FFCP PHASE1:Mm9::chr17:24781927..24781939,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=65962|HGNC=|MCL_coexpression_id=32|UniProt=Q9JHL1|association_with_transcript=-25bp_to_ENSMUST00000019684,NM_023449,uc008axj.2_5end|description=CAGE_peak_4_at_Slc9a3r2_5end|id=chr17:24781927..24781939,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.25e-10!66;UBERON:0002048!2.68e-09!14;UBERON:0000117!2.68e-09!14;UBERON:0000171!2.68e-09!14;UBERON:0000170!2.68e-09!14;UBERON:0005597!2.68e-09!14;UBERON:0000118!2.68e-09!14;UBERON:0005157!7.21e-09!27;UBERON:0005177!1.44e-08!85;UBERON:0005153!6.91e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.54e-23,14;UBERON:0000117,3.54e-23,14;UBERON:0000171,3.54e-23,14;UBERON:0000170,3.54e-23,14;UBERON:0005597,3.54e-23,14;UBERON:0000118,3.54e-23,14;UBERON:0005153,9.33e-19,17;UBERON:0005178,9.33e-19,17;UBERON:0005181,9.33e-19,17;UBERON:0002224,9.33e-19,17;UBERON:0000915,9.33e-19,17;UBERON:0008947,9.33e-19,17;UBERON:0003258,9.33e-19,17;UBERON:0005157,1.16e-15,20;UBERON:0009569,2.06e-14,66;UBERON:0005177,2.12e-11,79;UBERON:0002100,1.57e-09,90;UBERON:0003103,2.50e-08,43;UBERON:0000065,4.47e-08,41;UBERON:0001004,7.80e-08,42;UBERON:0002113,9.11e-08,14;UBERON:0003918,9.11e-08,14;UBERON:0011143,9.11e-08,14;UBERON:0005095,9.11e-08,14;UBERON:0007687,9.11e-08,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.614426133024974,0,0,0,0,0.56276261003168,0.45839474333043,0.294628585473668,0,0,0.151452386666368,0.377857800533928,1.73918693221007,0.860423876981386,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.890652834388949,0.173485326766136,0.304465478312141,0.922461989024234,0.452167921657868,0.823120949949934,1.13099932196708,0.741584903203122,1.3013942122792,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0.457500602818626,0.125654352112864,0,0,0.41557608911912,0.162241263067758,0.305518091550949,0.124406970610093,0,0.210441855886474,0,0,0.540186389416048,0.150704817835715,0.272145996605311,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.710234206755631,0.393528463494808,0.154267112887378,0.232533944750408,0.804820204198858,0.817357396570186,0.822799249567402,1.14917224855367,1.4592385718254,1.60819986167866,1.53685080703735,1.61047702512446,0.210289948564127,0,0,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0,0.474529061544512,0.988193728344065,0,0,0.19496408711912,0,0,0,0.569003702859245,0.342745537829186,2.25415471346161,0.203651327845314,0.581857461502877,1.19230893813542,2.15004226222475,2.50937251565324,1.41298855057237,1.48076596706161,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0.624075346229121,1.26289438973556,0.179397413521912,0,7.57488079683079,0.189491411770485,0,0.509235257325564,0.469380496577004,2.1775813467436,1.90434912708811,5.26860849216057,1.41871629695572,3.76489972402917,4.62418829106713,7.20998584749247,4.48980952851328,9.40218880779825,0,0,0.491764273019036,0,0.642202359951168,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.642642632843614,0.283880170416537,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0.822745103010605,0.304464949114599,0.23467170806371,0.21183207086382,0,0.32977250588296,0.161464426695906,0.361877549568935,0.238744688006273,0.164140899745061,0,0.370850604021019,0.170870880797853,0.412773735926445,0.185194527369712,0,0.410082683163076,0.228778173206523,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0,0,0,1.04702376793612,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,1.36038230169127,0,0,0,0,0.187682475451182,0.36630324853453,0,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0,0.187283014939765,0.384150914429216,0.0574354689556133,0,0.463537303779422,0,0,0,0.342869252385415,0.177475806159338,0.476872379894642,0,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0.644613162144895,0,0,0.463735671240843|short_description=p4@Slc9a3r2}} | ||
|EntrezGene=65962 | |||
|HGNC= | |||
|MCL_coexpression_id=32 | |||
|UniProt=Q9JHL1 | |||
|association_with_transcript=-25bp_to_ENSMUST00000019684,NM_023449,uc008axj.2_5end | |||
|description=CAGE_peak_4_at_Slc9a3r2_5end | |||
|id=chr17:24781927..24781939,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.25e-10!66;UBERON:0002048!2.68e-09!14;UBERON:0000117!2.68e-09!14;UBERON:0000171!2.68e-09!14;UBERON:0000170!2.68e-09!14;UBERON:0005597!2.68e-09!14;UBERON:0000118!2.68e-09!14;UBERON:0005157!7.21e-09!27;UBERON:0005177!1.44e-08!85;UBERON:0005153!6.91e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.54e-23,14;UBERON:0000117,3.54e-23,14;UBERON:0000171,3.54e-23,14;UBERON:0000170,3.54e-23,14;UBERON:0005597,3.54e-23,14;UBERON:0000118,3.54e-23,14;UBERON:0005153,9.33e-19,17;UBERON:0005178,9.33e-19,17;UBERON:0005181,9.33e-19,17;UBERON:0002224,9.33e-19,17;UBERON:0000915,9.33e-19,17;UBERON:0008947,9.33e-19,17;UBERON:0003258,9.33e-19,17;UBERON:0005157,1.16e-15,20;UBERON:0009569,2.06e-14,66;UBERON:0005177,2.12e-11,79;UBERON:0002100,1.57e-09,90;UBERON:0003103,2.50e-08,43;UBERON:0000065,4.47e-08,41;UBERON:0001004,7.80e-08,42;UBERON:0002113,9.11e-08,14;UBERON:0003918,9.11e-08,14;UBERON:0011143,9.11e-08,14;UBERON:0005095,9.11e-08,14;UBERON:0007687,9.11e-08,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.614426133024974,0,0,0,0,0.56276261003168,0.45839474333043,0.294628585473668,0,0,0.151452386666368,0.377857800533928,1.73918693221007,0.860423876981386,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.890652834388949,0.173485326766136,0.304465478312141,0.922461989024234,0.452167921657868,0.823120949949934,1.13099932196708,0.741584903203122,1.3013942122792,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0.457500602818626,0.125654352112864,0,0,0.41557608911912,0.162241263067758,0.305518091550949,0.124406970610093,0,0.210441855886474,0,0,0.540186389416048,0.150704817835715,0.272145996605311,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.710234206755631,0.393528463494808,0.154267112887378,0.232533944750408,0.804820204198858,0.817357396570186,0.822799249567402,1.14917224855367,1.4592385718254,1.60819986167866,1.53685080703735,1.61047702512446,0.210289948564127,0,0,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0,0.474529061544512,0.988193728344065,0,0,0.19496408711912,0,0,0,0.569003702859245,0.342745537829186,2.25415471346161,0.203651327845314,0.581857461502877,1.19230893813542,2.15004226222475,2.50937251565324,1.41298855057237,1.48076596706161,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0.624075346229121,1.26289438973556,0.179397413521912,0,7.57488079683079,0.189491411770485,0,0.509235257325564,0.469380496577004,2.1775813467436,1.90434912708811,5.26860849216057,1.41871629695572,3.76489972402917,4.62418829106713,7.20998584749247,4.48980952851328,9.40218880779825,0,0,0.491764273019036,0,0.642202359951168,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.642642632843614,0.283880170416537,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0.822745103010605,0.304464949114599,0.23467170806371,0.21183207086382,0,0.32977250588296,0.161464426695906,0.361877549568935,0.238744688006273,0.164140899745061,0,0.370850604021019,0.170870880797853,0.412773735926445,0.185194527369712,0,0.410082683163076,0.228778173206523,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0,0,0,1.04702376793612,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,1.36038230169127,0,0,0,0,0.187682475451182,0.36630324853453,0,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0,0.187283014939765,0.384150914429216,0.0574354689556133,0,0.463537303779422,0,0,0,0.342869252385415,0.177475806159338,0.476872379894642,0,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0.644613162144895,0,0,0.463735671240843 | |||
|short_description=p4@Slc9a3r2 | |||
}} |
Revision as of 13:42, 13 September 2013
Short description: | p4@Slc9a3r2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc9a3r2_5end |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | -25bp_to_ENSMUST00000019684, NM_023449, uc008axj.2_5end |
EntrezGene: | Slc9a3r2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 3.54e-23 | 14 |
respiratory tube | 3.54e-23 | 14 |
respiration organ | 3.54e-23 | 14 |
pair of lungs | 3.54e-23 | 14 |
lung primordium | 3.54e-23 | 14 |
lung bud | 3.54e-23 | 14 |
epithelial bud | 9.33e-19 | 17 |
thoracic cavity element | 9.33e-19 | 17 |
thoracic segment organ | 9.33e-19 | 17 |
thoracic cavity | 9.33e-19 | 17 |
thoracic segment of trunk | 9.33e-19 | 17 |
respiratory primordium | 9.33e-19 | 17 |
endoderm of foregut | 9.33e-19 | 17 |
epithelial fold | 1.16e-15 | 20 |
subdivision of trunk | 2.06e-14 | 66 |
trunk region element | 2.12e-11 | 79 |
trunk | 1.57e-09 | 90 |
compound organ | 2.50e-08 | 43 |
respiratory tract | 4.47e-08 | 41 |
respiratory system | 7.80e-08 | 42 |
kidney | 9.11e-08 | 14 |
kidney mesenchyme | 9.11e-08 | 14 |
upper urinary tract | 9.11e-08 | 14 |
kidney rudiment | 9.11e-08 | 14 |
kidney field | 9.11e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.