FFCP PHASE1:Hg19::chr3:58196939..58196956,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1776|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2959|TSSclassifier=W|UniProt=Q13609,C9J9N0|association_with_transcript=0bp_to_ENST00000394549,ENST00000461914_5end|coexpression_cluster_id=C1157|description=CAGE_peak_7_at_DNASE1L3_5end|id=chr3:58196939..58196956,-|ontology_enrichment_celltype=CL:0002583!1.19e-08!2;CL:0002617!2.20e-08!2|ontology_enrichment_celltype_v019=CL:0002262;1.20e-08;2!CL:1000398;1.20e-08;2|ontology_enrichment_celltype_v019_2=CL:0002262,1.20e-08,2;CL:1000398,1.20e-08,2|ontology_enrichment_development_v019=UBERON:0000358;1.54e-15;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.17e-13!115;UBERON:0002106!1.66e-12!3;UBERON:0004854!1.66e-12!3;UBERON:0009034!1.66e-12!3;UBERON:0002095!1.66e-12!3;UBERON:0004782!1.66e-12!3;UBERON:0003281!1.66e-12!3;UBERON:0009664!1.66e-12!3;UBERON:0002296!1.66e-12!3;UBERON:0005602!1.66e-12!3;UBERON:0001179!1.66e-12!3;UBERON:0006293!1.66e-12!3;UBERON:0002417!2.18e-08!61;UBERON:0000916!2.18e-08!61;UBERON:0005172!4.20e-08!55;UBERON:0005173!4.20e-08!55;UBERON:0009569!3.26e-07!113;UBERON:0005057!7.27e-07!26|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-12;19!UBERON:0006925;1.91e-12;19!UBERON:0002423;1.60e-09;25!UBERON:0002368;3.18e-09;33!UBERON:0001281;1.20e-08;2!UBERON:0003497;1.20e-08;2!UBERON:0003909;1.20e-08;2!UBERON:0003835;1.20e-08;2!UBERON:0001905;2.67e-08;2!UBERON:0002757;2.67e-08;2!UBERON:0010134;2.67e-08;2!UBERON:0005408;2.67e-08;2!UBERON:0001899;2.67e-08;2!UBERON:0002365;1.17e-07;31!UBERON:0002330;1.17e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.88e-12,19;UBERON:0006925,1.88e-12,19;UBERON:0008836,1.88e-12,19;UBERON:0008835,8.61e-11,22;UBERON:0003894,8.61e-11,22;UBERON:0009854,2.47e-10,23;UBERON:0002368,3.19e-10,35;UBERON:0007499,1.59e-09,25;UBERON:0009497,1.59e-09,25;UBERON:0000015,1.59e-09,25;UBERON:0002423,1.59e-09,25;UBERON:0006235,1.59e-09,25;UBERON:0004161,1.59e-09,25;UBERON:0005172,2.63e-09,54;UBERON:0005173,2.63e-09,54;UBERON:0009856,3.61e-09,26;UBERON:0001281,1.20e-08,2;UBERON:0003497,1.20e-08,2;UBERON:0003909,1.20e-08,2;UBERON:0003835,1.20e-08,2;UBERON:0002417,2.41e-08,60;UBERON:0000916,2.41e-08,60;UBERON:0001905,3.08e-08,2;UBERON:0002757,3.08e-08,2;UBERON:0010134,3.08e-08,2;UBERON:0005408,3.08e-08,2;UBERON:0001899,3.08e-08,2;UBERON:0000949,6.13e-08,45;UBERON:0002365,1.01e-07,31;UBERON:0002330,1.01e-07,31|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.9826336448374,0,0,0,0,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0.680374821106063,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,4.84292754744295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0481834334015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,1.73372556058236,0.891727998294968,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22414914091781,5.30027555648885,0,0,0,0,1.17466153824464,0,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48722917110803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,2.35872595782966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38342104727473,0.45120521581504,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318235791390825,0.202117188958219,0.21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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1776 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2959 | |||
|TSSclassifier=W | |||
|UniProt=Q13609,C9J9N0 | |||
|association_with_transcript=0bp_to_ENST00000394549,ENST00000461914_5end | |||
|coexpression_cluster_id=C1157 | |||
|description=CAGE_peak_7_at_DNASE1L3_5end | |||
|id=chr3:58196939..58196956,- | |||
|ontology_enrichment_celltype=CL:0002583!1.19e-08!2;CL:0002617!2.20e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002262;1.20e-08;2!CL:1000398;1.20e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,1.20e-08,2;CL:1000398,1.20e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.54e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-13!115;UBERON:0002106!1.66e-12!3;UBERON:0004854!1.66e-12!3;UBERON:0009034!1.66e-12!3;UBERON:0002095!1.66e-12!3;UBERON:0004782!1.66e-12!3;UBERON:0003281!1.66e-12!3;UBERON:0009664!1.66e-12!3;UBERON:0002296!1.66e-12!3;UBERON:0005602!1.66e-12!3;UBERON:0001179!1.66e-12!3;UBERON:0006293!1.66e-12!3;UBERON:0002417!2.18e-08!61;UBERON:0000916!2.18e-08!61;UBERON:0005172!4.20e-08!55;UBERON:0005173!4.20e-08!55;UBERON:0009569!3.26e-07!113;UBERON:0005057!7.27e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-12;19!UBERON:0006925;1.91e-12;19!UBERON:0002423;1.60e-09;25!UBERON:0002368;3.18e-09;33!UBERON:0001281;1.20e-08;2!UBERON:0003497;1.20e-08;2!UBERON:0003909;1.20e-08;2!UBERON:0003835;1.20e-08;2!UBERON:0001905;2.67e-08;2!UBERON:0002757;2.67e-08;2!UBERON:0010134;2.67e-08;2!UBERON:0005408;2.67e-08;2!UBERON:0001899;2.67e-08;2!UBERON:0002365;1.17e-07;31!UBERON:0002330;1.17e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.88e-12,19;UBERON:0006925,1.88e-12,19;UBERON:0008836,1.88e-12,19;UBERON:0008835,8.61e-11,22;UBERON:0003894,8.61e-11,22;UBERON:0009854,2.47e-10,23;UBERON:0002368,3.19e-10,35;UBERON:0007499,1.59e-09,25;UBERON:0009497,1.59e-09,25;UBERON:0000015,1.59e-09,25;UBERON:0002423,1.59e-09,25;UBERON:0006235,1.59e-09,25;UBERON:0004161,1.59e-09,25;UBERON:0005172,2.63e-09,54;UBERON:0005173,2.63e-09,54;UBERON:0009856,3.61e-09,26;UBERON:0001281,1.20e-08,2;UBERON:0003497,1.20e-08,2;UBERON:0003909,1.20e-08,2;UBERON:0003835,1.20e-08,2;UBERON:0002417,2.41e-08,60;UBERON:0000916,2.41e-08,60;UBERON:0001905,3.08e-08,2;UBERON:0002757,3.08e-08,2;UBERON:0010134,3.08e-08,2;UBERON:0005408,3.08e-08,2;UBERON:0001899,3.08e-08,2;UBERON:0000949,6.13e-08,45;UBERON:0002365,1.01e-07,31;UBERON:0002330,1.01e-07,31 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.9826336448374,0,0,0,0,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0.680374821106063,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,4.84292754744295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0481834334015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,1.73372556058236,0.891727998294968,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22414914091781,5.30027555648885,0,0,0,0,1.17466153824464,0,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48722917110803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,2.35872595782966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38342104727473,0.45120521581504,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318235791390825,0.202117188958219,0.217716747896961,0,0.134704106029175,0,0,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p7@DNASE1L3 | |||
}} |
Revision as of 01:00, 13 September 2013
Short description: | p7@DNASE1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_DNASE1L3_5end |
Coexpression cluster: | C1157_Hepatic_neuroectodermal_liver_Hepatocyte_Adipocyte_spleen_kidney |
Association with transcript: | 0bp_to_ENST00000394549, ENST00000461914_5end |
EntrezGene: | DNASE1L3 |
HGNC: | 2959 |
UniProt: | Q13609C9J9N0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 1.20e-08 | 2 |
endothelial cell of hepatic sinusoid | 1.20e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 1.88e-12 | 19 |
digestive gland | 1.88e-12 | 19 |
liver bud | 1.88e-12 | 19 |
hepatic diverticulum | 8.61e-11 | 22 |
liver primordium | 8.61e-11 | 22 |
digestive tract diverticulum | 2.47e-10 | 23 |
endocrine gland | 3.19e-10 | 35 |
epithelial sac | 1.59e-09 | 25 |
epithelium of foregut-midgut junction | 1.59e-09 | 25 |
anatomical boundary | 1.59e-09 | 25 |
hepatobiliary system | 1.59e-09 | 25 |
foregut-midgut junction | 1.59e-09 | 25 |
septum transversum | 1.59e-09 | 25 |
abdomen element | 2.63e-09 | 54 |
abdominal segment element | 2.63e-09 | 54 |
sac | 3.61e-09 | 26 |
hepatic sinusoid | 1.20e-08 | 2 |
abdomen blood vessel | 1.20e-08 | 2 |
sinusoid | 1.20e-08 | 2 |
abdominal segment blood vessel | 1.20e-08 | 2 |
abdominal segment of trunk | 2.41e-08 | 60 |
abdomen | 2.41e-08 | 60 |
pineal body | 3.08e-08 | 2 |
regional part of epithalamus | 3.08e-08 | 2 |
secretory circumventricular organ | 3.08e-08 | 2 |
circumventricular organ | 3.08e-08 | 2 |
epithalamus | 3.08e-08 | 2 |
endocrine system | 6.13e-08 | 45 |
exocrine gland | 1.01e-07 | 31 |
exocrine system | 1.01e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.