FFCP PHASE1:Mm9::chr14:55196317..55196335,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16475|HGNC=|UniProt=Q91XC0|association_with_transcript=-64bp_to_ENSMUST00000054487,uc007twj.1_5end|description=CAGE_peak_3_at_Jub_5end|id=chr14:55196317..55196335,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!8.52e-09!17;UBERON:0005181!8.52e-09!17;UBERON:0002224!8.52e-09!17;UBERON:0000915!8.52e-09!17;UBERON:0008947!8.52e-09!17;UBERON:0003258!8.52e-09!17;UBERON:0000464!6.33e-08!57;UBERON:0002048!8.88e-07!14;UBERON:0000117!8.88e-07!14;UBERON:0000171!8.88e-07!14;UBERON:0000170!8.88e-07!14;UBERON:0005597!8.88e-07!14;UBERON:0000118!8.88e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.85e-10,17;UBERON:0005181,2.85e-10,17;UBERON:0002224,2.85e-10,17;UBERON:0000915,2.85e-10,17;UBERON:0008947,2.85e-10,17;UBERON:0003258,2.85e-10,17;UBERON:0002048,1.10e-07,14;UBERON:0000117,1.10e-07,14;UBERON:0000171,1.10e-07,14;UBERON:0000170,1.10e-07,14;UBERON:0005597,1.10e-07,14;UBERON:0000118,1.10e-07,14|phase1_expression=1.12104192973356,1.74487703819681,1.81999695755814,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.198581902401771,0.522399578277871,0.47997726838022,1.14704640533585,1.14846392823004,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0,0,0,0,1.6366586336825,1.92616169317078,1.83546752161682,0.782391344348039,5.23260375313072,6.15121311656521,4.6663175777828,2.09979632438044,2.87505128729943,0,0,0,2.57259436035947,1.14613375975503,2.06268836910977,0.809265843438391,0,0.633831403506179,1.35537812827653,0,0,0,0,1.49800055259202,4.61061966385865,0.933206510776299,1.08004750665353,0.841299845405528,0,0.662605622854841,0.367472397644862,1.15014565221884,0,0,0,0.46081959976873,0.659431438650969,0.548925861614458,1.04182674111352,0,0,0,0,0.142371680799103,0.559198337475902,0.227178579999552,0.0755715601067855,0.869593466105033,3.44169550792555,0.679971333707751,0,0.649776417447669,0,0.280888840263504,0.681721290312231,0.259786004602869,0,1.54927761754349,1.28326477414318,0,0,8.44315059943735,9.62767488805375,6.57181778519218,0.22836775943812,0,2.9688427812965,0.867426633830679,0.304465478312141,0.461230994512117,0.753613202763113,2.11659672844269,3.01599819191221,0.988779870937496,0.144599356919912,0,0.485300549842228,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0.457500602818626,0,0.173824320192276,0,0,0,3.25885964321012,0.373220911830279,0.758168275301024,0.420883711772948,2.21204753036596,2.75882525320168,1.62055916824814,1.35634336052144,0.884474488967262,1.15302348256365,0.843315521037559,0.258703370739016,1.72454394346274,1.70195472151037,2.63926686245923,1.97276159184817,0.278047249225598,1.39300866608867,1.02891068203972,1.59227413454795,0,0.257347907114715,0,2.07125772535502,0.703578179943289,1.98068267607116,1.42046841351126,0.393528463494808,1.07986979021165,0,0.804820204198858,1.40118410840603,1.31647879930784,0.492502392237286,0.810688095458557,0.438599962275997,0.219550115291051,0.402619256281115,0.210289948564127,0.617427674275707,0,0,1.49301775374664,1.16118335930219,1.41754207454303,0.80673409849337,0.22237804384487,0.380451252225118,0,1.64698954724011,0.754005626400808,0.795825888164603,1.55971269695296,0,0.432276099749388,0,1.13800740571849,1.02823661348756,0,0.610953983535943,1.93952487167626,1.82353131714828,1.20149420536089,0.738050739898011,0.784993639206874,0.246794327843601,0.889357881261447,0.500535317148282,0.589676985339609,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0.575392274901621,0.648540907100142,0.823684239564244,0,0.744281895337007,1.24815069245824,0,1.79397413521912,0,1.47802552133284,2.08440552947533,1.95557971730431,1.35796068620151,1.40814148973101,3.51763140627813,2.85652369063216,6.04914308359176,2.04925687338048,2.43611158613652,4.46473352240964,1.80249646187312,1.38147985492716,0.867894351489069,0,0,0,1.10374698521893,0,0.117211686592203,1.80328439914343,0.757412781613119,1.57754109708128,1.56175497718655,0.430846795465598,0.238968797952552,0.222798674082394,1.13230612315533,2.83367491172426,1.46127928955656,1.58115111178609,0,1.13552068166615,1.78065603667255,2.93196526836437,1.31976098378028,0,1.45668381692989,1.209294227859,0.754420319023592,0.295301892880773,0.922305443831782,1.29214146584111,0.727067458955011,1.42598951353889,0.316036757935816,0,0,0.340439605753788,1.44048875225048,1.68166288917581,0.643011105094777,0.886701168211368,2.49716344642899,1.48094118541909,2.43571959291679,0.23467170806371,0.63549621259146,0.220528398054962,1.31909002353184,0.484393280087717,1.26657142349127,2.02932984805332,1.14898629821543,0.582961673259701,0.18542530201051,0,1.857481811669,1.11116716421827,0.188368457004691,0.136694227721025,0,0,0.419854356970974,0.276399947608848,0,2.21435195506795,1.01659733563424,0.972048067396211,0.418176592028937,0.655087691238533,1.21377911746339,1.40510874733071,1.3087797099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| ||
|EntrezGene=16475 | |||
|HGNC= | |||
|UniProt=Q91XC0 | |||
|association_with_transcript=-64bp_to_ENSMUST00000054487,uc007twj.1_5end | |||
|description=CAGE_peak_3_at_Jub_5end | |||
|id=chr14:55196317..55196335,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!8.52e-09!17;UBERON:0005181!8.52e-09!17;UBERON:0002224!8.52e-09!17;UBERON:0000915!8.52e-09!17;UBERON:0008947!8.52e-09!17;UBERON:0003258!8.52e-09!17;UBERON:0000464!6.33e-08!57;UBERON:0002048!8.88e-07!14;UBERON:0000117!8.88e-07!14;UBERON:0000171!8.88e-07!14;UBERON:0000170!8.88e-07!14;UBERON:0005597!8.88e-07!14;UBERON:0000118!8.88e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.85e-10,17;UBERON:0005181,2.85e-10,17;UBERON:0002224,2.85e-10,17;UBERON:0000915,2.85e-10,17;UBERON:0008947,2.85e-10,17;UBERON:0003258,2.85e-10,17;UBERON:0002048,1.10e-07,14;UBERON:0000117,1.10e-07,14;UBERON:0000171,1.10e-07,14;UBERON:0000170,1.10e-07,14;UBERON:0005597,1.10e-07,14;UBERON:0000118,1.10e-07,14 | |||
|phase1_expression=1.12104192973356,1.74487703819681,1.81999695755814,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.198581902401771,0.522399578277871,0.47997726838022,1.14704640533585,1.14846392823004,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0,0,0,0,1.6366586336825,1.92616169317078,1.83546752161682,0.782391344348039,5.23260375313072,6.15121311656521,4.6663175777828,2.09979632438044,2.87505128729943,0,0,0,2.57259436035947,1.14613375975503,2.06268836910977,0.809265843438391,0,0.633831403506179,1.35537812827653,0,0,0,0,1.49800055259202,4.61061966385865,0.933206510776299,1.08004750665353,0.841299845405528,0,0.662605622854841,0.367472397644862,1.15014565221884,0,0,0,0.46081959976873,0.659431438650969,0.548925861614458,1.04182674111352,0,0,0,0,0.142371680799103,0.559198337475902,0.227178579999552,0.0755715601067855,0.869593466105033,3.44169550792555,0.679971333707751,0,0.649776417447669,0,0.280888840263504,0.681721290312231,0.259786004602869,0,1.54927761754349,1.28326477414318,0,0,8.44315059943735,9.62767488805375,6.57181778519218,0.22836775943812,0,2.9688427812965,0.867426633830679,0.304465478312141,0.461230994512117,0.753613202763113,2.11659672844269,3.01599819191221,0.988779870937496,0.144599356919912,0,0.485300549842228,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0.457500602818626,0,0.173824320192276,0,0,0,3.25885964321012,0.373220911830279,0.758168275301024,0.420883711772948,2.21204753036596,2.75882525320168,1.62055916824814,1.35634336052144,0.884474488967262,1.15302348256365,0.843315521037559,0.258703370739016,1.72454394346274,1.70195472151037,2.63926686245923,1.97276159184817,0.278047249225598,1.39300866608867,1.02891068203972,1.59227413454795,0,0.257347907114715,0,2.07125772535502,0.703578179943289,1.98068267607116,1.42046841351126,0.393528463494808,1.07986979021165,0,0.804820204198858,1.40118410840603,1.31647879930784,0.492502392237286,0.810688095458557,0.438599962275997,0.219550115291051,0.402619256281115,0.210289948564127,0.617427674275707,0,0,1.49301775374664,1.16118335930219,1.41754207454303,0.80673409849337,0.22237804384487,0.380451252225118,0,1.64698954724011,0.754005626400808,0.795825888164603,1.55971269695296,0,0.432276099749388,0,1.13800740571849,1.02823661348756,0,0.610953983535943,1.93952487167626,1.82353131714828,1.20149420536089,0.738050739898011,0.784993639206874,0.246794327843601,0.889357881261447,0.500535317148282,0.589676985339609,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0.575392274901621,0.648540907100142,0.823684239564244,0,0.744281895337007,1.24815069245824,0,1.79397413521912,0,1.47802552133284,2.08440552947533,1.95557971730431,1.35796068620151,1.40814148973101,3.51763140627813,2.85652369063216,6.04914308359176,2.04925687338048,2.43611158613652,4.46473352240964,1.80249646187312,1.38147985492716,0.867894351489069,0,0,0,1.10374698521893,0,0.117211686592203,1.80328439914343,0.757412781613119,1.57754109708128,1.56175497718655,0.430846795465598,0.238968797952552,0.222798674082394,1.13230612315533,2.83367491172426,1.46127928955656,1.58115111178609,0,1.13552068166615,1.78065603667255,2.93196526836437,1.31976098378028,0,1.45668381692989,1.209294227859,0.754420319023592,0.295301892880773,0.922305443831782,1.29214146584111,0.727067458955011,1.42598951353889,0.316036757935816,0,0,0.340439605753788,1.44048875225048,1.68166288917581,0.643011105094777,0.886701168211368,2.49716344642899,1.48094118541909,2.43571959291679,0.23467170806371,0.63549621259146,0.220528398054962,1.31909002353184,0.484393280087717,1.26657142349127,2.02932984805332,1.14898629821543,0.582961673259701,0.18542530201051,0,1.857481811669,1.11116716421827,0.188368457004691,0.136694227721025,0,0,0.419854356970974,0.276399947608848,0,2.21435195506795,1.01659733563424,0.972048067396211,0.418176592028937,0.655087691238533,1.21377911746339,1.40510874733071,1.30877970992015,0.129614973291793,0.621339313086926,2.81846469342095,1.04661582230785,2.15096037594227,4.27792614356905,1.80823752868824,1.35164900392623,2.69921648885234,3.9061315453185,1.67774951081137,0.724752362478018,0.288030006257865,0.316011120628178,0.810900861160657,1.33524244314275,1.29920822977795,1.07416017400489,0.596044064343795,0.480781798079875,0.443068581523732,0.504832249740738,0.762068066549998,0.201652370273681,0.0974578807397524,0.288635524920988,0.233753804363138,1.36038230169127,1.10992976687032,0.269141569828427,1.00730769818447,1.35232715822533,3.75364950902364,0.73260649706906,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0.51776031175182,1.764384908931,2.79317411380722,1.19513524027894,1.45864030240976,0.628839487883947,0.919217542250071,0.44449345560323,0.824140228955577,0.962757628775446,0.505394423527595,0.50695859978048,0.754505365544305,0.561849044819294,1.34452820050225,0.976402972245426,0.476293691283074,1.27472758539341,1.35036454324594,1.23625770240992,0.588795680537589,0.342869252385415,0.887379030796687,1.66905332963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| |||
|short_description=p3@Jub | |||
}} | |||
Revision as of 02:25, 13 September 2013
| Short description: | p3@Jub |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Jub_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -64bp_to_ENSMUST00000054487, uc007twj.1_5end |
| EntrezGene: | Jub |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| thoracic cavity element | 2.85e-10 | 17 |
| thoracic segment organ | 2.85e-10 | 17 |
| thoracic cavity | 2.85e-10 | 17 |
| thoracic segment of trunk | 2.85e-10 | 17 |
| respiratory primordium | 2.85e-10 | 17 |
| endoderm of foregut | 2.85e-10 | 17 |
| lung | 1.10e-07 | 14 |
| respiratory tube | 1.10e-07 | 14 |
| respiration organ | 1.10e-07 | 14 |
| pair of lungs | 1.10e-07 | 14 |
| lung primordium | 1.10e-07 | 14 |
| lung bud | 1.10e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
