FFCP PHASE1:Mm9::chr10:126704082..126704102,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:126704082..126704102,-|id=chr10:126704082..126704102,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.90e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.04e-12!71;UBERON:0003075!5.04e-12!71;UBERON:0007284!5.04e-12!71;UBERON:0004121!1.64e-11!102;UBERON:0000924!1.64e-11!102;UBERON:0006601!1.64e-11!102;UBERON:0000955!1.16e-09!50;UBERON:0006238!1.16e-09!50;UBERON:0002616!3.22e-09!49;UBERON:0000073!3.83e-09!75;UBERON:0001016!3.83e-09!75;UBERON:0001049!5.66e-09!52;UBERON:0005068!5.66e-09!52;UBERON:0006241!5.66e-09!52;UBERON:0007135!5.66e-09!52;UBERON:0001017!1.13e-08!73;UBERON:0005743!1.13e-08!73;UBERON:0000033!9.17e-08!63|ontology_enrichment_uberon_v019_2=UBERON:0002369,9.75e-14,7;UBERON:0006858,9.75e-14,7;UBERON:0000073,5.90e-09,54;UBERON:0001016,3.46e-08,75;UBERON:0001017,1.53e-07,73;UBERON:0004684,1.90e-07,3;UBERON:0002275,1.90e-07,3;UBERON:0010314,3.28e-07,92;UBERON:0001049,3.70e-07,52;UBERON:0005068,3.70e-07,52;UBERON:0006241,3.70e-07,52;UBERON:0007135,3.70e-07,52|phase1_expression=0,2.79180326111489,0.909998478779072,0.90739263392049,0.500895729946347,0,0,0,0.140788722151667,0,0.171217968225505,0.478632953972018,0,0,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0,0.639969691173627,1.37645568640302,0,0,1.50829862880122,0.190023419456374,0.252030129759931,0,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,1.65192076945513,0,0.218025156380447,0,0.194429899074283,0,1.43752564364972,0,0,0,0.771778308107841,0.573066879877513,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,1.10434270475807,0,0.0958454710182364,0.919218786610021,2.20231761998777,1.0214987046815,1.38245879930619,0.395658863190582,0.0914876436024097,0,0.837548997004143,1.12552522006336,0.916789486660861,0,0.711858403995515,0.186399445825301,1.21161909333094,0.226714680320357,0,0,0,0,0,0.448026887097336,0.140444420131752,0.170430322578058,1.03914401841148,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0.22836775943812,0,3.71105347662062,0.693941307064543,5.78484408793068,4.38169444786511,4.06951129492081,5.05631440683531,1.88499886994513,0.494389935468748,0.289198713839823,0,0,0.220841518460394,0,0,0.292780797011547,1.04723353406728,0,0.11981512450592,0.599902730993408,0.127070227073065,0.599162557619291,0.457500602818626,0.251308704225729,1.39059456153821,2.55715457330331,2.28566849015516,1.1356888414743,0.101839363850316,0.248813941220186,0.505445516867349,0,0,0.229902104433473,0,0.60281927134286,0.272145996605311,0.384341160854549,0.0937017245597288,0.517406741478031,0,0,0.351902248327898,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0.697601834251224,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0.438599962275997,0,0,1.89260953707715,0.308713837137853,1.32167513193519,0.264450566663544,0.213288250535234,0.696710015581316,0,0,0,0,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0,0.898819408654221,0.648414149624083,1.1948476395262,0,0.114248512609729,0,0,0.387904974335251,0.280543279561274,0.189709611372772,0.442830443938806,0.31399745568275,0.246794327843601,0.296452627087149,0.333690211432188,0,0.224862112384854,0,0,0.25462585178142,0,0.324270453550071,0,0,0,0,0.252578877947112,0,0.482443521363367,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.780534591431195,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0.54390568381871,0,0,2.72936002979246,2.81308047821288,0.327869890753351,0,0,0.390438744296638,0.646270193198397,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0.395287777946524,0.963963949265421,2.2710413633323,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.643011105094777,0.532020700926821,0.178368817602071,0.493647061806363,0.304464949114599,0,0.63549621259146,0.441056796109924,0.32977250588296,0.161464426695906,0.180938774784468,0.358117032009409,0.328281799490123,1.1659233465194,2.22510362412612,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0.26175594198403,0,0,0.56369293868419,0.598066184175915,0.165458490457098,0,0.129159823477731,0.506868376472335,0.352071715937262,0.2604087696879,0.629156066554265,0.724752362478018,0.576060012515731,0,0,0.102710957164827,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0,0,0.116876902181569,0,0,0,0,0.579568782096571,0,0.549454872801795,0,0,3.95326289831947,2.76195141904306,0.572895513439397,0.859265911718438,0.685082519770642,2.2661816921691,0,1.35096360967266,1.35942722695261,0.51776031175182,0.103787347584177,0,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0,0.320919209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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:126704082..126704102,- | |||
|id=chr10:126704082..126704102,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.90e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.04e-12!71;UBERON:0003075!5.04e-12!71;UBERON:0007284!5.04e-12!71;UBERON:0004121!1.64e-11!102;UBERON:0000924!1.64e-11!102;UBERON:0006601!1.64e-11!102;UBERON:0000955!1.16e-09!50;UBERON:0006238!1.16e-09!50;UBERON:0002616!3.22e-09!49;UBERON:0000073!3.83e-09!75;UBERON:0001016!3.83e-09!75;UBERON:0001049!5.66e-09!52;UBERON:0005068!5.66e-09!52;UBERON:0006241!5.66e-09!52;UBERON:0007135!5.66e-09!52;UBERON:0001017!1.13e-08!73;UBERON:0005743!1.13e-08!73;UBERON:0000033!9.17e-08!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,9.75e-14,7;UBERON:0006858,9.75e-14,7;UBERON:0000073,5.90e-09,54;UBERON:0001016,3.46e-08,75;UBERON:0001017,1.53e-07,73;UBERON:0004684,1.90e-07,3;UBERON:0002275,1.90e-07,3;UBERON:0010314,3.28e-07,92;UBERON:0001049,3.70e-07,52;UBERON:0005068,3.70e-07,52;UBERON:0006241,3.70e-07,52;UBERON:0007135,3.70e-07,52 | |||
|phase1_expression=0,2.79180326111489,0.909998478779072,0.90739263392049,0.500895729946347,0,0,0,0.140788722151667,0,0.171217968225505,0.478632953972018,0,0,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0,0.639969691173627,1.37645568640302,0,0,1.50829862880122,0.190023419456374,0.252030129759931,0,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,1.65192076945513,0,0.218025156380447,0,0.194429899074283,0,1.43752564364972,0,0,0,0.771778308107841,0.573066879877513,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,1.10434270475807,0,0.0958454710182364,0.919218786610021,2.20231761998777,1.0214987046815,1.38245879930619,0.395658863190582,0.0914876436024097,0,0.837548997004143,1.12552522006336,0.916789486660861,0,0.711858403995515,0.186399445825301,1.21161909333094,0.226714680320357,0,0,0,0,0,0.448026887097336,0.140444420131752,0.170430322578058,1.03914401841148,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0.22836775943812,0,3.71105347662062,0.693941307064543,5.78484408793068,4.38169444786511,4.06951129492081,5.05631440683531,1.88499886994513,0.494389935468748,0.289198713839823,0,0,0.220841518460394,0,0,0.292780797011547,1.04723353406728,0,0.11981512450592,0.599902730993408,0.127070227073065,0.599162557619291,0.457500602818626,0.251308704225729,1.39059456153821,2.55715457330331,2.28566849015516,1.1356888414743,0.101839363850316,0.248813941220186,0.505445516867349,0,0,0.229902104433473,0,0.60281927134286,0.272145996605311,0.384341160854549,0.0937017245597288,0.517406741478031,0,0,0.351902248327898,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0.697601834251224,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0.438599962275997,0,0,1.89260953707715,0.308713837137853,1.32167513193519,0.264450566663544,0.213288250535234,0.696710015581316,0,0,0,0,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0,0.898819408654221,0.648414149624083,1.1948476395262,0,0.114248512609729,0,0,0.387904974335251,0.280543279561274,0.189709611372772,0.442830443938806,0.31399745568275,0.246794327843601,0.296452627087149,0.333690211432188,0,0.224862112384854,0,0,0.25462585178142,0,0.324270453550071,0,0,0,0,0.252578877947112,0,0.482443521363367,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.780534591431195,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0.54390568381871,0,0,2.72936002979246,2.81308047821288,0.327869890753351,0,0,0.390438744296638,0.646270193198397,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0.395287777946524,0.963963949265421,2.2710413633323,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.643011105094777,0.532020700926821,0.178368817602071,0.493647061806363,0.304464949114599,0,0.63549621259146,0.441056796109924,0.32977250588296,0.161464426695906,0.180938774784468,0.358117032009409,0.328281799490123,1.1659233465194,2.22510362412612,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0.26175594198403,0,0,0.56369293868419,0.598066184175915,0.165458490457098,0,0.129159823477731,0.506868376472335,0.352071715937262,0.2604087696879,0.629156066554265,0.724752362478018,0.576060012515731,0,0,0.102710957164827,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0,0,0.116876902181569,0,0,0,0,0.579568782096571,0,0.549454872801795,0,0,3.95326289831947,2.76195141904306,0.572895513439397,0.859265911718438,0.685082519770642,2.2661816921691,0,1.35096360967266,1.35942722695261,0.51776031175182,0.103787347584177,0,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.347652977834566,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0,0,0.789209134313529,0.407412341537585,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.644613162144895,0.765153328275374,1.10295709559758,0.231867835620421 | |||
|short_description=p@chr10:126704082..126704102,- | |||
}} |
Revision as of 16:01, 12 September 2013
Short description: | p@chr10:126704082..126704102, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126704082..126704102, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.90e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 9.75e-14 | 7 |
adrenal/interrenal gland | 9.75e-14 | 7 |
regional part of nervous system | 5.90e-09 | 54 |
nervous system | 3.46e-08 | 75 |
central nervous system | 1.53e-07 | 73 |
raphe nuclei | 1.90e-07 | 3 |
reticular formation | 1.90e-07 | 3 |
structure with developmental contribution from neural crest | 3.28e-07 | 92 |
neural tube | 3.70e-07 | 52 |
neural rod | 3.70e-07 | 52 |
future spinal cord | 3.70e-07 | 52 |
neural keel | 3.70e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.