FFCP PHASE1:Mm9::chr11:69714630..69714645,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2680|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:69714630..69714645,+|id=chr11:69714630..69714645,+|ontology_enrichment_celltype=CL:0000144!4.93e-10!121;CL:0000012!4.93e-10!121;CL:0002371!4.77e-09!118;CL:0000838!2.47e-08!12;CL:0000063!3.78e-08!66;CL:0000542!4.63e-08!13;CL:0000051!4.63e-08!13;CL:0000548!6.72e-08!115;CL:0000004!6.72e-08!115;CL:0000255!6.72e-08!115;CL:0000084!1.18e-07!11;CL:0000827!1.18e-07!11;CL:0002563!2.90e-07!9;CL:0002251!2.90e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,7.30e-21,9;CL:0002251,7.30e-21,9;CL:0002076,1.41e-17,15;CL:0000066,4.22e-16,25;CL:0000223,2.51e-15,20;CL:0000838,2.66e-15,12;CL:0000239,5.28e-14,6;CL:0000677,5.28e-14,6;CL:0000584,5.28e-14,6;CL:0000542,5.43e-14,13;CL:0000051,5.43e-14,13;CL:0000084,3.25e-13,11;CL:0000827,3.25e-13,11;CL:0000791,5.70e-13,9;CL:0000789,5.70e-13,9;CL:0002420,5.70e-13,9;CL:0002419,5.70e-13,9;CL:0000790,5.70e-13,9;CL:0000738,1.37e-12,17;CL:0002087,1.37e-12,17;CL:0000075,6.62e-12,7;CL:0002031,1.41e-11,25;CL:0000624,3.91e-11,8;CL:0000988,5.54e-10,32;CL:0002032,5.54e-10,32;CL:0000037,5.54e-10,32;CL:0000837,5.54e-10,32;CL:0002250,1.91e-08,3;CL:0002320,2.42e-07,46;CL:0000134,2.42e-07,46;CL:0000893,4.19e-07,6;CL:0002489,4.19e-07,6;CL:0000898,4.19e-07,6;CL:0000809,4.19e-07,6;CL:0000810,4.19e-07,6;CL:0000895,4.19e-07,6;CL:0000808,4.19e-07,6;CL:0000894,4.19e-07,6;CL:0000806,4.19e-07,6;CL:0000807,4.19e-07,6;CL:0000805,4.19e-07,6;CL:0002425,4.19e-07,6;CL:0002436,4.19e-07,6;CL:0002427,4.19e-07,6;CL:0002428,4.19e-07,6;CL:0002429,4.19e-07,6;CL:0002433,4.19e-07,6;CL:0002431,4.19e-07,6;CL:0002432,4.19e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!2.90e-07!9;UBERON:0004808!2.90e-07!9;UBERON:0001277!2.90e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.30e-21,9;UBERON:0004808,7.30e-21,9;UBERON:0001277,7.30e-21,9;UBERON:0000485,9.36e-17,11;UBERON:0001242,6.53e-14,13;UBERON:0001262,6.53e-14,13;UBERON:0004786,6.53e-14,13;UBERON:0000344,7.93e-12,15;UBERON:0002384,2.42e-07,46;UBERON:0000490,4.60e-07,66;UBERON:0003929,6.17e-07,55;UBERON:0004923,9.14e-07,24|phase1_expression=0,1.04692622291808,2.72999543633722,6.95667686005709,5.00895729946347,1.00727563147134,1.86890112476421,3.74457637980571,3.66050677594334,3.7450324211519,0.68487187290202,0.478632953972018,2.73921167889929,3.14713448708391,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0,1.44573593256819,0.695036658406197,1.04479915655574,0.319984845586813,0.45881856213434,2.29692785646008,0.86152399231815,1.07735616342945,0.380046838912748,0,0.221730510655305,2.54012269383853,1.84519436275371,0,7.51014211353314,1.82858109894342,4.69589519403449,2.09265815368454,0.7813353445238,2.09409497589519,5.88231488031014,2.73218193983378,0.485510353031154,0.377690453926732,0.304130793658544,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0.139986421625363,0,3.52343472721246,2.17608642603403,1.68046899571232,0,0.286533439938757,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0.630974884054146,0.571301968807607,0,0.367472397644862,0.670918297127655,0.919218786610021,0,0.127687338085188,0,0.791317726381163,0.731901148819277,0.52091337055676,0.279182999001381,0,0,0,0,0.186399445825301,0.075726193333184,0,6.08715426273523,0,0,0,0,0.448026887097336,0.280888840263504,0.340860645156116,0.519572009205738,0.35333957451034,0.563373679106722,0,0,0,2.16491041011214,0.760079596425296,1.51657333504435,0.22836775943812,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0,3.72783522436244,0,0.209446706813455,0.255457055208591,0.599075622529601,0,0.635351135365324,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0,0.497627882440372,0,0.420883711772948,0,0,0,0,0.136072998302656,0.384341160854549,0.0937017245597288,0.517406741478031,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0,1.40442637462647,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0,0,0,0.308713837137853,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.126473074248515,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0,0.509235257325564,0,0,0.238043640886014,0.195133647857799,0,0,0,0.327726629431476,0,0.144649058581512,1.50791283939272,0,0.491764273019036,0,0,0.35163505977661,0.163934945376675,0,0,0.780877488593277,0.430846795465598,0,0.891194696329576,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0,0.329940245945071,0,0.24278063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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2680 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:69714630..69714645,+ | |||
|id=chr11:69714630..69714645,+ | |||
|ontology_enrichment_celltype=CL:0000144!4.93e-10!121;CL:0000012!4.93e-10!121;CL:0002371!4.77e-09!118;CL:0000838!2.47e-08!12;CL:0000063!3.78e-08!66;CL:0000542!4.63e-08!13;CL:0000051!4.63e-08!13;CL:0000548!6.72e-08!115;CL:0000004!6.72e-08!115;CL:0000255!6.72e-08!115;CL:0000084!1.18e-07!11;CL:0000827!1.18e-07!11;CL:0002563!2.90e-07!9;CL:0002251!2.90e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.30e-21,9;CL:0002251,7.30e-21,9;CL:0002076,1.41e-17,15;CL:0000066,4.22e-16,25;CL:0000223,2.51e-15,20;CL:0000838,2.66e-15,12;CL:0000239,5.28e-14,6;CL:0000677,5.28e-14,6;CL:0000584,5.28e-14,6;CL:0000542,5.43e-14,13;CL:0000051,5.43e-14,13;CL:0000084,3.25e-13,11;CL:0000827,3.25e-13,11;CL:0000791,5.70e-13,9;CL:0000789,5.70e-13,9;CL:0002420,5.70e-13,9;CL:0002419,5.70e-13,9;CL:0000790,5.70e-13,9;CL:0000738,1.37e-12,17;CL:0002087,1.37e-12,17;CL:0000075,6.62e-12,7;CL:0002031,1.41e-11,25;CL:0000624,3.91e-11,8;CL:0000988,5.54e-10,32;CL:0002032,5.54e-10,32;CL:0000037,5.54e-10,32;CL:0000837,5.54e-10,32;CL:0002250,1.91e-08,3;CL:0002320,2.42e-07,46;CL:0000134,2.42e-07,46;CL:0000893,4.19e-07,6;CL:0002489,4.19e-07,6;CL:0000898,4.19e-07,6;CL:0000809,4.19e-07,6;CL:0000810,4.19e-07,6;CL:0000895,4.19e-07,6;CL:0000808,4.19e-07,6;CL:0000894,4.19e-07,6;CL:0000806,4.19e-07,6;CL:0000807,4.19e-07,6;CL:0000805,4.19e-07,6;CL:0002425,4.19e-07,6;CL:0002436,4.19e-07,6;CL:0002427,4.19e-07,6;CL:0002428,4.19e-07,6;CL:0002429,4.19e-07,6;CL:0002433,4.19e-07,6;CL:0002431,4.19e-07,6;CL:0002432,4.19e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!2.90e-07!9;UBERON:0004808!2.90e-07!9;UBERON:0001277!2.90e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.30e-21,9;UBERON:0004808,7.30e-21,9;UBERON:0001277,7.30e-21,9;UBERON:0000485,9.36e-17,11;UBERON:0001242,6.53e-14,13;UBERON:0001262,6.53e-14,13;UBERON:0004786,6.53e-14,13;UBERON:0000344,7.93e-12,15;UBERON:0002384,2.42e-07,46;UBERON:0000490,4.60e-07,66;UBERON:0003929,6.17e-07,55;UBERON:0004923,9.14e-07,24 | |||
|phase1_expression=0,1.04692622291808,2.72999543633722,6.95667686005709,5.00895729946347,1.00727563147134,1.86890112476421,3.74457637980571,3.66050677594334,3.7450324211519,0.68487187290202,0.478632953972018,2.73921167889929,3.14713448708391,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0,1.44573593256819,0.695036658406197,1.04479915655574,0.319984845586813,0.45881856213434,2.29692785646008,0.86152399231815,1.07735616342945,0.380046838912748,0,0.221730510655305,2.54012269383853,1.84519436275371,0,7.51014211353314,1.82858109894342,4.69589519403449,2.09265815368454,0.7813353445238,2.09409497589519,5.88231488031014,2.73218193983378,0.485510353031154,0.377690453926732,0.304130793658544,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0.139986421625363,0,3.52343472721246,2.17608642603403,1.68046899571232,0,0.286533439938757,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0.630974884054146,0.571301968807607,0,0.367472397644862,0.670918297127655,0.919218786610021,0,0.127687338085188,0,0.791317726381163,0.731901148819277,0.52091337055676,0.279182999001381,0,0,0,0,0.186399445825301,0.075726193333184,0,6.08715426273523,0,0,0,0,0.448026887097336,0.280888840263504,0.340860645156116,0.519572009205738,0.35333957451034,0.563373679106722,0,0,0,2.16491041011214,0.760079596425296,1.51657333504435,0.22836775943812,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0,3.72783522436244,0,0.209446706813455,0.255457055208591,0.599075622529601,0,0.635351135365324,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0,0.497627882440372,0,0.420883711772948,0,0,0,0,0.136072998302656,0.384341160854549,0.0937017245597288,0.517406741478031,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0,1.40442637462647,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0,0,0,0.308713837137853,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.126473074248515,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0,0.509235257325564,0,0,0.238043640886014,0.195133647857799,0,0,0,0.327726629431476,0,0.144649058581512,1.50791283939272,0,0.491764273019036,0,0,0.35163505977661,0.163934945376675,0,0,0.780877488593277,0.430846795465598,0,0.891194696329576,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0.517434735131018,0.428674070063185,0.532020700926821,0.178368817602071,0.493647061806363,0.304464949114599,0,0.21183207086382,0,0.8244312647074,0,0.120625849856312,0.238744688006273,0,0,0.370850604021019,0,0.206386867963223,0,0.376736914009382,0,0.228778173206523,0.339956859987711,1.53946597556024,0.967399816630967,0,0.474503990371703,0,0,0,0,0.134864346384821,0.0826534557253359,0.523511883968059,0.259229946583586,0,6.20062232552609,0.149516546043979,0.330916980914195,0,0,0,0,0.13020438484395,0.104859344425711,0.241584120826006,3.45636007509439,1.89606672376907,0.405450430580328,0.308132871494482,0.129920822977795,0,0.39736270956253,0.480781798079875,0.443068581523732,0.403865799792591,0,0.100826185136841,0.487289403698762,0.288635524920988,0.233753804363138,0.226730383615211,0.221985953374065,0.0897138566094757,0.335769232728157,0.579568782096571,0.187682475451182,0.183151624267265,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0.31136204275253,0,0.341467211508268,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0,0.187283014939765,0.192075457214608,0,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr11:69714630..69714645,+ | |||
}} |
Revision as of 20:40, 12 September 2013
Short description: | p@chr11:69714630..69714645, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69714630..69714645, + |
Coexpression cluster: | MCL_coexpression_mm9:2680 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 7.30e-21 | 9 |
gastrointestinal system epithelium | 7.30e-21 | 9 |
intestinal epithelium | 7.30e-21 | 9 |
simple columnar epithelium | 9.36e-17 | 11 |
intestinal mucosa | 6.53e-14 | 13 |
wall of intestine | 6.53e-14 | 13 |
gastrointestinal system mucosa | 6.53e-14 | 13 |
mucosa | 7.93e-12 | 15 |
connective tissue | 2.42e-07 | 46 |
unilaminar epithelium | 4.60e-07 | 66 |
gut epithelium | 6.17e-07 | 55 |
organ component layer | 9.14e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.