-10!25;UBERON:0000468!1.49e-09!659;UBERON:0000119!2.31e-09!312;UBERON:0000483!3.04e-09!309;UBERON:0000153!7.12e-09!129;UBERON:0007811!7.12e-09!129;UBERON:0003056!7.84e-09!61;UBERON:0003135!3.74e-08!11;UBERON:0000033!5.14e-08!123;UBERON:0000487!6.22e-08!22;UBERON:0000922!7.62e-08!612;UBERON:0000481!2.69e-07!347|ontology_enrichment_uberon_v019=UBERON:0004638;1.55e-10;18!UBERON:0001986;1.55e-10;18!UBERON:0004852;1.55e-10;18!UBERON:0003978;1.36e-09;3!UBERON:0000946;1.36e-09;3!UBERON:0010523;1.65e-09;3!UBERON:0001915;1.65e-09;3!UBERON:0001982;1.65e-09;3!UBERON:0007023;1.89e-09;114!UBERON:0004151;4.90e-09;3!UBERON:0000487;2.68e-08;22!UBERON:0007100;3.09e-07;25!UBERON:0006914;4.27e-07;25!UBERON:0002133;4.33e-07;2!UBERON:0002081;6.54e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.47e-35,114;UBERON:0004638,1.03e-10,18;UBERON:0001986,1.03e-10,18;UBERON:0004852,1.03e-10,18;UBERON:0003978,1.30e-09,3;UBERON:0009751,1.30e-09,3;UBERON:0000946,1.30e-09,3;UBERON:0002523,1.30e-09,3;UBERON:0005983,1.30e-09,3;UBERON:0002165,1.30e-09,3;UBERON:0002062,1.30e-09,3;UBERON:0007280,1.30e-09,3;UBERON:0010523,1.87e-09,3;UBERON:0001915,1.87e-09,3;UBERON:0001982,1.87e-09,3;UBERON:0004151,5.89e-09,3;UBERON:0000487,1.95e-08,22;UBERON:0004872,4.49e-08,83;UBERON:0000025,9.88e-08,192;UBERON:0006914,3.25e-07,25;UBERON:0002133,4.36e-07,2;UBERON:0002081,7.69e-07,2;UBERON:0010227,7.69e-07,2;UBERON:0004111,8.09e-07,240|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0.39752481473341,1.72046919021225,0,0,2.93649605346934,0.550236083880135,0.626984899610432,0.258416759169329,0,0,3.62546385398232,2.28081631715554,3.41686880567437,1.83831540172934,0,0.803697554556718,1.12264686313085,1.35133776579987,0,0,2.93122790288652,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0.570471821544449,0,0.23486899728753,0,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.265059536642971,0.348581828608555,0.310983165046111,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.521301686808497,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0.680374821106063,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0.15350367472613,0,0.322260734604821,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=116835 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16193 | |||
|TSSclassifier=S | |||
|UniProt=Q5JX83 | |||
|association_with_transcript=10bp_to_ENST00000399701_5end | |||
|description=CAGE_peak_2_at_HSPA12B_5end | |||
|id=chr20:3713368..3713388,+ | |||
|ontology_enrichment_celltype=CL:0000071!1.58e-10!18;CL:0002546!1.58e-10!18;CL:0002139!3.57e-09!24;CL:0000115!6.55e-08!35 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.55e-10;18!CL:0002144;1.65e-09;3!CL:0002139;1.84e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.03e-10,18;CL:0002546,1.03e-10,18;CL:0002144,1.87e-09,3;CL:0002139,1.38e-07,24;CL:0000115,7.89e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.21e-13;7!CL:0002546;1.55e-10;18!UBERON:0005062;2.89e-07;4!UBERON:0007284;2.89e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.18e-59!115;UBERON:0001049!1.02e-15!57;UBERON:0005068!1.02e-15!57;UBERON:0006241!1.02e-15!57;UBERON:0007135!1.02e-15!57;UBERON:0003080!7.16e-15!42;UBERON:0002616!7.57e-15!59;UBERON:0001893!3.76e-14!34;UBERON:0002780!5.61e-14!41;UBERON:0001890!5.61e-14!41;UBERON:0006240!5.61e-14!41;UBERON:0000955!6.54e-14!69;UBERON:0006238!6.54e-14!69;UBERON:0002020!1.09e-13!34;UBERON:0003528!1.09e-13!34;UBERON:0001017!1.89e-13!82;UBERON:0005743!2.57e-13!86;UBERON:0002791!3.28e-13!33;UBERON:0004111!5.14e-13!241;UBERON:0001869!1.13e-12!32;UBERON:0003075!1.73e-12!86;UBERON:0007284!1.73e-12!86;UBERON:0002619!2.76e-12!22;UBERON:0000025!3.64e-12!194;UBERON:0002346!1.97e-11!90;UBERON:0000477!4.51e-11!286;UBERON:0000073!5.58e-11!94;UBERON:0001016!5.58e-11!94;UBERON:0001950!1.07e-10!20;UBERON:0001986!1.58e-10!18;UBERON:0004638!1.58e-10!18;UBERON:0004852!1.58e-10!18;UBERON:0000956!2.73e-10!25;UBERON:0000203!2.73e-10!25;UBERON:0000468!1.49e-09!659;UBERON:0000119!2.31e-09!312;UBERON:0000483!3.04e-09!309;UBERON:0000153!7.12e-09!129;UBERON:0007811!7.12e-09!129;UBERON:0003056!7.84e-09!61;UBERON:0003135!3.74e-08!11;UBERON:0000033!5.14e-08!123;UBERON:0000487!6.22e-08!22;UBERON:0000922!7.62e-08!612;UBERON:0000481!2.69e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.55e-10;18!UBERON:0001986;1.55e-10;18!UBERON:0004852;1.55e-10;18!UBERON:0003978;1.36e-09;3!UBERON:0000946;1.36e-09;3!UBERON:0010523;1.65e-09;3!UBERON:0001915;1.65e-09;3!UBERON:0001982;1.65e-09;3!UBERON:0007023;1.89e-09;114!UBERON:0004151;4.90e-09;3!UBERON:0000487;2.68e-08;22!UBERON:0007100;3.09e-07;25!UBERON:0006914;4.27e-07;25!UBERON:0002133;4.33e-07;2!UBERON:0002081;6.54e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.47e-35,114;UBERON:0004638,1.03e-10,18;UBERON:0001986,1.03e-10,18;UBERON:0004852,1.03e-10,18;UBERON:0003978,1.30e-09,3;UBERON:0009751,1.30e-09,3;UBERON:0000946,1.30e-09,3;UBERON:0002523,1.30e-09,3;UBERON:0005983,1.30e-09,3;UBERON:0002165,1.30e-09,3;UBERON:0002062,1.30e-09,3;UBERON:0007280,1.30e-09,3;UBERON:0010523,1.87e-09,3;UBERON:0001915,1.87e-09,3;UBERON:0001982,1.87e-09,3;UBERON:0004151,5.89e-09,3;UBERON:0000487,1.95e-08,22;UBERON:0004872,4.49e-08,83;UBERON:0000025,9.88e-08,192;UBERON:0006914,3.25e-07,25;UBERON:0002133,4.36e-07,2;UBERON:0002081,7.69e-07,2;UBERON:0010227,7.69e-07,2;UBERON:0004111,8.09e-07,240 | |||
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|short_description=p2@HSPA12B | |||
}} |
Revision as of 08:26, 12 September 2013
Short description: | p2@HSPA12B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HSPA12B_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000399701_5end |
EntrezGene: | HSPA12B |
HGNC: | 16193 |
UniProt: | Q5JX83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.03e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.03e-10 | 18 |
capillary endothelial cell | 1.87e-09 | 3 |
endothelial cell of vascular tree | 1.38e-07 | 24 |
endothelial cell | 7.89e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.47e-35 | 114 |
blood vessel endothelium | 1.03e-10 | 18 |
endothelium | 1.03e-10 | 18 |
cardiovascular system endothelium | 1.03e-10 | 18 |
valve | 1.30e-09 | 3 |
cardiac mesenchyme | 1.30e-09 | 3 |
cardial valve | 1.30e-09 | 3 |
tunica intima | 1.30e-09 | 3 |
heart layer | 1.30e-09 | 3 |
endocardium | 1.30e-09 | 3 |
endocardial cushion | 1.30e-09 | 3 |
presumptive endocardium | 1.30e-09 | 3 |
microcirculatory vessel | 1.87e-09 | 3 |
endothelium of capillary | 1.87e-09 | 3 |
capillary | 1.87e-09 | 3 |
cardiac chamber | 5.89e-09 | 3 |
simple squamous epithelium | 1.95e-08 | 22 |
splanchnic layer of lateral plate mesoderm | 4.49e-08 | 83 |
tube | 9.88e-08 | 192 |
squamous epithelium | 3.25e-07 | 25 |
atrioventricular valve | 4.36e-07 | 2 |
cardiac atrium | 7.69e-07 | 2 |
future cardiac atrium | 7.69e-07 | 2 |
anatomical conduit | 8.09e-07 | 240 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.