FFCP PHASE1:Mm9::chr10:79615156..79615193,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:79615156..79615193,+|id=chr10:79615156..79615193,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,1.99e-12,7;CL:0002453,3.67e-12,8;CL:0000680,2.88e-10,6;CL:0000187,2.88e-10,6;CL:0000056,2.88e-10,6;CL:0000333,1.45e-09,10;CL:0000095,1.45e-09,10;CL:0000243,1.45e-09,10;CL:0000123,1.45e-09,10;CL:0000125,1.45e-09,10;CL:0000030,1.45e-09,10;CL:0000339,1.45e-09,10;CL:0000192,2.33e-08,3;CL:0000359,2.33e-08,3;CL:0002539,2.33e-08,3;CL:0000514,2.33e-08,3;CL:0000128,1.30e-07,6;CL:0000126,1.30e-07,6;CL:0000127,1.30e-07,6;CL:0002605,8.43e-07,2;CL:0002604,8.43e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!8.73e-08!114;UBERON:0004111!1.62e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000055,6.69e-13,5;UBERON:0007500,6.69e-13,5;UBERON:0001981,6.69e-13,5;UBERON:0002049,6.69e-13,5;UBERON:0007798,6.69e-13,5;UBERON:0004537,6.69e-13,5;UBERON:0006965,6.69e-13,5;UBERON:0000947,1.11e-10,4;UBERON:0001637,1.11e-10,4;UBERON:0004573,1.11e-10,4;UBERON:0003509,1.11e-10,4;UBERON:0004571,1.11e-10,4;UBERON:0010191,1.11e-10,4;UBERON:0004572,1.11e-10,4;UBERON:0001135,2.33e-08,3;UBERON:0004237,2.33e-08,3;UBERON:0004695,2.33e-08,3;UBERON:0002111,2.33e-08,3;UBERON:0004178,2.33e-08,3;UBERON:0004535,4.79e-07,23;UBERON:0001009,4.79e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,1.17646297606203,0,0.485510353031154,1.38486499773135,1.4192770370732,4.22157529971868,0.782391344348039,2.18025156380447,7.90870257844099,7.19390626574849,2.65974201088189,0,0,0,0,0.771778308107841,2.29226751951005,1.03134418455488,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0,0,3.59520132622086,4.99483796918021,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.893811366596314,0.768032666281217,0,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.15279824777681,0.589257170947335,0,0.186399445825301,0.075726193333184,0.755715601067855,1.73918693221007,1.72084775396277,0,0.539703191637817,1.29955283489534,0.896053774194671,0.561777680527007,0.852151612890289,1.03914401841148,0.70667914902068,0,0,2.54805239706646,0,0,0,0,0.45673551887624,0.517875767294343,0,0.173485326766136,0,0.230615497256059,0,0,0.376999773989026,0.988779870937496,2.31358971071859,0,0.161766849947409,0,0,0,0,0.628340120440365,0.510914110417183,0,0,0,1.19832511523858,0.915001205637253,0.125654352112864,0.521472960576829,0,0.83115217823824,0.324482526135515,0.203678727700633,0.124406970610093,0.252722758433675,0.631325567659422,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.648550476366846,1.02339991197733,0.878200461164203,1.07365135008297,1.05144974282064,0,0.330418782983798,0,0,0,0.257734922644187,0,0,0,0,0.494096864172033,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.569128834118316,1.03327103585722,1.56998727841375,0.987177311374404,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0.538192240565737,0.964887042726734,0.923765950833023,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,1.60550589987792,0.586058432961016,0.163934945376675,0,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0.283880170416537,0.35613120733451,0.162886959353576,0.329940245945071,3.98235415019888,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,3.16255825724996,2.06271086496374,0,0,0,0,0.532020700926821,0.356737635204141,0,0.304464949114599,0.469343416127421,0,0,0,0.161464426695906,0,0.119372344003136,0,0,1.29797711407357,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0,0,0.218362563746178,0,0.247960367176008,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,3.17422537061296,0,0.179427713218951,0,0.965947970160952,0.750729901804728,1.28206136987086,0.214368379079066,0,0,0.460325236507177,1.14579102687879,1.20297227640581,0,0,0.675022500231806,1.35096360967266,0,0.51776031175182,0,0,0,0,0,0.367687016900028,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0,0,0.128050304809739,0.114870937911227,0,0,0.38581844092741,0,0,0.342869252385415,0,0,0,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0.309873682371932,0,0,0.701794825336225,0.214871054048298,0.191288332068843,1.10295709559758,2.31867835620421|short_description=p@chr10:79615156..79615193,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:79615156..79615193,+ | |||
|id=chr10:79615156..79615193,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.99e-12,7;CL:0002453,3.67e-12,8;CL:0000680,2.88e-10,6;CL:0000187,2.88e-10,6;CL:0000056,2.88e-10,6;CL:0000333,1.45e-09,10;CL:0000095,1.45e-09,10;CL:0000243,1.45e-09,10;CL:0000123,1.45e-09,10;CL:0000125,1.45e-09,10;CL:0000030,1.45e-09,10;CL:0000339,1.45e-09,10;CL:0000192,2.33e-08,3;CL:0000359,2.33e-08,3;CL:0002539,2.33e-08,3;CL:0000514,2.33e-08,3;CL:0000128,1.30e-07,6;CL:0000126,1.30e-07,6;CL:0000127,1.30e-07,6;CL:0002605,8.43e-07,2;CL:0002604,8.43e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!8.73e-08!114;UBERON:0004111!1.62e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,6.69e-13,5;UBERON:0007500,6.69e-13,5;UBERON:0001981,6.69e-13,5;UBERON:0002049,6.69e-13,5;UBERON:0007798,6.69e-13,5;UBERON:0004537,6.69e-13,5;UBERON:0006965,6.69e-13,5;UBERON:0000947,1.11e-10,4;UBERON:0001637,1.11e-10,4;UBERON:0004573,1.11e-10,4;UBERON:0003509,1.11e-10,4;UBERON:0004571,1.11e-10,4;UBERON:0010191,1.11e-10,4;UBERON:0004572,1.11e-10,4;UBERON:0001135,2.33e-08,3;UBERON:0004237,2.33e-08,3;UBERON:0004695,2.33e-08,3;UBERON:0002111,2.33e-08,3;UBERON:0004178,2.33e-08,3;UBERON:0004535,4.79e-07,23;UBERON:0001009,4.79e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,1.17646297606203,0,0.485510353031154,1.38486499773135,1.4192770370732,4.22157529971868,0.782391344348039,2.18025156380447,7.90870257844099,7.19390626574849,2.65974201088189,0,0,0,0,0.771778308107841,2.29226751951005,1.03134418455488,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0,0,3.59520132622086,4.99483796918021,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.893811366596314,0.768032666281217,0,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.15279824777681,0.589257170947335,0,0.186399445825301,0.075726193333184,0.755715601067855,1.73918693221007,1.72084775396277,0,0.539703191637817,1.29955283489534,0.896053774194671,0.561777680527007,0.852151612890289,1.03914401841148,0.70667914902068,0,0,2.54805239706646,0,0,0,0,0.45673551887624,0.517875767294343,0,0.173485326766136,0,0.230615497256059,0,0,0.376999773989026,0.988779870937496,2.31358971071859,0,0.161766849947409,0,0,0,0,0.628340120440365,0.510914110417183,0,0,0,1.19832511523858,0.915001205637253,0.125654352112864,0.521472960576829,0,0.83115217823824,0.324482526135515,0.203678727700633,0.124406970610093,0.252722758433675,0.631325567659422,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.648550476366846,1.02339991197733,0.878200461164203,1.07365135008297,1.05144974282064,0,0.330418782983798,0,0,0,0.257734922644187,0,0,0,0,0.494096864172033,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.569128834118316,1.03327103585722,1.56998727841375,0.987177311374404,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0.538192240565737,0.964887042726734,0.923765950833023,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,1.60550589987792,0.586058432961016,0.163934945376675,0,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0.283880170416537,0.35613120733451,0.162886959353576,0.329940245945071,3.98235415019888,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,3.16255825724996,2.06271086496374,0,0,0,0,0.532020700926821,0.356737635204141,0,0.304464949114599,0.469343416127421,0,0,0,0.161464426695906,0,0.119372344003136,0,0,1.29797711407357,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0,0,0.218362563746178,0,0.247960367176008,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,3.17422537061296,0,0.179427713218951,0,0.965947970160952,0.750729901804728,1.28206136987086,0.214368379079066,0,0,0.460325236507177,1.14579102687879,1.20297227640581,0,0,0.675022500231806,1.35096360967266,0,0.51776031175182,0,0,0,0,0,0.367687016900028,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0,0,0.128050304809739,0.114870937911227,0,0,0.38581844092741,0,0,0.342869252385415,0,0,0,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0.309873682371932,0,0,0.701794825336225,0.214871054048298,0.191288332068843,1.10295709559758,2.31867835620421 | |||
|short_description=p@chr10:79615156..79615193,+ | |||
}} |
Revision as of 17:34, 12 September 2013
Short description: | p@chr10:79615156..79615193, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:79615156..79615193, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.99e-12 | 7 |
oligodendrocyte precursor cell | 3.67e-12 | 8 |
muscle precursor cell | 2.88e-10 | 6 |
muscle cell | 2.88e-10 | 6 |
myoblast | 2.88e-10 | 6 |
migratory neural crest cell | 1.45e-09 | 10 |
neuron associated cell | 1.45e-09 | 10 |
glial cell (sensu Vertebrata) | 1.45e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 1.45e-09 | 10 |
glial cell | 1.45e-09 | 10 |
glioblast | 1.45e-09 | 10 |
glioblast (sensu Vertebrata) | 1.45e-09 | 10 |
smooth muscle cell | 2.33e-08 | 3 |
vascular associated smooth muscle cell | 2.33e-08 | 3 |
aortic smooth muscle cell | 2.33e-08 | 3 |
smooth muscle myoblast | 2.33e-08 | 3 |
oligodendrocyte | 1.30e-07 | 6 |
macroglial cell | 1.30e-07 | 6 |
astrocyte | 1.30e-07 | 6 |
astrocyte of the cerebral cortex | 8.43e-07 | 2 |
astrocyte of the hippocampus | 8.43e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vessel | 6.69e-13 | 5 |
epithelial tube open at both ends | 6.69e-13 | 5 |
blood vessel | 6.69e-13 | 5 |
vasculature | 6.69e-13 | 5 |
vascular system | 6.69e-13 | 5 |
blood vasculature | 6.69e-13 | 5 |
vascular cord | 6.69e-13 | 5 |
aorta | 1.11e-10 | 4 |
artery | 1.11e-10 | 4 |
systemic artery | 1.11e-10 | 4 |
arterial blood vessel | 1.11e-10 | 4 |
systemic arterial system | 1.11e-10 | 4 |
aortic system | 1.11e-10 | 4 |
arterial system | 1.11e-10 | 4 |
smooth muscle tissue | 2.33e-08 | 3 |
blood vessel smooth muscle | 2.33e-08 | 3 |
arterial system smooth muscle | 2.33e-08 | 3 |
artery smooth muscle tissue | 2.33e-08 | 3 |
aorta smooth muscle tissue | 2.33e-08 | 3 |
cardiovascular system | 4.79e-07 | 23 |
circulatory system | 4.79e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.