FFCP PHASE1:Hg19::chr2:61245234..61245263,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=150962|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26505|TSSclassifier=S|UniProt=Q3MIT2|association_with_transcript=101bp_to_NM_144709,uc002sao.2,uc010ypk.1_5end|coexpression_cluster_id=C55|description=CAGE_peak_7_at_PUS10_5end|id=chr2:61245234..61245263,-|ontology_enrichment_celltype=CL:0000738!3.26e-19!140;CL:0000037!9.05e-18!172;CL:0000566!9.05e-18!172;CL:0000988!9.33e-18!182;CL:0002087!3.11e-16!119;CL:0002032!8.22e-15!165;CL:0000837!8.22e-15!165;CL:0002031!1.54e-14!124;CL:0000542!5.08e-13!53;CL:0000051!5.08e-13!53;CL:0000838!1.39e-12!52;CL:0000080!6.18e-07!6;CL:0000791!8.17e-07!18;CL:0000789!8.17e-07!18;CL:0002420!8.17e-07!18;CL:0002419!8.17e-07!18;CL:0000790!8.17e-07!18|ontology_enrichment_celltype_v019=CL:0000784;7.47e-30;3!CL:0000623;1.70e-13;3!CL:0000182;2.86e-13;12!CL:0000451;1.47e-08;10|ontology_enrichment_celltype_v019_2=CL:0000784,8.26e-30,3;CL:0000623,2.19e-13,3;CL:0000825,2.19e-13,3;CL:0000182,3.00e-13,12;CL:0000451,1.51e-08,10|ontology_enrichment_development_v019=UBERON:0004161;1.86e-14;11!UBERON:0009497;2.89e-12;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.58e-09!102;UBERON:0003061!1.58e-09!102;UBERON:0002193!2.37e-08!112|ontology_enrichment_uberon_v019=UBERON:0002108;1.86e-08;4!UBERON:0002107;1.92e-08;19!UBERON:0006925;1.92e-08;19|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.48e-08,4;UBERON:0002107,1.98e-08,19;UBERON:0006925,1.98e-08,19;UBERON:0008836,1.98e-08,19;UBERON:0008835,2.68e-07,22;UBERON:0003894,2.68e-07,22;UBERON:0009854,5.50e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.492603536699674,0.629686250509434,0.786728553697808,1.15148819429164,0.464448369948228,0,0,0,0,0,0.587200878669695,0,1.00272223735071,0.217010870715852,0,0,0,0,0,0.485168122375632,0.232429036905685,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.598390972864896,0.852449501065388,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0.422510572623884,0,0,0,0,0.16072558669708,0.285012743741249,0.19891667719909,0,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0.954053754535364,1.1384259382189,1.76171156811282,0.382273228125229,0,1.12101712596307,0.263384084775077,0.786839080455332,0.393010762749165,0.411202997999018,0.334372990781356,0.977766799900771,0.473447805734733,0,0.111410456885174,0.294605907474837,0.886135578334485,0.541607727530031,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0.593146252648242,0.535081656179426,0,0,0.766440987203842,0.34362744548263,0.253019692019503,0.318565414324097,0.651083453856419,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.868946423296794,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0.870648686496336,0.132957960518865,4.05434061319081,5.14795419702115,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,0,0,0,0,0,0,0,0,0.088048434013226,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,1.37921532141349,1.07813787429759,0.385029108839245,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.413536052245775,1.50999940573032,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0.648473311192717,0,0.79312517629427,0,0,0,0.185803175125719,0.432807638929335,0.0711418433484141,0,0,0.191505370132367,0,0.324621940274555,0,0.684704037099577,0,0,0,0,0,0,0,0.614481528616916,0.447352215784832,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,1.9882952955326,0,0,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,0,0,0.295547618953547,0,0,0.139423744278603,0.307801034015188,0,0,0.359030577639089,0,0,0,0,0,0.31396051279005,0,0.225595660617181,0.19606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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=150962 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26505 | |||
|TSSclassifier=S | |||
|UniProt=Q3MIT2 | |||
|association_with_transcript=101bp_to_NM_144709,uc002sao.2,uc010ypk.1_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_7_at_PUS10_5end | |||
|id=chr2:61245234..61245263,- | |||
|ontology_enrichment_celltype=CL:0000738!3.26e-19!140;CL:0000037!9.05e-18!172;CL:0000566!9.05e-18!172;CL:0000988!9.33e-18!182;CL:0002087!3.11e-16!119;CL:0002032!8.22e-15!165;CL:0000837!8.22e-15!165;CL:0002031!1.54e-14!124;CL:0000542!5.08e-13!53;CL:0000051!5.08e-13!53;CL:0000838!1.39e-12!52;CL:0000080!6.18e-07!6;CL:0000791!8.17e-07!18;CL:0000789!8.17e-07!18;CL:0002420!8.17e-07!18;CL:0002419!8.17e-07!18;CL:0000790!8.17e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000784;7.47e-30;3!CL:0000623;1.70e-13;3!CL:0000182;2.86e-13;12!CL:0000451;1.47e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,8.26e-30,3;CL:0000623,2.19e-13,3;CL:0000825,2.19e-13,3;CL:0000182,3.00e-13,12;CL:0000451,1.51e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.86e-14;11!UBERON:0009497;2.89e-12;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.58e-09!102;UBERON:0003061!1.58e-09!102;UBERON:0002193!2.37e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.86e-08;4!UBERON:0002107;1.92e-08;19!UBERON:0006925;1.92e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.48e-08,4;UBERON:0002107,1.98e-08,19;UBERON:0006925,1.98e-08,19;UBERON:0008836,1.98e-08,19;UBERON:0008835,2.68e-07,22;UBERON:0003894,2.68e-07,22;UBERON:0009854,5.50e-07,23 | |||
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| |||
|short_description=p7@PUS10 | |||
}} |
Revision as of 19:12, 12 September 2013
Short description: | p7@PUS10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_PUS10_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 101bp_to_NM_144709, uc002sao.2, uc010ypk.1_5end |
EntrezGene: | PUS10 |
HGNC: | 26505 |
UniProt: | Q3MIT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 8.26e-30 | 3 |
natural killer cell | 2.19e-13 | 3 |
pro-NK cell | 2.19e-13 | 3 |
hepatocyte | 3.00e-13 | 12 |
dendritic cell | 1.51e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.48e-08 | 4 |
liver | 1.98e-08 | 19 |
digestive gland | 1.98e-08 | 19 |
liver bud | 1.98e-08 | 19 |
hepatic diverticulum | 2.68e-07 | 22 |
liver primordium | 2.68e-07 | 22 |
digestive tract diverticulum | 5.50e-07 | 23 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.