FFCP PHASE1:Hg19::chr2:216225743..216225761,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:216225743..216225761,-|id=chr2:216225743..216225761,-|ontology_enrichment_celltype=CL:0000181!1.83e-08!12;CL:0000417!1.83e-08!12;CL:0000668!1.83e-08!12;CL:0000414!1.83e-08!12;CL:0000412!1.83e-08!12;CL:0000182!1.83e-08!12;CL:0002592!2.73e-08!3;CL:0002541!4.84e-08!3|ontology_enrichment_celltype_v019=CL:0002541;3.85e-19;3!CL:0000182;1.82e-10;12!CL:0000197;6.94e-10;6!CL:0000098;6.94e-10;6!CL:0002167;6.94e-10;6!CL:0000349;5.24e-07;19|ontology_enrichment_celltype_v019_2=CL:0002541,3.52e-19,3;CL:0000182,2.25e-10,12;CL:0000197,7.10e-10,6;CL:0000098,7.10e-10,6;CL:0002167,7.10e-10,6;CL:0000349,5.08e-07,19|ontology_enrichment_development_v019=UBERON:0004161;2.24e-19;11!UBERON:0009497;1.89e-16;13!UBERON:0001041;2.85e-07;30|ontology_enrichment_disease=DOID:2394!3.53e-07!14|ontology_enrichment_disease_v019=DOID:5662;1.72e-14;1!DOID:3571;1.72e-14;1!DOID:3350;6.80e-08;2|ontology_enrichment_disease_v019_2=DOID:3571,2.75e-14,1;DOID:5662,3.15e-14,1;DOID:3350,8.60e-08,2|ontology_enrichment_uberon=UBERON:0002107!1.97e-08!19;UBERON:0006925!1.97e-08!19;UBERON:0008836!1.97e-08!19;UBERON:0001621!2.73e-08!3;UBERON:0000476!4.84e-08!3;UBERON:0000920!4.84e-08!3;UBERON:0008835!4.90e-07!22;UBERON:0003894!4.90e-07!22|ontology_enrichment_uberon_v019=UBERON:0003124;3.85e-19;3!UBERON:0000920;3.85e-19;3!UBERON:0002107;2.93e-17;19!UBERON:0006925;2.93e-17;19!UBERON:0007195;1.72e-14;1!UBERON:0002423;4.00e-13;25!UBERON:0005631;7.74e-13;10!UBERON:0000158;7.74e-13;10!UBERON:0002365;3.35e-10;31!UBERON:0002330;3.35e-10;31!UBERON:0002368;6.37e-10;33!UBERON:0002417;5.73e-07;58!UBERON:0000916;5.73e-07;58|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.52e-19,3;UBERON:0002107,3.79e-17,19;UBERON:0006925,3.79e-17,19;UBERON:0008836,3.79e-17,19;UBERON:0008835,8.15e-15,22;UBERON:0003894,8.15e-15,22;UBERON:0007195,2.41e-14,1;UBERON:0009854,3.58e-14,23;UBERON:0007499,4.86e-13,25;UBERON:0009497,4.86e-13,25;UBERON:0000015,4.86e-13,25;UBERON:0002423,4.86e-13,25;UBERON:0006235,4.86e-13,25;UBERON:0004161,4.86e-13,25;UBERON:0009856,1.54e-12,26;UBERON:0002365,1.63e-10,31;UBERON:0002330,1.63e-10,31;UBERON:0005631,2.39e-09,14;UBERON:0000158,2.39e-09,14;UBERON:0002368,2.63e-09,35;UBERON:0003124,9.33e-09,7;UBERON:0005172,1.99e-08,54;UBERON:0005173,1.99e-08,54;UBERON:0002417,1.50e-07,60;UBERON:0000916,1.50e-07,60;UBERON:0000949,3.18e-07,45|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,1.85372853138506,0.860509862246441,0,0.560677600142307,0,0,0.311211035399766,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.506328996723799,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,1.24782516918484,0.356857977594324,0,3.16281820480326,0.601892199455438,0,0,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0,2.14846762603287,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,1.29549549661284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.382838137483752,0,0,0.62962469366128,0,0.616067160352178,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0.808729926293264,1.58510321173008,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.811641507850816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3874448473769,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,3.19001159731919,0.0915975934018623,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,1.08089965062721,1.16495949527454,0.236349546921671,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0,0.41423905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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:216225743..216225761,- | |||
|id=chr2:216225743..216225761,- | |||
|ontology_enrichment_celltype=CL:0000181!1.83e-08!12;CL:0000417!1.83e-08!12;CL:0000668!1.83e-08!12;CL:0000414!1.83e-08!12;CL:0000412!1.83e-08!12;CL:0000182!1.83e-08!12;CL:0002592!2.73e-08!3;CL:0002541!4.84e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.85e-19;3!CL:0000182;1.82e-10;12!CL:0000197;6.94e-10;6!CL:0000098;6.94e-10;6!CL:0002167;6.94e-10;6!CL:0000349;5.24e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.52e-19,3;CL:0000182,2.25e-10,12;CL:0000197,7.10e-10,6;CL:0000098,7.10e-10,6;CL:0002167,7.10e-10,6;CL:0000349,5.08e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.24e-19;11!UBERON:0009497;1.89e-16;13!UBERON:0001041;2.85e-07;30 | |||
|ontology_enrichment_disease=DOID:2394!3.53e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:5662;1.72e-14;1!DOID:3571;1.72e-14;1!DOID:3350;6.80e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,2.75e-14,1;DOID:5662,3.15e-14,1;DOID:3350,8.60e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.97e-08!19;UBERON:0006925!1.97e-08!19;UBERON:0008836!1.97e-08!19;UBERON:0001621!2.73e-08!3;UBERON:0000476!4.84e-08!3;UBERON:0000920!4.84e-08!3;UBERON:0008835!4.90e-07!22;UBERON:0003894!4.90e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.85e-19;3!UBERON:0000920;3.85e-19;3!UBERON:0002107;2.93e-17;19!UBERON:0006925;2.93e-17;19!UBERON:0007195;1.72e-14;1!UBERON:0002423;4.00e-13;25!UBERON:0005631;7.74e-13;10!UBERON:0000158;7.74e-13;10!UBERON:0002365;3.35e-10;31!UBERON:0002330;3.35e-10;31!UBERON:0002368;6.37e-10;33!UBERON:0002417;5.73e-07;58!UBERON:0000916;5.73e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.52e-19,3;UBERON:0002107,3.79e-17,19;UBERON:0006925,3.79e-17,19;UBERON:0008836,3.79e-17,19;UBERON:0008835,8.15e-15,22;UBERON:0003894,8.15e-15,22;UBERON:0007195,2.41e-14,1;UBERON:0009854,3.58e-14,23;UBERON:0007499,4.86e-13,25;UBERON:0009497,4.86e-13,25;UBERON:0000015,4.86e-13,25;UBERON:0002423,4.86e-13,25;UBERON:0006235,4.86e-13,25;UBERON:0004161,4.86e-13,25;UBERON:0009856,1.54e-12,26;UBERON:0002365,1.63e-10,31;UBERON:0002330,1.63e-10,31;UBERON:0005631,2.39e-09,14;UBERON:0000158,2.39e-09,14;UBERON:0002368,2.63e-09,35;UBERON:0003124,9.33e-09,7;UBERON:0005172,1.99e-08,54;UBERON:0005173,1.99e-08,54;UBERON:0002417,1.50e-07,60;UBERON:0000916,1.50e-07,60;UBERON:0000949,3.18e-07,45 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,1.85372853138506,0.860509862246441,0,0.560677600142307,0,0,0.311211035399766,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.506328996723799,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,1.24782516918484,0.356857977594324,0,3.16281820480326,0.601892199455438,0,0,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0,2.14846762603287,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,1.29549549661284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.382838137483752,0,0,0.62962469366128,0,0.616067160352178,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0.808729926293264,1.58510321173008,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.811641507850816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3874448473769,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,3.19001159731919,0.0915975934018623,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,1.08089965062721,1.16495949527454,0.236349546921671,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0.378806010550178,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0.414706207840855,0.53168342911599,0.521745061811734,0.150257608997218,0,0.813741466409323,0,0.322231671127465,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,1.02892805662451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:216225743..216225761,- | |||
}} |
Revision as of 16:31, 12 September 2013
Short description: | p@chr2:216225743..216225761, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:216225743..216225761, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.52e-19 | 3 |
hepatocyte | 2.25e-10 | 12 |
receptor cell | 7.10e-10 | 6 |
sensory epithelial cell | 7.10e-10 | 6 |
olfactory epithelial cell | 7.10e-10 | 6 |
extraembryonic cell | 5.08e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.52e-19 | 3 |
liver | 3.79e-17 | 19 |
digestive gland | 3.79e-17 | 19 |
liver bud | 3.79e-17 | 19 |
hepatic diverticulum | 8.15e-15 | 22 |
liver primordium | 8.15e-15 | 22 |
stroma of bone marrow | 2.41e-14 | 1 |
digestive tract diverticulum | 3.58e-14 | 23 |
epithelial sac | 4.86e-13 | 25 |
epithelium of foregut-midgut junction | 4.86e-13 | 25 |
anatomical boundary | 4.86e-13 | 25 |
hepatobiliary system | 4.86e-13 | 25 |
foregut-midgut junction | 4.86e-13 | 25 |
septum transversum | 4.86e-13 | 25 |
sac | 1.54e-12 | 26 |
exocrine gland | 1.63e-10 | 31 |
exocrine system | 1.63e-10 | 31 |
extraembryonic membrane | 2.39e-09 | 14 |
membranous layer | 2.39e-09 | 14 |
endocrine gland | 2.63e-09 | 35 |
chorion | 9.33e-09 | 7 |
abdomen element | 1.99e-08 | 54 |
abdominal segment element | 1.99e-08 | 54 |
abdominal segment of trunk | 1.50e-07 | 60 |
abdomen | 1.50e-07 | 60 |
endocrine system | 3.18e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 2.75e-14 | 1 |
pleomorphic carcinoma | 3.15e-14 | 1 |
mesenchymal cell neoplasm | 8.60e-08 | 2 |
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