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FFCP PHASE1:Mm9::chr11:94937971..94938036,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16400|HGNC=|MCL_coexpression_id=2741|UniProt=Q62470|association_with_transcript=0bp_to_ENSMUST00000001548,ENSMUST00000073698,NM_013565,uc007kzw.1_5end|description=CAGE_peak_1_at_Itga3_5end|id=chr11:94937971..94938036,-|ontology_enrichment_celltype=CL:0002076!1.83e-07!15;CL:0000066!2.80e-07!25|ontology_enrichment_celltype_v019_2=CL:0002076,1.81e-07,15;CL:0000066,2.76e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.22e-12!43;UBERON:0005409!1.19e-11!59;UBERON:0004119!1.41e-08!130;UBERON:0000925!1.41e-08!130;UBERON:0006595!1.41e-08!130;UBERON:0001007!6.46e-08!128;UBERON:0001555!6.46e-08!128;UBERON:0007026!6.46e-08!128;UBERON:0005178!9.26e-08!17;UBERON:0005181!9.26e-08!17;UBERON:0002224!9.26e-08!17;UBERON:0000915!9.26e-08!17;UBERON:0008947!9.26e-08!17;UBERON:0003258!9.26e-08!17;UBERON:0000344!1.25e-07!15;UBERON:0004921!3.35e-07!126;UBERON:0004185!3.35e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.52e-14,31;UBERON:0005409,4.26e-12,47;UBERON:0004119,5.66e-08,118;UBERON:0000925,5.66e-08,118;UBERON:0006595,5.66e-08,118;UBERON:0005178,9.13e-08,17;UBERON:0005181,9.13e-08,17;UBERON:0002224,9.13e-08,17;UBERON:0000915,9.13e-08,17;UBERON:0008947,9.13e-08,17;UBERON:0003258,9.13e-08,17;UBERON:0000344,1.23e-07,15;UBERON:0001007,2.49e-07,116;UBERON:0001555,2.49e-07,116;UBERON:0007026,2.49e-07,116|phase1_expression=5.60520964866779,133.657581125875,146.054755844041,118.868435043584,134.740951355567,49.6922644859194,51.3947809310156,1.29123323441576,3.09735188733667,2.10658073689794,2.91070545983358,2.55270908785077,0.856003649656029,0.611942816932982,0.333109761815663,0.607425802169478,0,0.157731082679119,0.274228867211478,0.42438965179803,18.7945671233864,0.992909512008853,1.04479915655574,69.5967039151319,63.5463708556061,95.3225060430934,69.352681381611,75.1994602073753,53.3965808672411,48.3897849139067,54.545705621205,0,0,0,10.3986583110459,10.6390173029435,13.0668388007916,0,0,0,0,0,0,5.41356317294982,5.06884656097573,8.44315059943735,7.04152209913235,115.335307725256,240.556370094247,169.542871992775,53.1948402176378,163.877923376068,0.335565212115473,0.725362142011344,0.672187598284928,9.26133969729409,18.6246735960192,51.5672092277442,4.45096213891115,7.40587370980846,4.43681982454325,24.0579617769084,19.5644855144451,3.5995988691256,1.97773272513395,0.7104801149461,8.68840320503374,19.5951335713993,1.03689612308478,0.945041568321835,1.05162480675691,8.2838785477103,7.28866185140325,0.489963196859816,0.766763768145891,0.919218786610021,6.60695285996332,11.3641730895817,11.8277030607307,3.56092976871523,5.12330804173494,2.6045668527838,10.6089539620525,6.75315132038016,7.48711414106369,6.77645746589436,8.96941589034349,7.45597783301202,2.12033341332915,4.6854367266207,51.8857434776003,4.30211938490693,17.6792546764015,7.01614149129162,6.49776417447669,4.92829575807069,10.9546647702766,13.1231348385104,9.61208217030615,6.36011234118612,9.29566570526091,37.2146784501522,22.9324715735981,49.7746692207332,78.1532658050483,92.2229910329359,86.9502045425427,18.6119723942068,0.517875767294343,26.274258614474,6.7659277438793,10.0473607843007,10.1470818792666,8.89263579260473,13.4051126134703,17.2163230121655,100.361156900156,19.9547112549478,0,2.10296904931632,3.09178125844551,0.484875253135222,22.3670113461747,13.4679166625312,15.0801628905688,37.5521871156629,1.67741174308288,0.599902730993408,0.381210681219194,11.5338792341713,3.66000482254901,1.88481528169297,3.82413504423008,3.06858548796397,9.55825004973976,6.48965052271031,13.2391173005411,10.2013715900276,23.7559392927654,5.05060454127538,6.50602214813519,7.12696523743766,6.30217454318722,4.37043971723574,8.16437989815934,7.04625461566674,5.43470002446427,12.1590584247337,7.11374376678379,6.42960672570586,3.87092473160687,6.1374805079721,5.56094498451196,10.7958171621872,8.64284972913362,11.3449532086541,0,0,0,7.87077935634907,7.27030785941398,8.64297895012871,9.94327889457883,8.26409773339096,8.17615698303105,7.90615412151387,9.12129564758705,9.80828875884224,10.5318303944627,8.86504306027114,10.3768076218695,12.1345989563026,12.2948064562988,10.7365135008297,3.57492912559016,2.77842453424068,68.0662692946624,53.1545638993724,11.3042772783674,13.7019636397659,22.036335886078,38.9249202523051,45.5874989881984,59.1601697210059,46.5038480313621,82.3494773620054,68.8658472112738,74.2107640713493,67.0676459689773,57.5244421538702,36.5273304288233,38.0359831915841,10.0523987505133,11.7675967988021,20.2873924211545,12.2190796707189,17.0678188707511,23.565635483147,27.5078936490519,21.5510816050219,21.8228231699511,26.1601987514217,4.44678940630723,2.8363667971736,2.35870794135844,3.14806957338795,3.65148218499305,6.27060615356284,4.07401362850272,7.48009957372108,5.18832725680113,1.92192989231657,21.5652309791032,6.32639611036456,3.74445207737473,5.80931419278357,5.38192240565737,6.75420929908714,70.575718643643,7.20067364727842,14.8298128562244,14.428332290891,17.6017686216377,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|EntrezGene=16400
|HGNC=
|MCL_coexpression_id=2741
|UniProt=Q62470
|association_with_transcript=0bp_to_ENSMUST00000001548,ENSMUST00000073698,NM_013565,uc007kzw.1_5end
|description=CAGE_peak_1_at_Itga3_5end
|id=chr11:94937971..94938036,-
|ontology_enrichment_celltype=CL:0002076!1.83e-07!15;CL:0000066!2.80e-07!25
|ontology_enrichment_celltype_v019_2=CL:0002076,1.81e-07,15;CL:0000066,2.76e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!2.22e-12!43;UBERON:0005409!1.19e-11!59;UBERON:0004119!1.41e-08!130;UBERON:0000925!1.41e-08!130;UBERON:0006595!1.41e-08!130;UBERON:0001007!6.46e-08!128;UBERON:0001555!6.46e-08!128;UBERON:0007026!6.46e-08!128;UBERON:0005178!9.26e-08!17;UBERON:0005181!9.26e-08!17;UBERON:0002224!9.26e-08!17;UBERON:0000915!9.26e-08!17;UBERON:0008947!9.26e-08!17;UBERON:0003258!9.26e-08!17;UBERON:0000344!1.25e-07!15;UBERON:0004921!3.35e-07!126;UBERON:0004185!3.35e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.52e-14,31;UBERON:0005409,4.26e-12,47;UBERON:0004119,5.66e-08,118;UBERON:0000925,5.66e-08,118;UBERON:0006595,5.66e-08,118;UBERON:0005178,9.13e-08,17;UBERON:0005181,9.13e-08,17;UBERON:0002224,9.13e-08,17;UBERON:0000915,9.13e-08,17;UBERON:0008947,9.13e-08,17;UBERON:0003258,9.13e-08,17;UBERON:0000344,1.23e-07,15;UBERON:0001007,2.49e-07,116;UBERON:0001555,2.49e-07,116;UBERON:0007026,2.49e-07,116
|phase1_expression=5.60520964866779,133.657581125875,146.054755844041,118.868435043584,134.740951355567,49.6922644859194,51.3947809310156,1.29123323441576,3.09735188733667,2.10658073689794,2.91070545983358,2.55270908785077,0.856003649656029,0.611942816932982,0.333109761815663,0.607425802169478,0,0.157731082679119,0.274228867211478,0.42438965179803,18.7945671233864,0.992909512008853,1.04479915655574,69.5967039151319,63.5463708556061,95.3225060430934,69.352681381611,75.1994602073753,53.3965808672411,48.3897849139067,54.545705621205,0,0,0,10.3986583110459,10.6390173029435,13.0668388007916,0,0,0,0,0,0,5.41356317294982,5.06884656097573,8.44315059943735,7.04152209913235,115.335307725256,240.556370094247,169.542871992775,53.1948402176378,163.877923376068,0.335565212115473,0.725362142011344,0.672187598284928,9.26133969729409,18.6246735960192,51.5672092277442,4.45096213891115,7.40587370980846,4.43681982454325,24.0579617769084,19.5644855144451,3.5995988691256,1.97773272513395,0.7104801149461,8.68840320503374,19.5951335713993,1.03689612308478,0.945041568321835,1.05162480675691,8.2838785477103,7.28866185140325,0.489963196859816,0.766763768145891,0.919218786610021,6.60695285996332,11.3641730895817,11.8277030607307,3.56092976871523,5.12330804173494,2.6045668527838,10.6089539620525,6.75315132038016,7.48711414106369,6.77645746589436,8.96941589034349,7.45597783301202,2.12033341332915,4.6854367266207,51.8857434776003,4.30211938490693,17.6792546764015,7.01614149129162,6.49776417447669,4.92829575807069,10.9546647702766,13.1231348385104,9.61208217030615,6.36011234118612,9.29566570526091,37.2146784501522,22.9324715735981,49.7746692207332,78.1532658050483,92.2229910329359,86.9502045425427,18.6119723942068,0.517875767294343,26.274258614474,6.7659277438793,10.0473607843007,10.1470818792666,8.89263579260473,13.4051126134703,17.2163230121655,100.361156900156,19.9547112549478,0,2.10296904931632,3.09178125844551,0.484875253135222,22.3670113461747,13.4679166625312,15.0801628905688,37.5521871156629,1.67741174308288,0.599902730993408,0.381210681219194,11.5338792341713,3.66000482254901,1.88481528169297,3.82413504423008,3.06858548796397,9.55825004973976,6.48965052271031,13.2391173005411,10.2013715900276,23.7559392927654,5.05060454127538,6.50602214813519,7.12696523743766,6.30217454318722,4.37043971723574,8.16437989815934,7.04625461566674,5.43470002446427,12.1590584247337,7.11374376678379,6.42960672570586,3.87092473160687,6.1374805079721,5.56094498451196,10.7958171621872,8.64284972913362,11.3449532086541,0,0,0,7.87077935634907,7.27030785941398,8.64297895012871,9.94327889457883,8.26409773339096,8.17615698303105,7.90615412151387,9.12129564758705,9.80828875884224,10.5318303944627,8.86504306027114,10.3768076218695,12.1345989563026,12.2948064562988,10.7365135008297,3.57492912559016,2.77842453424068,68.0662692946624,53.1545638993724,11.3042772783674,13.7019636397659,22.036335886078,38.9249202523051,45.5874989881984,59.1601697210059,46.5038480313621,82.3494773620054,68.8658472112738,74.2107640713493,67.0676459689773,57.5244421538702,36.5273304288233,38.0359831915841,10.0523987505133,11.7675967988021,20.2873924211545,12.2190796707189,17.0678188707511,23.565635483147,27.5078936490519,21.5510816050219,21.8228231699511,26.1601987514217,4.44678940630723,2.8363667971736,2.35870794135844,3.14806957338795,3.65148218499305,6.27060615356284,4.07401362850272,7.48009957372108,5.18832725680113,1.92192989231657,21.5652309791032,6.32639611036456,3.74445207737473,5.80931419278357,5.38192240565737,6.75420929908714,70.575718643643,7.20067364727842,14.8298128562244,14.428332290891,17.6017686216377,29.8161138246432,38.8011134644202,59.5157625966286,42.876759196884,43.8500085504574,47.6769758285886,59.1546566123814,70.4554726012854,79.8462803369944,0,0,9.83528546038072,11.313406598494,8.50918126935297,11.4867452860359,6.06559297893699,2.7771801992481,11.3582958989852,10.9322848403059,6.46270193198397,4.06246956519338,4.23317480756549,3.96307143104365,6.47697122679831,9.9366991689846,8.30104333687699,2.24924921495265,11.7810270722863,15.313641915384,18.0804524882469,23.7556977080451,7.96470830039777,9.46844481004428,9.97667737983678,6.22396763194464,9.15435867930396,6.7635732547664,33.5956781118688,10.9060118843252,9.62542921638748,12.3254335594968,18.9753495434998,16.5016869197099,23.8307724027652,9.18311579559682,11.7716402242307,11.7885369267376,15.6059405605201,15.8748247665843,13.657568709976,37.4491887410957,31.2113371724735,64.820613684329,30.8739757276947,22.9191891588657,17.7610869365496,12.9672788595535,20.2932984805332,24.4569940620141,59.7535715091194,11.4963687246516,0.683483523191411,20.6386867963223,8.88933731374616,1.69531611304222,2.05041341581538,0.915112692826091,19.5475194492934,11.1961161858926,13.8199973804424,21.9574242143476,8.06656783631895,14.6390016331331,18.3609079397062,18.3997700492732,26.6402327770337,16.9929076444874,26.6970661992835,29.8401773861794,32.4037433229482,11.1841076355647,0.56369293868419,10.6156747691225,6.783798108741,7.97249872210595,7.10379029127521,5.23763989021412,11.7357238645754,7.55185432094911,3.98465508817701,0.966336483304024,1.72818003754719,5.68820017130721,6.08175645870493,4.93012594391171,3.24802057444488,4.29664069601955,5.36439657909415,4.32703618271888,2.95379054349154,3.23092639834072,2.13379058634,2.21817607301049,2.63136277997332,2.11666051608725,3.62318396762864,17.6849699219865,25.3063986846434,6.2799699626633,23.1680770582428,31.8762830153114,26.6509115140678,21.6118916635373,18.8644173589578,47.6493498833595,3.95326289831947,1.38097570952153,1.14579102687879,1.54667864109319,2.74033007908257,2.2661816921691,2.02506750069542,1.35096360967266,1.81256963593682,1.55328093525546,1.24544817101012,3.59122386060928,3.92687293234509,5.34834777550247,1.67690530102386,4.59608771125035,9.11211583986622,10.7138229764225,9.62757628775446,10.8659801058433,10.1391719956096,10.7517014590063,8.89594320963883,10.5641501468034,10.0512070672323,6.66811167796303,9.27074607558844,9.83837024364896,11.5384052224926,12.0703114510206,10.2860775715625,8.69631450180754,5.96090474868302,10.61028841416,9.88148494360971,8.71530461284268,10.0610385080025,7.89209134313529,9.09887562767274,9.53941861818155,7.82991119619549,10.9339975436875,7.36615877705441,9.29621047115796,11.1885834369062,8.99318080576605,12.1644436391612,13.9666185131394,6.69509162240952,6.39715115446595,4.17362104116759
|short_description=p1@Itga3
}}

Revision as of 21:35, 12 September 2013

Short description:p1@Itga3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Itga3_5end
Coexpression cluster:MCL_coexpression_mm9:2741
Association with transcript: 0bp_to_ENSMUST00000001548, ENSMUST00000073698, NM_013565, uc007kzw.1_5end
EntrezGene:Itga3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Itga3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5133.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6146.05
CD326+ enterocyte, pool1.CNhs13542.11848-124I3118.87
CD326+ enterocyte, pool2.CNhs13197.11849-124I4134.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I749.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I851.39
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D169.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D263.55
GP2+ M cell, pool1.CNhs13228.11845-124H995.32
GP2+ M cell, pool2.CNhs13231.11846-124I169.35
GP2+ M cell, pool3.CNhs13240.11847-124I275.20
Ileum epithelium, pool1.CNhs13199.10252-104B953.40
Ileum epithelium, pool2.CNhs13232.10253-104C148.39
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C854.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.64
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.07
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.44
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2115.34
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8240.56
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3169.54
Mouse Astrocytes, donor2.CNhs12078.11552-120C453.19
Mouse Astrocytes, donor3.CNhs12107.11633-122C4163.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.62
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C551.57
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C624.06
Mouse Meningeal cells, donor3.CNhs12109.11639-122D119.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C88.69
Mouse Microglia, donor2.CNhs12634.11736-123E819.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D92.12
Mouse Schwann, donor2.CNhs12573.11746-123F94.69
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G351.89
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.30
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H137.21
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G178.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G292.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G386.95
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.61
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D726.27
adrenal gland, embryo E14.CNhs11038.406-44C56.77
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I110.15
adrenal gland, embryo E18.CNhs11026.1262-18F58.89
adrenal gland, neonate N00.CNhs11191.1311-23C113.41
adrenal gland, neonate N25.CNhs11223.1377-27I317.22
amnion, adult pregnant day17.5.CNhs10488.583-22A8100.36
aorta, adult.CNhs10498.46-23H119.95
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B213.47
cerebellum, neonate N30.CNhs11135.1395-42I215.08
colon, adult.CNhs10468.36-18H737.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A411.53
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F29.56
diencephalon, neonate N30.CNhs11201.1388-42B26.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.20
epididymis, adult.CNhs10490.58-23B223.76
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C66.51
eyeball, embryo E14.CNhs10521.399-16E27.13
eyeball, embryo E15.CNhs10593.426-16C96.30
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C68.16
eyeball, neonate N01.CNhs11140.1532-43E77.05
eyeball, neonate N02.CNhs11205.1551-44G85.43
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E27.11
forelimb, embryo E12.CNhs10600.359-14H26.43
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A86.14
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B58.64
gonad, embryo E13.CNhs11044.1564-45I611.34
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E97.87
heart, embryo E12.CNhs11015.353-12F57.27
heart, embryo E13.CNhs11013.376-3I98.64
heart, embryo E14.CNhs10597.403-26D49.94
heart, embryo E15.CNhs11017.431-16C88.26
heart, embryo E16.CNhs11021.457-17C68.18
heart, embryo E17.CNhs11025.479-18E57.91
heart, embryo E18.CNhs11030.1283-20G39.12
heart, neonate N00.CNhs11213.639-21E39.81
heart, neonate N03.CNhs11221.1349-25I210.53
heart, neonate N10.CNhs11118.749-24G18.87
heart, neonate N16.CNhs11209.782-15G110.38
heart, neonate N20.CNhs11127.821-26I612.13
heart, neonate N25.CNhs11196.1351-25D312.29
heart, neonate N30.CNhs11202.1390-42D210.74
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I368.07
intestine, adult.CNhs10496.178-9A353.15
intestine, embryo E12.CNhs11019.1251-16I511.30
intestine, embryo E13.CNhs11010.381-16D513.70
intestine, embryo E15.CNhs10602.976-16D822.04
intestine, embryo E16.CNhs10585.463-22H438.92
intestine, embryo E17.CNhs10582.482-18D345.59
intestine, embryo E18.CNhs10526.1289-20F759.16
intestine, neonate N00.CNhs11126.644-26D146.50
intestine, neonate N01.CNhs11192.1322-23E982.35
intestine, neonate N06.CNhs11102.688-20B868.87
intestine, neonate N07.CNhs11095.720-20F274.21
intestine, neonate N10.CNhs11098.755-23A567.07
intestine, neonate N20.CNhs11187.827-18D157.52
intestine, neonate N25.CNhs11121.1352-25E336.53
intestine, neonate N30.CNhs11131.1384-42G138.04
kidney, embryo E14.CNhs10606.411-4I910.05
kidney, embryo E15.CNhs10997.434-16F811.77
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I212.22
kidney, embryo E18.CNhs11001.1288-20C717.07
kidney, neonate N00.CNhs11214.646-21G723.57
kidney, neonate N10.CNhs11206.758-6D527.51
kidney, neonate N20.CNhs11113.832-19I121.55
kidney, neonate N25.CNhs11122.1353-25F321.82
kidney, neonate N30.CNhs11203.1385-42H126.16
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F56.27
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F45.19
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A35.81
liver, neonate N25.CNhs11198.1368-26H15.38
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B170.58
lung, embryo E12.CNhs10522.354-16G27.20
lung, embryo E14.CNhs10604.404-26F814.83
lung, embryo E15.CNhs11020.432-17C514.43
lung, embryo E16.CNhs10998.458-17B617.60
lung, embryo E17.CNhs10605.480-44A629.82
lung, embryo E18.CNhs10583.1287-20I638.80
lung, neonate N00.CNhs11224.640-42C659.52
lung, neonate N06.CNhs11212.683-20E542.88
lung, neonate N07.CNhs11111.715-19A343.85
lung, neonate N10.CNhs11219.750-23E647.68
lung, neonate N20.CNhs11109.822-18A459.15
lung, neonate N25.CNhs11119.1359-25C770.46
lung, neonate N30.CNhs11133.1394-42H279.85
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B69.84
mammary gland, adult pregnant day19.CNhs10476.588-5H211.31
medulla oblongata, adult.CNhs10477.17-12C28.51
medulla oblongata, neonate N30.CNhs11200.1396-42A311.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I711.78
ovary, embryo E18.CNhs11040.505-44H715.31
ovary, neonate N00.CNhs11217.1299-22I418.08
oviduct, adult pregnant day01.CNhs10500.988-6G623.76
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F49.47
pancreas, embryo E15.CNhs11042.1556-45F29.98
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G39.15
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G933.60
pancreas, neonate N01.CNhs11138.1531-43D710.91
pancreas, neonate N02.CNhs11139.1539-43D89.63
pancreas, neonate N16.CNhs11136.787-43B612.33
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G823.83
pituitary gland, embryo E12.CNhs11018.346-16E69.18
pituitary gland, embryo E13.CNhs11009.370-44C711.77
pituitary gland, embryo E14.CNhs11037.398-44A511.79
pituitary gland, embryo E15.CNhs10592.427-16B915.61
pituitary gland, embryo E16.CNhs11036.449-43F615.87
pituitary gland, embryo E17.CNhs11039.1265-44F513.66
pituitary gland, neonate N00.CNhs11190.1308-22E937.45
placenta, adult pregnant day10.CNhs10472.539-13I731.21
placenta, adult pregnant day17.CNhs10464.577-18G364.82
prostate, adult.CNhs10470.859-1F830.87
skin, adult.CNhs10492.30-1C322.92
skin, neonate N00.CNhs11124.650-25G417.76
skin, neonate N03.CNhs11215.662-22H312.97
skin, neonate N06.CNhs11097.693-20I520.29
skin, neonate N10.CNhs11108.762-6C424.46
small intestine, neonate N16.CNhs11114.790-21I159.75
spinal cord, adult.CNhs10505.24-13C911.50
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C120.64
spleen, embryo E18.CNhs11011.1271-21F28.89
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.82
stomach, adult.CNhs10503.33-1H621.96
stomach, embryo E12.CNhs10588.356-43E38.07
stomach, embryo E15.CNhs10603.1252-16G814.64
stomach, embryo E16.CNhs11022.459-17D418.36
stomach, embryo E17.CNhs11006.1035-18D518.40
stomach, embryo E18.CNhs10999.1286-20C626.64
stomach, neonate N03.CNhs11193.1340-24B816.99
stomach, neonate N07.CNhs11210.718-18A926.70
stomach, neonate N25.CNhs11104.1355-25E429.84
stomach, neonate N30.CNhs11134.1386-42I132.40
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F510.62
testis, embryo E15.CNhs11034.443-27C56.78
testis, embryo E16.CNhs11033.470-26G57.97
testis, embryo E17.CNhs11029.486-18I57.10
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B711.74
testis, neonate N07.CNhs11222.726-26I47.55
testis, neonate N10.CNhs11204.763-44D93.98
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I24.93
thymus, embryo E16.CNhs11002.456-26C53.25
thymus, embryo E17.CNhs10581.478-18C14.30
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C43.23
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A22.63
thymus, neonate N25.CNhs11125.1362-25G72.12
thymus, neonate N30.CNhs11132.1393-42G23.62
tongue, adult.CNhs10499.32-1B417.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H325.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.28
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G523.17
urinary bladder, adult.CNhs10481.879-12E431.88
uterus, adult pregnant day19.CNhs10497.590-15F526.65
uterus, adult.CNhs10509.92-27E521.61
vagina, adult.CNhs10502.89-27D518.86
vesicular gland, adult.CNhs10491.51-27F847.65
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.87
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.84
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.70
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.06
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.30
whole body, embryo E17.5.CNhs10513.490-9F911.19
whole body, embryo E17.CNhs10517.475-3I58.99
whole body, embryo E18.CNhs10516.493-3B312.16
whole body, neonate N00.CNhs10525.657-19C213.97
whole body, neonate N01.CNhs10576.659-23C66.70
whole body, neonate N06.CNhs10515.692-21D16.40
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
endo-epithelial cell1.81e-0715
epithelial cell2.76e-0725

Uber anatomy
Ontology termp-valuen
intestine5.52e-1431
gastrointestinal system4.26e-1247
endoderm-derived structure5.66e-08118
endoderm5.66e-08118
presumptive endoderm5.66e-08118
thoracic cavity element9.13e-0817
thoracic segment organ9.13e-0817
thoracic cavity9.13e-0817
thoracic segment of trunk9.13e-0817
respiratory primordium9.13e-0817
endoderm of foregut9.13e-0817
mucosa1.23e-0715
digestive system2.49e-07116
digestive tract2.49e-07116
primitive gut2.49e-07116







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