FFCP PHASE1:Hg19::chr4:77908757..77908793,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55752|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25589|TSSclassifier=W|UniProt=|association_with_transcript=-147bp_to_ENST00000512333_5end|description=CAGE_peak_6_at_SEPT11_5end|id=chr4:77908757..77908793,+|ontology_enrichment_celltype=CL:0000055!3.79e-46!180;CL:0000057!6.46e-29!75;CL:0000048!8.22e-17!430;CL:0000723!5.98e-16!436;CL:0000680!6.29e-16!57;CL:0000056!6.29e-16!57;CL:0000355!6.29e-16!57;CL:0000034!7.57e-15!444;CL:0002620!1.61e-14!23;CL:0000187!5.03e-14!54;CL:0002371!1.02e-12!591;CL:0000393!3.83e-12!60;CL:0000211!3.83e-12!60;CL:0000192!3.94e-12!42;CL:0000514!3.94e-12!42;CL:0000183!7.87e-12!59;CL:0000144!1.67e-11!625;CL:0000548!4.98e-08!679;CL:0000004!4.98e-08!679;CL:0000255!4.98e-08!679;CL:0000012!9.29e-08!682;CL:0000219!2.39e-07!390;CL:0002320!3.19e-07!365;CL:0000359!4.69e-07!32;CL:0000134!5.01e-07!358|ontology_enrichment_celltype_v019=CL:0002620;1.83e-13;23!CL:0000057;3.99e-08;73!CL:0000135;3.01e-07;3!CL:0002580;3.01e-07;3!CL:0000388;3.01e-07;3!CL:0000197;6.09e-07;6!CL:0000098;6.09e-07;6!CL:0002167;6.09e-07;6!CL:0000499;9.16e-07;28|ontology_enrichment_celltype_v019_2=CL:0000057,4.58e-20,76;CL:0002620,2.63e-13,23;CL:0000048,1.28e-12,427;CL:0000723,3.51e-12,433;CL:0000034,1.30e-11,441;CL:0000134,5.95e-09,354;CL:0000219,7.83e-09,386;CL:0002320,1.73e-08,361;CL:0002580,1.78e-07,3;CL:0000135,1.90e-07,3;CL:0000388,1.90e-07,3;CL:0000197,5.81e-07,6;CL:0000098,5.81e-07,6;CL:0002167,5.81e-07,6;CL:0002552,8.52e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;9.62e-08;5!DOID:450;9.62e-08;5!DOID:66;9.62e-08;5!DOID:423;9.62e-08;5!DOID:0080000;9.62e-08;5!DOID:11722;9.62e-08;5|ontology_enrichment_disease_v019_2=DOID:17,8.13e-08,5;DOID:450,8.13e-08,5;DOID:66,8.13e-08,5;DOID:423,8.13e-08,5;DOID:0080000,8.13e-08,5;DOID:11722,8.13e-08,5|ontology_enrichment_uberon=UBERON:0000914!3.81e-19!83;UBERON:0002329!3.81e-19!83;UBERON:0003077!3.81e-19!83;UBERON:0003059!3.81e-19!83;UBERON:0007282!3.81e-19!83;UBERON:0009618!3.81e-19!83;UBERON:0007285!3.81e-19!83;UBERON:0004290!5.12e-16!70;UBERON:0001134!5.16e-14!61;UBERON:0002036!5.16e-14!61;UBERON:0003082!5.16e-14!61;UBERON:0000486!2.61e-13!82;UBERON:0002385!3.69e-13!63;UBERON:0001015!3.69e-13!63;UBERON:0000383!3.69e-13!63;UBERON:0003102!7.85e-13!95;UBERON:0002199!3.09e-11!45;UBERON:0002416!3.09e-11!45;UBERON:0002097!4.90e-10!40;UBERON:0005256!6.30e-09!143;UBERON:0000475!1.28e-08!365;UBERON:0002384!4.61e-08!375;UBERON:0002100!4.01e-07!216|ontology_enrichment_uberon_v019=UBERON:0002097;5.38e-08;41!UBERON:0002384;2.82e-07;198!UBERON:0007846;3.01e-07;3!UBERON:0000043;3.01e-07;3!UBERON:0007845;3.01e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.64e-10,41;UBERON:0002384,1.62e-09,371;UBERON:0003102,1.24e-08,99;UBERON:0002199,1.58e-08,46;UBERON:0002416,1.58e-08,46;UBERON:0007846,1.90e-07,3;UBERON:0000043,1.90e-07,3;UBERON:0007845,1.90e-07,3|phase1_expression=3.99692434395225,3.42560838225573,1.83240725324762,0,1.34088328328186,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0.791300934685361,0.247532705920093,0,1.34465029290355,1.20538905604795,2.19093027116212,1.46379839637152,0.738726348460727,0,0,0.572471974262113,0.410623275218653,1.63205431473244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,2.50668955317945,1.15877215168659,1.5905718941022,0,0.189069634328136,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,1.2663051166458,9.1362334761121,0.860509862246441,0.709336764396714,0.560677600142307,1.06748995729705,1.2333377420858,0.311211035399766,0.269421344139376,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,0.117434498643765,0.485618833104395,0.140450806702248,1.63323337003915,0.491337269247072,1.23990937410919,2.37600571456411,1.7308685049499,0,0,0.841680569770331,0.250237039743928,2.21651292387346,3.07284334616587,1.22595118319608,0.45071417671979,0.340296549480063,1.61450672119976,7.47450860864986,7.84148034290379,0.900273288253207,3.19462840639161,2.57640540045629,4.09457083929498,1.0126579934476,1.26668106709558,2.01947019395292,11.690337127572,0.161646056818812,2.13005755509969,3.62707553619505,1.18692414617341,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,4.64367928031979,7.21879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0.1466765716419,0.904902010304444,0,0.845302752556,1.59562869950922,0,0,0,0,1.14382394926518,0,0.823240336780769,0.65147236858747,0.710783897485092,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0,0,2.15662369942424,1.148619358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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55752 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25589 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-147bp_to_ENST00000512333_5end | |||
|description=CAGE_peak_6_at_SEPT11_5end | |||
|id=chr4:77908757..77908793,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.79e-46!180;CL:0000057!6.46e-29!75;CL:0000048!8.22e-17!430;CL:0000723!5.98e-16!436;CL:0000680!6.29e-16!57;CL:0000056!6.29e-16!57;CL:0000355!6.29e-16!57;CL:0000034!7.57e-15!444;CL:0002620!1.61e-14!23;CL:0000187!5.03e-14!54;CL:0002371!1.02e-12!591;CL:0000393!3.83e-12!60;CL:0000211!3.83e-12!60;CL:0000192!3.94e-12!42;CL:0000514!3.94e-12!42;CL:0000183!7.87e-12!59;CL:0000144!1.67e-11!625;CL:0000548!4.98e-08!679;CL:0000004!4.98e-08!679;CL:0000255!4.98e-08!679;CL:0000012!9.29e-08!682;CL:0000219!2.39e-07!390;CL:0002320!3.19e-07!365;CL:0000359!4.69e-07!32;CL:0000134!5.01e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.83e-13;23!CL:0000057;3.99e-08;73!CL:0000135;3.01e-07;3!CL:0002580;3.01e-07;3!CL:0000388;3.01e-07;3!CL:0000197;6.09e-07;6!CL:0000098;6.09e-07;6!CL:0002167;6.09e-07;6!CL:0000499;9.16e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.58e-20,76;CL:0002620,2.63e-13,23;CL:0000048,1.28e-12,427;CL:0000723,3.51e-12,433;CL:0000034,1.30e-11,441;CL:0000134,5.95e-09,354;CL:0000219,7.83e-09,386;CL:0002320,1.73e-08,361;CL:0002580,1.78e-07,3;CL:0000135,1.90e-07,3;CL:0000388,1.90e-07,3;CL:0000197,5.81e-07,6;CL:0000098,5.81e-07,6;CL:0002167,5.81e-07,6;CL:0002552,8.52e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;9.62e-08;5!DOID:450;9.62e-08;5!DOID:66;9.62e-08;5!DOID:423;9.62e-08;5!DOID:0080000;9.62e-08;5!DOID:11722;9.62e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.13e-08,5;DOID:450,8.13e-08,5;DOID:66,8.13e-08,5;DOID:423,8.13e-08,5;DOID:0080000,8.13e-08,5;DOID:11722,8.13e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.81e-19!83;UBERON:0002329!3.81e-19!83;UBERON:0003077!3.81e-19!83;UBERON:0003059!3.81e-19!83;UBERON:0007282!3.81e-19!83;UBERON:0009618!3.81e-19!83;UBERON:0007285!3.81e-19!83;UBERON:0004290!5.12e-16!70;UBERON:0001134!5.16e-14!61;UBERON:0002036!5.16e-14!61;UBERON:0003082!5.16e-14!61;UBERON:0000486!2.61e-13!82;UBERON:0002385!3.69e-13!63;UBERON:0001015!3.69e-13!63;UBERON:0000383!3.69e-13!63;UBERON:0003102!7.85e-13!95;UBERON:0002199!3.09e-11!45;UBERON:0002416!3.09e-11!45;UBERON:0002097!4.90e-10!40;UBERON:0005256!6.30e-09!143;UBERON:0000475!1.28e-08!365;UBERON:0002384!4.61e-08!375;UBERON:0002100!4.01e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.38e-08;41!UBERON:0002384;2.82e-07;198!UBERON:0007846;3.01e-07;3!UBERON:0000043;3.01e-07;3!UBERON:0007845;3.01e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.64e-10,41;UBERON:0002384,1.62e-09,371;UBERON:0003102,1.24e-08,99;UBERON:0002199,1.58e-08,46;UBERON:0002416,1.58e-08,46;UBERON:0007846,1.90e-07,3;UBERON:0000043,1.90e-07,3;UBERON:0007845,1.90e-07,3 | |||
|phase1_expression=3.99692434395225,3.42560838225573,1.83240725324762,0,1.34088328328186,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0.791300934685361,0.247532705920093,0,1.34465029290355,1.20538905604795,2.19093027116212,1.46379839637152,0.738726348460727,0,0,0.572471974262113,0.410623275218653,1.63205431473244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,2.50668955317945,1.15877215168659,1.5905718941022,0,0.189069634328136,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,1.2663051166458,9.1362334761121,0.860509862246441,0.709336764396714,0.560677600142307,1.06748995729705,1.2333377420858,0.311211035399766,0.269421344139376,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,0.117434498643765,0.485618833104395,0.140450806702248,1.63323337003915,0.491337269247072,1.23990937410919,2.37600571456411,1.7308685049499,0,0,0.841680569770331,0.250237039743928,2.21651292387346,3.07284334616587,1.22595118319608,0.45071417671979,0.340296549480063,1.61450672119976,7.47450860864986,7.84148034290379,0.900273288253207,3.19462840639161,2.57640540045629,4.09457083929498,1.0126579934476,1.26668106709558,2.01947019395292,11.690337127572,0.161646056818812,2.13005755509969,3.62707553619505,1.18692414617341,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,4.64367928031979,7.21879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0.1466765716419,0.904902010304444,0,0.845302752556,1.59562869950922,0,0,0,0,1.14382394926518,0,0.823240336780769,0.65147236858747,0.710783897485092,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0,0,2.15662369942424,1.14861935834114,0,3.32997005335432,0.410952645100767,1.61154866915906,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,4.78332981520856,11.5978842718155,9.61984731707001,5.62278791965023,1.80567659836631,0,0,1.99267679560631,0.737476674166813,4.69171518127647,0,0,0,0,0,0,0,3.0239029332968,4.21783273291921,2.60885354589706,1.96462066103151,2.94720043288112,0.511707249066704,0.804269605718038,0,0.154209693802656,0.532685175939381,0.574890092096664,0,0.116210378459959,0,0,0,1.14814448164607,0.728364672026868,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,4.2121953816438,4.7855509953941,0.574265537996172,0,0,1.25671933779759,0,0.15350367472613,0.551346289938122,1.82614416276065,0.290033387828457,0.170453254832202,2.1367688555217,0,0,0,0,0.464845549297286,2.83331112147576,0,0,0,0.869932992075073,0.18532421910392,0.286249773483982,0.372158369359667,3.16379424718726,0.38126038784765,0.255897791311334,0,0.318203247925937,0,1.07923474549989,0.54907405947211,0.706874414074119,0.404364963146632,0,0,0.48763373908959,0.731140468893853,0,1.63799893689583,1.27264888758341,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0.655894752046633,0.202910376962704,0.30982349809975,0,0.860468113224309,1.08073945114433,0,0.354761064070598,1.05553817648832,2.30506425071931,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,6.22079175323615,0,0,0,0.197286811273867,0,6.66821940867821,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.230850775511391,0.227884111694002,0,0,0,0,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0.685209623233754,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,1.63085047288337,1.04602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,1.19271615249795,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04478362020812,2.80455971816669,0.554805861502613,0.378806010550178,2.0125432140206,1.77962244319307,2.51724075236616,0.302461847526478,0.466311601748341,0.591420599958536,0.477890301491107,3.14862178514523,0.465788870628778,1.24411862352257,0,3.1304703708704,0,0.380805212168795,0,0.545545977607678,0.107410557042488,0,1.59238355479446,2.00013882331577,2.40376993627955,2.35724642136143,11.3566408405786,0,0,0,0,0,0.489473409012935,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,2.22603045457393,0,0,2.82140754952547,3.3687002508852,0,0,0,0,0,0,0,0,0,0,0,0,11.0600807685478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| |||
|short_description=p6@SEPT11 | |||
}} |
Revision as of 11:49, 13 September 2013
Short description: | p6@SEPT11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SEPT11_5end |
Coexpression cluster: | NA |
Association with transcript: | -147bp_to_ENST00000512333_5end |
EntrezGene: | SEPT11 |
HGNC: | 25589 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.58e-20 | 76 |
skin fibroblast | 2.63e-13 | 23 |
multi fate stem cell | 1.28e-12 | 427 |
somatic stem cell | 3.51e-12 | 433 |
stem cell | 1.30e-11 | 441 |
mesenchymal cell | 5.95e-09 | 354 |
motile cell | 7.83e-09 | 386 |
connective tissue cell | 1.73e-08 | 361 |
preadipocyte of the breast | 1.78e-07 | 3 |
fibrocyte | 1.90e-07 | 3 |
tendon cell | 1.90e-07 | 3 |
receptor cell | 5.81e-07 | 6 |
sensory epithelial cell | 5.81e-07 | 6 |
olfactory epithelial cell | 5.81e-07 | 6 |
fibroblast of gingiva | 8.52e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.64e-10 | 41 |
connective tissue | 1.62e-09 | 371 |
surface structure | 1.24e-08 | 99 |
integument | 1.58e-08 | 46 |
integumental system | 1.58e-08 | 46 |
dense regular connective tissue | 1.90e-07 | 3 |
tendon | 1.90e-07 | 3 |
regular connective tissue | 1.90e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.13e-08 | 5 |
myotonic disease | 8.13e-08 | 5 |
muscle tissue disease | 8.13e-08 | 5 |
myopathy | 8.13e-08 | 5 |
muscular disease | 8.13e-08 | 5 |
myotonic dystrophy | 8.13e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.