FFCP PHASE1:Hg19::chr22:38093005..38093067,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11078|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17009|TSSclassifier=S|UniProt=Q9H2D6,C9JFG4|association_with_transcript=0bp_to_ENST00000406386,ENST00000417174_5end|coexpression_cluster_id=C10|description=CAGE_peak_3_at_TRIOBP_5end|id=chr22:38093005..38093067,+|ontology_enrichment_celltype=CL:0000055!1.18e-20!180;CL:0000393!2.18e-13!60;CL:0000211!2.18e-13!60;CL:0000183!8.91e-12!59;CL:0000680!1.75e-10!57;CL:0000056!1.75e-10!57;CL:0000355!1.75e-10!57;CL:0000187!4.86e-10!54;CL:0000192!3.59e-09!42;CL:0000514!3.59e-09!42;CL:0002319!6.29e-09!25;CL:0000133!2.36e-08!59;CL:0000359!5.52e-08!32;CL:0000047!2.92e-07!8;CL:0002321!6.74e-07!248|ontology_enrichment_celltype_v019=CL:0002319;1.72e-09;25!CL:0000540;3.50e-08;6!CL:0000404;3.50e-08;6!CL:0000359;6.69e-08;32!CL:1000497;7.46e-08;17!CL:0002518;7.46e-08;17!CL:0002321;3.51e-07;15!CL:0002322;4.00e-07;5|ontology_enrichment_celltype_v019_2=CL:0000393,1.16e-11,61;CL:0000211,1.16e-11,61;CL:0000047,3.42e-10,8;CL:0002319,1.39e-09,25;CL:0000540,3.70e-08,6;CL:0000031,3.70e-08,6;CL:0000404,3.70e-08,6;CL:0000359,5.93e-08,32;CL:1000497,7.64e-08,17;CL:0002518,7.64e-08,17;CL:0000187,1.08e-07,55;CL:0000192,1.73e-07,43;CL:0000514,1.73e-07,43;CL:0000133,2.07e-07,59;CL:0000680,2.10e-07,58;CL:0000056,2.10e-07,58;CL:0000355,2.10e-07,58;CL:0002322,4.10e-07,5;CL:0002321,5.21e-07,250|ontology_enrichment_development_v019=CL:0000031;3.50e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:3095,8.37e-07,22;DOID:2994,8.37e-07,22|ontology_enrichment_uberon=UBERON:0000914!1.13e-09!83;UBERON:0002329!1.13e-09!83;UBERON:0003077!1.13e-09!83;UBERON:0003059!1.13e-09!83;UBERON:0007282!1.13e-09!83;UBERON:0009618!1.13e-09!83;UBERON:0007285!1.13e-09!83;UBERON:0000481!1.77e-09!347;UBERON:0001134!1.89e-09!61;UBERON:0002036!1.89e-09!61;UBERON:0003082!1.89e-09!61;UBERON:0000475!2.34e-09!365;UBERON:0000073!2.45e-09!94;UBERON:0001016!2.45e-09!94;UBERON:0000119!2.54e-09!312;UBERON:0002385!5.38e-09!63;UBERON:0001015!5.38e-09!63;UBERON:0000383!5.38e-09!63;UBERON:0004290!6.69e-09!70;UBERON:0000483!1.08e-08!309;UBERON:0005743!3.34e-08!86;UBERON:0001017!1.30e-07!82;UBERON:0000486!4.01e-07!82;UBERON:0004121!6.19e-07!169|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.76e-07,78;UBERON:0001134,4.37e-07,62;UBERON:0002036,4.37e-07,62;UBERON:0003082,4.37e-07,62|phase1_expression=0,0,0,0,0,0,0,0,0,10.0750913965619,13.2582221914761,0.873765488520689,1.58260186937072,1.73272894144065,0.662794751455832,0,0.602694528023977,0,0,4.18611597461079,3.67201244239655,4.38836610069323,5.72471974262113,7.8018422291544,6.15158934014534,1.83392173795083,0.656804715599566,0.787107813136792,0,0,0,0,0.6024118375565,0,0.0774672005803016,0,0.587200878669695,0,0,0,0,0,0,0,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66221330396589,1.44575660953827,0.50133791063589,3.18662341713812,1.5905718941022,5.35298357332899,1.60709189178915,0.443458794925128,0.87834785693126,0.130979075497713,0,0.370784442784429,0,0,0,0,0.571994910780128,0,0.39752481473341,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0.81014194788176,0.357198913136319,0,0.900891843866578,1.53316637465883,0,0.916008719652036,0,0,1.3082821564276,1.49091585508596,0.25326102332916,0.529636723252875,0,1.06400514659507,1.68203280042692,2.1349799145941,1.97334038733728,0.311211035399766,1.75123873690594,0.490385709340376,1.66493170409425,0,1.87457145467037,0,0.570471821544449,0.149448680551801,0.469737994575059,1.61872944368132,1.40450806702248,1.02077085627447,5.15904132709426,0.619954687054593,0,0,0.910161361938026,0,5.38675564653012,12.8872075468123,0.831192346452549,1.31693286264251,0,0.150238058906597,0.340296549480063,2.15267562826634,1.70845911054854,1.05965950579781,1.20036438433761,0.721367704669072,0.772921620136887,0.37223371266318,0.168776332241266,1.07180705677318,3.78650661366172,1.65689817556139,1.45481451136931,1.42003837006646,1.30977727695932,2.20428770003634,0,0,0,14.3928973232923,17.758988955079,31.7209464033785,14.7198698121826,26.9983310436922,20.4387321082465,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0.8231480226628,0,0,0,0,0.441463099414651,0.245976877086227,8.23525489432923,3.29250856225877,0,0,0.277765335475589,4.56131627434455,10.3993478527958,12.9898207822746,9.5062932079563,0.352226082707465,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.411309970813294,0.901029173531752,0,1.68196626518041,2.61576041299968,1.39342743059805,0.387815147273333,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11078 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17009 | |||
|TSSclassifier=S | |||
|UniProt=Q9H2D6,C9JFG4 | |||
|association_with_transcript=0bp_to_ENST00000406386,ENST00000417174_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_TRIOBP_5end | |||
|id=chr22:38093005..38093067,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.18e-20!180;CL:0000393!2.18e-13!60;CL:0000211!2.18e-13!60;CL:0000183!8.91e-12!59;CL:0000680!1.75e-10!57;CL:0000056!1.75e-10!57;CL:0000355!1.75e-10!57;CL:0000187!4.86e-10!54;CL:0000192!3.59e-09!42;CL:0000514!3.59e-09!42;CL:0002319!6.29e-09!25;CL:0000133!2.36e-08!59;CL:0000359!5.52e-08!32;CL:0000047!2.92e-07!8;CL:0002321!6.74e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.72e-09;25!CL:0000540;3.50e-08;6!CL:0000404;3.50e-08;6!CL:0000359;6.69e-08;32!CL:1000497;7.46e-08;17!CL:0002518;7.46e-08;17!CL:0002321;3.51e-07;15!CL:0002322;4.00e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.16e-11,61;CL:0000211,1.16e-11,61;CL:0000047,3.42e-10,8;CL:0002319,1.39e-09,25;CL:0000540,3.70e-08,6;CL:0000031,3.70e-08,6;CL:0000404,3.70e-08,6;CL:0000359,5.93e-08,32;CL:1000497,7.64e-08,17;CL:0002518,7.64e-08,17;CL:0000187,1.08e-07,55;CL:0000192,1.73e-07,43;CL:0000514,1.73e-07,43;CL:0000133,2.07e-07,59;CL:0000680,2.10e-07,58;CL:0000056,2.10e-07,58;CL:0000355,2.10e-07,58;CL:0002322,4.10e-07,5;CL:0002321,5.21e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000031;3.50e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.37e-07,22;DOID:2994,8.37e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.13e-09!83;UBERON:0002329!1.13e-09!83;UBERON:0003077!1.13e-09!83;UBERON:0003059!1.13e-09!83;UBERON:0007282!1.13e-09!83;UBERON:0009618!1.13e-09!83;UBERON:0007285!1.13e-09!83;UBERON:0000481!1.77e-09!347;UBERON:0001134!1.89e-09!61;UBERON:0002036!1.89e-09!61;UBERON:0003082!1.89e-09!61;UBERON:0000475!2.34e-09!365;UBERON:0000073!2.45e-09!94;UBERON:0001016!2.45e-09!94;UBERON:0000119!2.54e-09!312;UBERON:0002385!5.38e-09!63;UBERON:0001015!5.38e-09!63;UBERON:0000383!5.38e-09!63;UBERON:0004290!6.69e-09!70;UBERON:0000483!1.08e-08!309;UBERON:0005743!3.34e-08!86;UBERON:0001017!1.30e-07!82;UBERON:0000486!4.01e-07!82;UBERON:0004121!6.19e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.76e-07,78;UBERON:0001134,4.37e-07,62;UBERON:0002036,4.37e-07,62;UBERON:0003082,4.37e-07,62 | |||
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| |||
|short_description=p3@TRIOBP | |||
}} |
Revision as of 11:54, 12 September 2013
Short description: | p3@TRIOBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TRIOBP_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000406386, ENST00000417174_5end |
EntrezGene: | TRIOBP |
HGNC: | 17009 |
UniProt: | Q9H2D6C9JFG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.16e-11 | 61 |
electrically active cell | 1.16e-11 | 61 |
neuronal stem cell | 3.42e-10 | 8 |
neural cell | 1.39e-09 | 25 |
neuron | 3.70e-08 | 6 |
neuroblast | 3.70e-08 | 6 |
electrically signaling cell | 3.70e-08 | 6 |
vascular associated smooth muscle cell | 5.93e-08 | 32 |
kidney cell | 7.64e-08 | 17 |
kidney epithelial cell | 7.64e-08 | 17 |
muscle cell | 1.08e-07 | 55 |
smooth muscle cell | 1.73e-07 | 43 |
smooth muscle myoblast | 1.73e-07 | 43 |
neurectodermal cell | 2.07e-07 | 59 |
muscle precursor cell | 2.10e-07 | 58 |
myoblast | 2.10e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.10e-07 | 58 |
embryonic stem cell | 4.10e-07 | 5 |
embryonic cell | 5.21e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.76e-07 | 78 |
skeletal muscle tissue | 4.37e-07 | 62 |
striated muscle tissue | 4.37e-07 | 62 |
myotome | 4.37e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.37e-07 | 22 |
germ cell cancer | 8.37e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.