FFCP PHASE1:Hg19::chr4:48988259..48988270,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80157|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26133|TSSclassifier=S|UniProt=Q9H720|association_with_transcript=0bp_to_ENST00000226432,NM_025087,uc003gyv.2_5end|coexpression_cluster_id=C4421|description=CAGE_peak_3_at_CWH43_5end|id=chr4:48988259..48988270,+|ontology_enrichment_celltype=CL:0002159!1.18e-11!13;CL:0000622!7.20e-11!5;CL:0000154!4.64e-09!6;CL:0002076!2.11e-08!43;CL:0002368!3.70e-08!13;CL:0000317!1.12e-07!2;CL:1000448!1.12e-07!2;CL:0002308!1.12e-07!2;CL:0002140!1.12e-07!2;CL:0000575!2.09e-07!2;CL:0001014!2.63e-07!2;CL:0001016!2.63e-07!2;CL:0000362!5.22e-07!8|ontology_enrichment_celltype_v019=CL:0002231;7.49e-12;3!CL:0002621;1.77e-11;3!CL:0000362;1.45e-08;9!CL:0000312;2.25e-07;5!CL:0000622;2.25e-07;5|ontology_enrichment_celltype_v019_2=CL:0002231,6.04e-12,3;CL:0002621,1.59e-11,3;CL:0000362,1.84e-08,9;CL:0000312,2.59e-07,5;CL:0000622,2.59e-07,5|ontology_enrichment_development_v019=UBERON:0005754;1.32e-09;1!UBERON:0009143;3.12e-09;1!UBERON:0001045;3.12e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006554!3.24e-11!44;UBERON:0000161!5.06e-11!35;UBERON:0001008!6.77e-11!45;UBERON:0006947!7.41e-11!3;UBERON:0004054!7.41e-11!3;UBERON:0003064!5.51e-10!37;UBERON:0003101!1.52e-08!22;UBERON:0000079!1.52e-08!22;UBERON:0005904!3.09e-08!4;UBERON:0000341!4.67e-08!2;UBERON:0004119!5.43e-08!169;UBERON:0000925!5.43e-08!169;UBERON:0006595!5.43e-08!169;UBERON:0003102!6.26e-08!95;UBERON:0002419!1.12e-07!2;UBERON:0007771!1.12e-07!2;UBERON:0003297!1.12e-07!2;UBERON:0001821!1.12e-07!2;UBERON:0003487!1.12e-07!2;UBERON:0001820!1.12e-07!2;UBERON:0005089!1.12e-07!2;UBERON:0005088!1.12e-07!2;UBERON:0003937!5.80e-07!12;UBERON:0005399!5.80e-07!12;UBERON:0004876!6.65e-07!20;UBERON:0000166!7.80e-07!21|ontology_enrichment_uberon_v019=UBERON:0000341;4.13e-17;2!UBERON:0006947;1.01e-11;3!UBERON:0004054;1.01e-11;3!UBERON:0001949;1.77e-11;3!UBERON:0003937;5.02e-11;12!UBERON:0005399;5.02e-11;12!UBERON:0005795;8.31e-10;1!UBERON:0000998;1.32e-09;1!UBERON:0006868;1.32e-09;1!UBERON:0007029;3.12e-09;1!UBERON:0001154;3.12e-09;1!UBERON:0001000;3.12e-09;1!UBERON:0001153;3.12e-09;1!UBERON:0009854;3.12e-09;1!UBERON:0005352;3.12e-09;1!UBERON:0003101;5.08e-09;22!UBERON:0000079;5.08e-09;22!UBERON:0005904;5.18e-09;4!UBERON:0010371;8.39e-09;31!UBERON:0001003;1.05e-08;15!UBERON:0007376;1.05e-08;15!UBERON:0002367;3.85e-07;11!UBERON:0010147;3.85e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0000341,5.51e-17,2;UBERON:0006947,9.83e-12,3;UBERON:0004054,9.83e-12,3;UBERON:0001949,1.59e-11,3;UBERON:0003937,5.51e-11,12;UBERON:0005399,5.51e-11,12;UBERON:0000161,4.41e-10,36;UBERON:0000998,1.56e-09,1;UBERON:0006868,1.56e-09,1;UBERON:0007029,1.69e-09,1;UBERON:0001154,2.16e-09,1;UBERON:0001153,2.16e-09,1;UBERON:0001045,2.16e-09,1;UBERON:0001000,2.55e-09,1;UBERON:0005352,2.55e-09,1;UBERON:0005904,5.09e-09,4;UBERON:0003101,5.18e-09,22;UBERON:0000079,5.18e-09,22;UBERON:0001003,1.08e-08,15;UBERON:0007376,1.08e-08,15;UBERON:0007383,1.08e-08,15;UBERON:0003102,7.06e-08,99;UBERON:0002530,1.24e-07,59;UBERON:0002367,3.98e-07,11;UBERON:0010147,3.98e-07,11;UBERON:0009846,3.98e-07,11;UBERON:0003353,3.98e-07,11;UBERON:0004902,3.98e-07,11;UBERON:0003820,3.98e-07,11;UBERON:0009847,3.98e-07,11;UBERON:0001046,5.88e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.36373060295417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,1.09750285408626,0,2.81481122752566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,4.69613043573071,0,0,0,0.451199612907412,0.385076685522074,0,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0.382838137483752,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.88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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80157 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26133 | |||
|TSSclassifier=S | |||
|UniProt=Q9H720 | |||
|association_with_transcript=0bp_to_ENST00000226432,NM_025087,uc003gyv.2_5end | |||
|coexpression_cluster_id=C4421 | |||
|description=CAGE_peak_3_at_CWH43_5end | |||
|id=chr4:48988259..48988270,+ | |||
|ontology_enrichment_celltype=CL:0002159!1.18e-11!13;CL:0000622!7.20e-11!5;CL:0000154!4.64e-09!6;CL:0002076!2.11e-08!43;CL:0002368!3.70e-08!13;CL:0000317!1.12e-07!2;CL:1000448!1.12e-07!2;CL:0002308!1.12e-07!2;CL:0002140!1.12e-07!2;CL:0000575!2.09e-07!2;CL:0001014!2.63e-07!2;CL:0001016!2.63e-07!2;CL:0000362!5.22e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002231;7.49e-12;3!CL:0002621;1.77e-11;3!CL:0000362;1.45e-08;9!CL:0000312;2.25e-07;5!CL:0000622;2.25e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,6.04e-12,3;CL:0002621,1.59e-11,3;CL:0000362,1.84e-08,9;CL:0000312,2.59e-07,5;CL:0000622,2.59e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.32e-09;1!UBERON:0009143;3.12e-09;1!UBERON:0001045;3.12e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!3.24e-11!44;UBERON:0000161!5.06e-11!35;UBERON:0001008!6.77e-11!45;UBERON:0006947!7.41e-11!3;UBERON:0004054!7.41e-11!3;UBERON:0003064!5.51e-10!37;UBERON:0003101!1.52e-08!22;UBERON:0000079!1.52e-08!22;UBERON:0005904!3.09e-08!4;UBERON:0000341!4.67e-08!2;UBERON:0004119!5.43e-08!169;UBERON:0000925!5.43e-08!169;UBERON:0006595!5.43e-08!169;UBERON:0003102!6.26e-08!95;UBERON:0002419!1.12e-07!2;UBERON:0007771!1.12e-07!2;UBERON:0003297!1.12e-07!2;UBERON:0001821!1.12e-07!2;UBERON:0003487!1.12e-07!2;UBERON:0001820!1.12e-07!2;UBERON:0005089!1.12e-07!2;UBERON:0005088!1.12e-07!2;UBERON:0003937!5.80e-07!12;UBERON:0005399!5.80e-07!12;UBERON:0004876!6.65e-07!20;UBERON:0000166!7.80e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;4.13e-17;2!UBERON:0006947;1.01e-11;3!UBERON:0004054;1.01e-11;3!UBERON:0001949;1.77e-11;3!UBERON:0003937;5.02e-11;12!UBERON:0005399;5.02e-11;12!UBERON:0005795;8.31e-10;1!UBERON:0000998;1.32e-09;1!UBERON:0006868;1.32e-09;1!UBERON:0007029;3.12e-09;1!UBERON:0001154;3.12e-09;1!UBERON:0001000;3.12e-09;1!UBERON:0001153;3.12e-09;1!UBERON:0009854;3.12e-09;1!UBERON:0005352;3.12e-09;1!UBERON:0003101;5.08e-09;22!UBERON:0000079;5.08e-09;22!UBERON:0005904;5.18e-09;4!UBERON:0010371;8.39e-09;31!UBERON:0001003;1.05e-08;15!UBERON:0007376;1.05e-08;15!UBERON:0002367;3.85e-07;11!UBERON:0010147;3.85e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,5.51e-17,2;UBERON:0006947,9.83e-12,3;UBERON:0004054,9.83e-12,3;UBERON:0001949,1.59e-11,3;UBERON:0003937,5.51e-11,12;UBERON:0005399,5.51e-11,12;UBERON:0000161,4.41e-10,36;UBERON:0000998,1.56e-09,1;UBERON:0006868,1.56e-09,1;UBERON:0007029,1.69e-09,1;UBERON:0001154,2.16e-09,1;UBERON:0001153,2.16e-09,1;UBERON:0001045,2.16e-09,1;UBERON:0001000,2.55e-09,1;UBERON:0005352,2.55e-09,1;UBERON:0005904,5.09e-09,4;UBERON:0003101,5.18e-09,22;UBERON:0000079,5.18e-09,22;UBERON:0001003,1.08e-08,15;UBERON:0007376,1.08e-08,15;UBERON:0007383,1.08e-08,15;UBERON:0003102,7.06e-08,99;UBERON:0002530,1.24e-07,59;UBERON:0002367,3.98e-07,11;UBERON:0010147,3.98e-07,11;UBERON:0009846,3.98e-07,11;UBERON:0003353,3.98e-07,11;UBERON:0004902,3.98e-07,11;UBERON:0003820,3.98e-07,11;UBERON:0009847,3.98e-07,11;UBERON:0001046,5.88e-07,19 | |||
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|short_description=p3@CWH43 | |||
}} |
Revision as of 11:04, 13 September 2013
Short description: | p3@CWH43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CWH43_5end |
Coexpression cluster: | C4421_glassy_squamous_colon_nasal_salivary_Prostate_seminal |
Association with transcript: | 0bp_to_ENST00000226432, NM_025087, uc003gyv.2_5end |
EntrezGene: | CWH43 |
HGNC: | 26133 |
UniProt: | Q9H720 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 6.04e-12 | 3 |
gingival epithelial cell | 1.59e-11 | 3 |
epidermal cell | 1.84e-08 | 9 |
keratinocyte | 2.59e-07 | 5 |
acinar cell | 2.59e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
throat | 5.51e-17 | 2 |
male genital duct | 9.83e-12 | 3 |
internal male genitalia | 9.83e-12 | 3 |
gingival epithelium | 1.59e-11 | 3 |
sex gland | 5.51e-11 | 12 |
male reproductive gland | 5.51e-11 | 12 |
orifice | 4.41e-10 | 36 |
seminal vesicle | 1.56e-09 | 1 |
seminal fluid secreting gland | 1.56e-09 | 1 |
surface | 1.69e-09 | 1 |
vermiform appendix | 2.16e-09 | 1 |
caecum | 2.16e-09 | 1 |
midgut | 2.16e-09 | 1 |
vas deferens | 2.55e-09 | 1 |
spermatic cord | 2.55e-09 | 1 |
duct of male reproductive system | 5.09e-09 | 4 |
male organism | 5.18e-09 | 22 |
male reproductive system | 5.18e-09 | 22 |
skin epidermis | 1.08e-08 | 15 |
outer epithelium | 1.08e-08 | 15 |
enveloping layer of ectoderm | 1.08e-08 | 15 |
surface structure | 7.06e-08 | 99 |
gland | 1.24e-07 | 59 |
prostate gland | 3.98e-07 | 11 |
male accessory sex gland | 3.98e-07 | 11 |
embryonic cloacal epithelium | 3.98e-07 | 11 |
epithelium of hindgut | 3.98e-07 | 11 |
urogenital sinus epithelium | 3.98e-07 | 11 |
prostate bud | 3.98e-07 | 11 |
prostate field | 3.98e-07 | 11 |
hindgut | 5.88e-07 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.