FFCP PHASE1:Mm9::chr17:66472880..66472922,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=320209|HGNC=|UniProt=Q6AXC6,E9Q6F8|association_with_transcript=20bp_to_ENSMUST00000038387,ENSMUST00000163605,NM_001003919,uc008dha.1,uc008dhb.1_5end|description=CAGE_peak_1_at_Ddx11_5end|id=chr17:66472880..66472922,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!9.99e-11!29;UBERON:0001048!1.09e-09!147;UBERON:0002370!3.90e-09!23;UBERON:0000974!3.90e-09!23;UBERON:0004807!3.90e-09!23;UBERON:0005058!3.90e-09!23;UBERON:0003351!3.90e-09!23;UBERON:0009113!3.90e-09!23;UBERON:0003295!3.90e-09!23;UBERON:0009722!3.90e-09!23;UBERON:0005562!3.90e-09!23;UBERON:0007690!3.90e-09!23;UBERON:0003408!3.65e-08!24;UBERON:0006562!4.27e-08!24;UBERON:0001557!4.27e-08!24;UBERON:0001042!4.27e-08!24;UBERON:0008814!4.27e-08!24;UBERON:0009145!4.27e-08!24;UBERON:0000072!1.07e-07!27;UBERON:0002390!6.15e-07!45;UBERON:0003061!6.15e-07!45;UBERON:0000926!7.14e-07!193;UBERON:0004120!7.14e-07!193;UBERON:0006603!7.14e-07!193;UBERON:0000065!7.22e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0004177,9.80e-11,29;UBERON:0005057,9.80e-11,29;UBERON:0002370,3.84e-09,23;UBERON:0000974,3.84e-09,23;UBERON:0004807,3.84e-09,23;UBERON:0005058,3.84e-09,23;UBERON:0003351,3.84e-09,23;UBERON:0009113,3.84e-09,23;UBERON:0003295,3.84e-09,23;UBERON:0009722,3.84e-09,23;UBERON:0005562,3.84e-09,23;UBERON:0007690,3.84e-09,23;UBERON:0001048,8.19e-09,134;UBERON:0000153,1.27e-08,43;UBERON:0003408,3.60e-08,24;UBERON:0006562,4.84e-08,24;UBERON:0001557,4.84e-08,24;UBERON:0001042,4.84e-08,24;UBERON:0008814,4.84e-08,24;UBERON:0009145,4.84e-08,24;UBERON:0000072,1.20e-07,27;UBERON:0002390,5.81e-07,45;UBERON:0003061,5.81e-07,45;UBERON:0000077,6.59e-07,35;UBERON:0000065,7.88e-07,41;UBERON:0007811,8.66e-07,36|phase1_expression=5.12476310735341,0,1.81999695755814,1.20985684522732,0,4.70061961353291,3.97141489012394,8.52213934714403,7.46180227403834,9.36258105287974,6.50628279256919,6.1424562426409,14.2096605842901,14.1621051918776,10.3264026162855,11.5410902412201,13.2916756844348,5.99378114180652,8.63820931716154,10.6097412949508,9.95006494767516,7.24823943766463,6.00759515019551,3.51983330145495,2.98232065387321,0.57423196411502,2.58457197695445,1.72376986148711,1.71021077510736,3.52842181663903,3.76941868114018,15.2407361630311,15.9916844771988,31.6963362030877,10.1098066912946,10.805251948302,13.0668388007916,1.25559489221072,2.3440060335714,3.14114246384279,4.70585190424811,2.73218193983378,3.88408282424923,2.39203954153597,2.02753862439029,2.0190142737785,0.782391344348039,1.74420125104357,0.439372365468944,1.1665793944457,1.81982348112971,2.87505128729943,5.36904339384756,7.97898356212479,6.72187598284928,2.57259436035947,2.86533439938757,0,2.02316460859598,1.5869729378161,2.53532561402472,2.37191172448392,4.4464739805557,0.899899717281399,1.97773272513395,1.4209602298922,0.299600110518405,1.53687322128622,4.25127410464758,4.18518408828241,3.99617426567626,3.71346279724945,2.87129103237098,3.91970557487853,4.60058260887535,0.919218786610021,1.10115880999389,0.510749352340751,0.921639199537461,2.2420668914133,1.64677758484337,1.56274011167028,1.3959149950069,0.56276261003168,0.61119299110724,2.06240009831567,4.41352210477219,2.23679334990361,0.984440513331393,2.79614772395106,3.18850937571846,1.72084775396277,0.679971333707751,1.07940638327563,1.29955283489534,3.13618820968135,2.80888840263504,3.74946709671727,3.63700406444016,2.12003744706204,2.53518155598025,1.28326477414318,12.7402619853323,7.11066703153331,6.061749148314,4.56047757855178,5.05524445014783,3.53970027129086,7.25026074212081,2.3750742250372,9.71517829890361,5.48037860961854,6.6878494204257,4.52167921657868,4.23319345688537,3.64433114856059,0.494389935468748,1.44599356919912,3.5384422077995,3.72063754879041,4.85851340612866,6.78825354389311,9.31958806090611,2.34224637609238,3.77004072264219,3.0654846625031,5.63131085177825,1.79970819298022,4.57452817463033,1.19832511523858,0.457500602818626,5.15182843662744,1.21677024134594,0.767146371990992,1.0389402227978,1.46017136760982,6.21220119486929,4.10543003013307,0.758168275301024,2.10441855886474,13.0120442962704,6.43725892413724,6.84236093260327,7.68594570962147,6.39543092022482,7.55870949680614,5.528401749024,2.32833033665114,8.62271971731369,12.1027891307404,7.2139960907219,6.1374805079721,10.5657954705727,8.70630416305416,6.58502836505419,10.7478504081986,5.61770549850588,3.08817488537658,4.83077948972507,7.45652781127807,8.44293815931946,10.2635375032778,9.2330446878232,5.90292695242211,7.0962871928194,6.27841650826101,5.633741429392,3.03589890154641,5.59503489705834,2.95501435342371,1.78351381000883,1.90059983652932,1.97595103761946,1.74468344388483,0.841159794256509,2.88132914661996,0.991256348951394,3.43785736662608,10.6644125267617,14.3986736553472,9.79392706047909,6.85723983719365,6.0042071838115,4.94586627892654,4.2707615539006,1.31759163779209,2.76468729680296,2.98434708061726,4.67913809085888,3.59527763461689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| ||
|EntrezGene=320209 | |||
|HGNC= | |||
|UniProt=Q6AXC6,E9Q6F8 | |||
|association_with_transcript=20bp_to_ENSMUST00000038387,ENSMUST00000163605,NM_001003919,uc008dha.1,uc008dhb.1_5end | |||
|description=CAGE_peak_1_at_Ddx11_5end | |||
|id=chr17:66472880..66472922,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.99e-11!29;UBERON:0001048!1.09e-09!147;UBERON:0002370!3.90e-09!23;UBERON:0000974!3.90e-09!23;UBERON:0004807!3.90e-09!23;UBERON:0005058!3.90e-09!23;UBERON:0003351!3.90e-09!23;UBERON:0009113!3.90e-09!23;UBERON:0003295!3.90e-09!23;UBERON:0009722!3.90e-09!23;UBERON:0005562!3.90e-09!23;UBERON:0007690!3.90e-09!23;UBERON:0003408!3.65e-08!24;UBERON:0006562!4.27e-08!24;UBERON:0001557!4.27e-08!24;UBERON:0001042!4.27e-08!24;UBERON:0008814!4.27e-08!24;UBERON:0009145!4.27e-08!24;UBERON:0000072!1.07e-07!27;UBERON:0002390!6.15e-07!45;UBERON:0003061!6.15e-07!45;UBERON:0000926!7.14e-07!193;UBERON:0004120!7.14e-07!193;UBERON:0006603!7.14e-07!193;UBERON:0000065!7.22e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,9.80e-11,29;UBERON:0005057,9.80e-11,29;UBERON:0002370,3.84e-09,23;UBERON:0000974,3.84e-09,23;UBERON:0004807,3.84e-09,23;UBERON:0005058,3.84e-09,23;UBERON:0003351,3.84e-09,23;UBERON:0009113,3.84e-09,23;UBERON:0003295,3.84e-09,23;UBERON:0009722,3.84e-09,23;UBERON:0005562,3.84e-09,23;UBERON:0007690,3.84e-09,23;UBERON:0001048,8.19e-09,134;UBERON:0000153,1.27e-08,43;UBERON:0003408,3.60e-08,24;UBERON:0006562,4.84e-08,24;UBERON:0001557,4.84e-08,24;UBERON:0001042,4.84e-08,24;UBERON:0008814,4.84e-08,24;UBERON:0009145,4.84e-08,24;UBERON:0000072,1.20e-07,27;UBERON:0002390,5.81e-07,45;UBERON:0003061,5.81e-07,45;UBERON:0000077,6.59e-07,35;UBERON:0000065,7.88e-07,41;UBERON:0007811,8.66e-07,36 | |||
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| |||
|short_description=p1@Ddx11 | |||
}} |
Revision as of 15:08, 13 September 2013
Short description: | p1@Ddx11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ddx11_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENSMUST00000038387, ENSMUST00000163605, NM_001003919, uc008dha.1, uc008dhb.1_5end |
EntrezGene: | Ddx11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 9.80e-11 | 29 |
immune organ | 9.80e-11 | 29 |
thymus | 3.84e-09 | 23 |
neck | 3.84e-09 | 23 |
respiratory system epithelium | 3.84e-09 | 23 |
hemolymphoid system gland | 3.84e-09 | 23 |
pharyngeal epithelium | 3.84e-09 | 23 |
thymic region | 3.84e-09 | 23 |
pharyngeal gland | 3.84e-09 | 23 |
entire pharyngeal arch endoderm | 3.84e-09 | 23 |
thymus primordium | 3.84e-09 | 23 |
early pharyngeal endoderm | 3.84e-09 | 23 |
primordium | 8.19e-09 | 134 |
anterior region of body | 1.27e-08 | 43 |
gland of gut | 3.60e-08 | 24 |
pharynx | 4.84e-08 | 24 |
upper respiratory tract | 4.84e-08 | 24 |
chordate pharynx | 4.84e-08 | 24 |
pharyngeal arch system | 4.84e-08 | 24 |
pharyngeal region of foregut | 4.84e-08 | 24 |
segment of respiratory tract | 1.20e-07 | 27 |
hematopoietic system | 5.81e-07 | 45 |
blood island | 5.81e-07 | 45 |
mixed endoderm/mesoderm-derived structure | 6.59e-07 | 35 |
respiratory tract | 7.88e-07 | 41 |
craniocervical region | 8.66e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.