FFCP PHASE1:Hg19::chr20:62573116..62573138,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54963|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15938|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_uc002yhj.2_5end|description=CAGE_peak_3_at_UCKL1_5end|id=chr20:62573116..62573138,-|ontology_enrichment_celltype=CL:0000738!4.87e-16!140;CL:0000791!4.61e-15!18;CL:0000789!4.61e-15!18;CL:0002420!4.61e-15!18;CL:0002419!4.61e-15!18;CL:0000790!4.61e-15!18;CL:0000838!5.63e-15!52;CL:0002087!8.23e-15!119;CL:0002031!9.42e-15!124;CL:0000542!1.84e-14!53;CL:0000051!1.84e-14!53;CL:0000037!8.49e-14!172;CL:0000566!8.49e-14!172;CL:0000084!2.32e-13!25;CL:0000827!2.32e-13!25;CL:0002032!1.16e-12!165;CL:0000837!1.16e-12!165;CL:0000988!2.99e-12!182;CL:0000625!1.70e-09!11;CL:0000236!4.58e-07!14|ontology_enrichment_celltype_v019=CL:0000791;2.37e-12;18!CL:0000789;2.37e-12;18!CL:0002419;2.37e-12;18!CL:0000625;6.67e-12;11!CL:0000084;6.42e-11;25!CL:0002097;5.94e-09;2!CL:0000542;3.10e-07;53|ontology_enrichment_celltype_v019_2=CL:0000791,8.97e-13,18;CL:0000789,8.97e-13,18;CL:0002420,8.97e-13,18;CL:0002419,8.97e-13,18;CL:0000790,8.97e-13,18;CL:0000625,2.73e-12,11;CL:0000838,1.57e-11,52;CL:0000084,2.86e-11,25;CL:0000827,2.86e-11,25;CL:0000542,2.97e-11,53;CL:0000051,2.97e-11,53;CL:0002097,7.28e-09,2|ontology_enrichment_development_v019=CL:0000790;2.37e-12;18!CL:0000051;3.10e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,1.96682138424452,1.53531759238885,0.77408061658038,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0.581592955118259,0.377875943688809,0.727752183563449,0,0,0,0.28769239232215,0,0,0,0.645484683583826,0,0.564727018627814,0.272906150057846,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0,0.632924774881769,0.633765858935825,0.425208599930087,0,0.112328631146495,0.150176892841506,0,0.570025487482497,0.39783335439818,0,1.75996244461323,0.546138611262131,0,0.426730222566507,0.800791974072025,0.574752439954483,0.661044872784862,0.954053754535364,2.27685187643779,0.587237189370939,1.14681968437569,0,0,0,0.786839080455332,0.786021525498329,0.616804496998528,0.334372990781356,0.32592226663359,0,5.84480185223734,3.45372416344038,1.76763544484902,1.10766947291811,1.62482318259009,1.5370958367081,0.650296737799391,0.986627427622057,1.10540007114339,2.60822777161547,3.26230438956533,1.07016331235885,4.18142095219907,3.73920830901968,2.68254345521345,0.68725489096526,0.759059076058509,0.95569624297229,0,0.950452044448374,1.80690142893327,1.79181255616186,1.24930726552346,0.473554504088034,1.64225599384209,2.82249440514625,1.60464117470104,0.724122019413995,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0,0.728590576585084,0,0,0,0.132957960518865,0,0.571994910780128,0,0,1.72046919021225,1.04142150482278,1.13061588384802,0.838998872419812,0.825354125820202,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0.735326160691737,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,1.34171076742555,1.19276791489337,0.69716365721711,0.310983165046111,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,3.37205259772859,0.502644862058154,0,0.325808305310325,0,0,0,0,0,0.462985512576611,0,0,0,0.246217006087397,0,0,0,0,0.141775097242386,1.25381931783988,0.581267877027924,0.383382679165211,0.492663237895943,0.352193736052904,0.829312462163088,0.288239906833923,0.88369703398466,0.126995788584338,0.381988425558278,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,1.18218456121156,0.862510299438069,1.66845947163673,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,1.44737618286021,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828728900423067,0,0,0,0.451199612907412,1.07821471946181,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,1.66215201785745,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,1.34710957815717,0,1.08890984861323,0.0941438007767792,0.43050537267123,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,1.23408681925858,0.648473311192717,0,0,0.213648142254946,0,0,0,0,0,0.956557636372934,0,0,3.17510374085824,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54963 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15938 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002yhj.2_5end | |||
|description=CAGE_peak_3_at_UCKL1_5end | |||
|id=chr20:62573116..62573138,- | |||
|ontology_enrichment_celltype=CL:0000738!4.87e-16!140;CL:0000791!4.61e-15!18;CL:0000789!4.61e-15!18;CL:0002420!4.61e-15!18;CL:0002419!4.61e-15!18;CL:0000790!4.61e-15!18;CL:0000838!5.63e-15!52;CL:0002087!8.23e-15!119;CL:0002031!9.42e-15!124;CL:0000542!1.84e-14!53;CL:0000051!1.84e-14!53;CL:0000037!8.49e-14!172;CL:0000566!8.49e-14!172;CL:0000084!2.32e-13!25;CL:0000827!2.32e-13!25;CL:0002032!1.16e-12!165;CL:0000837!1.16e-12!165;CL:0000988!2.99e-12!182;CL:0000625!1.70e-09!11;CL:0000236!4.58e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.37e-12;18!CL:0000789;2.37e-12;18!CL:0002419;2.37e-12;18!CL:0000625;6.67e-12;11!CL:0000084;6.42e-11;25!CL:0002097;5.94e-09;2!CL:0000542;3.10e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.97e-13,18;CL:0000789,8.97e-13,18;CL:0002420,8.97e-13,18;CL:0002419,8.97e-13,18;CL:0000790,8.97e-13,18;CL:0000625,2.73e-12,11;CL:0000838,1.57e-11,52;CL:0000084,2.86e-11,25;CL:0000827,2.86e-11,25;CL:0000542,2.97e-11,53;CL:0000051,2.97e-11,53;CL:0002097,7.28e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.37e-12;18!CL:0000051;3.10e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@UCKL1 | |||
}} |
Revision as of 09:39, 12 September 2013
Short description: | p3@UCKL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_UCKL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002yhj.2_5end |
EntrezGene: | UCKL1 |
HGNC: | 15938 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.97e-13 | 18 |
alpha-beta T cell | 8.97e-13 | 18 |
immature T cell | 8.97e-13 | 18 |
mature T cell | 8.97e-13 | 18 |
immature alpha-beta T cell | 8.97e-13 | 18 |
CD8-positive, alpha-beta T cell | 2.73e-12 | 11 |
lymphoid lineage restricted progenitor cell | 1.57e-11 | 52 |
T cell | 2.86e-11 | 25 |
pro-T cell | 2.86e-11 | 25 |
lymphocyte | 2.97e-11 | 53 |
common lymphoid progenitor | 2.97e-11 | 53 |
cortical cell of adrenal gland | 7.28e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.