FFCP PHASE1:Mm9::chr10:84380402..84380437,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=237422|HGNC=|MCL_coexpression_id=2594|UniProt=Q80XE1|association_with_transcript=1bp_to_NM_001013441_5end|description=CAGE_peak_3_at_Ric8b_5end|id=chr10:84380402..84380437,+|ontology_enrichment_celltype=CL:0000117!4.56e-07!23;CL:0000337!4.56e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,9.45e-07,23;CL:0000337,9.45e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.48e-13!52;UBERON:0005068!5.48e-13!52;UBERON:0006241!5.48e-13!52;UBERON:0007135!5.48e-13!52;UBERON:0000955!1.15e-11!50;UBERON:0006238!1.15e-11!50;UBERON:0000033!2.00e-11!63;UBERON:0002616!3.27e-11!49;UBERON:0001017!9.59e-11!73;UBERON:0005743!9.59e-11!73;UBERON:0003080!6.18e-10!40;UBERON:0000073!1.11e-09!75;UBERON:0001016!1.11e-09!75;UBERON:0002346!1.12e-09!71;UBERON:0003075!1.12e-09!71;UBERON:0007284!1.12e-09!71;UBERON:0002780!1.52e-09!39;UBERON:0001890!1.52e-09!39;UBERON:0006240!1.52e-09!39;UBERON:0003056!3.44e-09!49;UBERON:0000153!7.98e-08!94;UBERON:0004121!1.79e-07!102;UBERON:0000924!1.79e-07!102;UBERON:0006601!1.79e-07!102;UBERON:0007811!2.93e-07!86;UBERON:0002020!4.82e-07!34;UBERON:0001894!8.73e-07!10;UBERON:0006222!8.73e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.65e-13,54;UBERON:0001049,1.11e-12,52;UBERON:0005068,1.11e-12,52;UBERON:0006241,1.11e-12,52;UBERON:0007135,1.11e-12,52;UBERON:0002346,5.73e-11,64;UBERON:0003075,5.73e-11,64;UBERON:0007284,5.73e-11,64;UBERON:0001017,9.20e-11,73;UBERON:0000955,2.98e-10,47;UBERON:0006238,2.98e-10,47;UBERON:0010371,4.46e-10,73;UBERON:0002616,8.46e-10,46;UBERON:0001016,8.99e-10,75;UBERON:0003080,1.96e-09,40;UBERON:0002780,4.90e-09,39;UBERON:0001890,4.90e-09,39;UBERON:0006240,4.90e-09,39;UBERON:0003056,1.46e-08,49;UBERON:0004121,2.59e-08,95;UBERON:0000924,2.59e-08,95;UBERON:0006601,2.59e-08,95;UBERON:0001894,5.04e-07,10;UBERON:0006222,5.04e-07,10|phase1_expression=3.36312578920067,2.44282785347553,1.36499771816861,1.81478526784098,3.50627010962443,1.6787927191189,0.700837921786577,1.80772652818207,2.53419699873,4.44722600011788,0.856089841127525,0.638177271962691,1.19840510951844,0.786783621770977,0.333109761815663,0.404950534779652,0,0.315462165358238,0,0.84877930359606,2.12608225377674,0.595745707205312,1.30599894569468,0.639969691173627,1.37645568640302,0.57423196411502,2.15380998079537,1.939241094173,0.570070258369122,0.504060259519861,0.443461021310609,1.90509202037889,1.23012957516914,0,2.59966457776147,1.32987716286794,0.816677425049476,2.92972141515835,1.5626706890476,1.57057123192139,2.35292595212406,0.683045484958446,1.94204141212461,1.6366586336825,1.82478476195126,2.56965453026354,0.782391344348039,0,0.439372365468944,0.972149495371417,0.279972843250725,0,2.01339127269284,2.17608642603403,2.68875039313971,0.257259436035947,0,1.03134418455488,3.64169629547276,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0.384218305321555,0.829516898467821,0.810035629990144,0.841299845405528,2.28520787523043,3.09215957332259,2.57230678351403,3.45043695665651,1.83843757322004,2.20231761998777,2.68143409978894,3.22573719838111,2.90149833006426,5.76372154695181,9.37644067002168,1.67509799400829,1.68828783009504,4.27835093775068,4.41942878210502,4.8406371471695,7.08317894136142,0.37863096666592,0.377857800533928,4.34796733052517,0.860423876981386,1.3599426674155,0,0.649776417447669,0,2.66844398250329,0.170430322578058,0.779358013808606,0,2.53518155598025,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0,0.79928715803342,0.776813650941515,0.593768556259299,1.21439728736295,0.304465478312141,1.38369298353635,1.20578112442098,1.41106448562846,0.753999547978053,1.23597483867187,2.60278842455841,0.884610551949874,1.13236794963186,1.98757366614354,0.969750506270444,0,4.39171195517321,3.35114730901528,0.255457055208591,0.838705871541442,0,0.508280908292259,2.84602214869163,28.8225379775735,9.42407640846483,5.56237824615285,6.39288643325826,6.44142938134636,10.5456820994042,1.73126918545538,2.11491850037158,1.76905930903572,7.15502310014011,1.30120442962704,0.919608417733892,1.44049703844279,1.20563854268572,1.15662048557257,1.15302348256365,1.12442069471675,18.6266426932091,3.23351989399263,3.9712276835242,2.63926686245923,2.41115305670332,1.66828349535359,1.0447564995665,0.823128545631774,3.18454826909589,1.40442637462647,0,1.13665399758237,1.24275463521301,1.17263029990548,1.98068267607116,0.946978942340841,0.983821158737019,2.00547246753592,1.16266972375204,0.268273401399619,0.467061369468678,1.48103864922132,1.47750717671186,2.1888578577381,1.75439984910399,0.219550115291051,1.07365135008297,0.630869845692382,1.13195073617213,0.991256348951394,0,2.13288250535234,1.85789337488351,1.67527699718721,1.61346819698674,0.889512175379481,1.52180500890047,0.949058123089023,0.988193728344065,0.754005626400808,0.397912944082302,0.779856348476481,1.79763881730844,0.216138049874694,0.796565093017469,1.13800740571849,1.82797620175566,5.63538678365402,2.03651327845314,2.71533482034676,2.45475369616115,1.89709611372772,1.77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| ||
|EntrezGene=237422 | |||
|HGNC= | |||
|MCL_coexpression_id=2594 | |||
|UniProt=Q80XE1 | |||
|association_with_transcript=1bp_to_NM_001013441_5end | |||
|description=CAGE_peak_3_at_Ric8b_5end | |||
|id=chr10:84380402..84380437,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.56e-07!23;CL:0000337!4.56e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.45e-07,23;CL:0000337,9.45e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.48e-13!52;UBERON:0005068!5.48e-13!52;UBERON:0006241!5.48e-13!52;UBERON:0007135!5.48e-13!52;UBERON:0000955!1.15e-11!50;UBERON:0006238!1.15e-11!50;UBERON:0000033!2.00e-11!63;UBERON:0002616!3.27e-11!49;UBERON:0001017!9.59e-11!73;UBERON:0005743!9.59e-11!73;UBERON:0003080!6.18e-10!40;UBERON:0000073!1.11e-09!75;UBERON:0001016!1.11e-09!75;UBERON:0002346!1.12e-09!71;UBERON:0003075!1.12e-09!71;UBERON:0007284!1.12e-09!71;UBERON:0002780!1.52e-09!39;UBERON:0001890!1.52e-09!39;UBERON:0006240!1.52e-09!39;UBERON:0003056!3.44e-09!49;UBERON:0000153!7.98e-08!94;UBERON:0004121!1.79e-07!102;UBERON:0000924!1.79e-07!102;UBERON:0006601!1.79e-07!102;UBERON:0007811!2.93e-07!86;UBERON:0002020!4.82e-07!34;UBERON:0001894!8.73e-07!10;UBERON:0006222!8.73e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.65e-13,54;UBERON:0001049,1.11e-12,52;UBERON:0005068,1.11e-12,52;UBERON:0006241,1.11e-12,52;UBERON:0007135,1.11e-12,52;UBERON:0002346,5.73e-11,64;UBERON:0003075,5.73e-11,64;UBERON:0007284,5.73e-11,64;UBERON:0001017,9.20e-11,73;UBERON:0000955,2.98e-10,47;UBERON:0006238,2.98e-10,47;UBERON:0010371,4.46e-10,73;UBERON:0002616,8.46e-10,46;UBERON:0001016,8.99e-10,75;UBERON:0003080,1.96e-09,40;UBERON:0002780,4.90e-09,39;UBERON:0001890,4.90e-09,39;UBERON:0006240,4.90e-09,39;UBERON:0003056,1.46e-08,49;UBERON:0004121,2.59e-08,95;UBERON:0000924,2.59e-08,95;UBERON:0006601,2.59e-08,95;UBERON:0001894,5.04e-07,10;UBERON:0006222,5.04e-07,10 | |||
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| |||
|short_description=p3@Ric8b | |||
}} |
Revision as of 17:48, 12 September 2013
Short description: | p3@Ric8b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ric8b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2594 |
Association with transcript: | 1bp_to_NM_001013441_5end |
EntrezGene: | Ric8b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.