FFCP PHASE1:Hg19::chr5:95744003..95744034,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:95744003..95744034,-|id=chr5:95744003..95744034,-|ontology_enrichment_celltype=CL:0000071!3.42e-13!18;CL:0002546!3.42e-13!18;CL:0002139!3.68e-13!24;CL:1000413!6.70e-10!9;CL:0000076!7.29e-09!62;CL:0000222!2.45e-08!119;CL:0000213!3.54e-07!57;CL:0000215!3.54e-07!57;CL:0002544!3.74e-07!6;CL:0002078!4.79e-07!44;CL:0000115!4.82e-07!35|ontology_enrichment_celltype_v019=CL:0002139;1.41e-19;24!CL:0000071;1.50e-16;18!CL:0000115;1.31e-12;36!CL:0002543;2.47e-11;6!CL:1000413;6.82e-11;9!CL:0002623;4.80e-10;3!CL:0002615;6.92e-09;3!CL:0002544;7.16e-08;6!CL:0000136;1.91e-07;13!CL:0002078;3.11e-07;45!CL:0000213;3.51e-07;58!CL:0000215;3.51e-07;58!CL:0002617;7.40e-07;2|ontology_enrichment_celltype_v019_2=CL:0002139,8.52e-20,24;CL:0000071,9.37e-17,18;CL:0002546,9.37e-17,18;CL:0000115,5.62e-14,36;CL:0002543,2.24e-11,6;CL:0000213,4.25e-11,58;CL:0000215,4.25e-11,58;CL:1000413,4.35e-11,9;CL:0002078,1.82e-10,45;CL:0002623,5.28e-10,3;CL:0002615,1.74e-08,3;CL:0002544,5.30e-08,6;CL:0000066,1.39e-07,253;CL:0000222,3.48e-07,121;CL:0002617,8.96e-07,2;CL:0002545,9.50e-07,2|ontology_enrichment_development_v019=CL:0002546;1.50e-16;18!UBERON:0008947;3.17e-08;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!3.42e-13!18;UBERON:0004638!3.42e-13!18;UBERON:0004852!3.42e-13!18;UBERON:0001737!4.34e-11!9;UBERON:0006914!2.16e-10!25;UBERON:0003915!6.70e-10!9;UBERON:0004700!6.70e-10!9;UBERON:0001917!6.70e-10!9;UBERON:0000487!8.69e-10!22;UBERON:0001557!2.73e-07!19;UBERON:0000477!8.72e-07!286|ontology_enrichment_uberon_v019=UBERON:0001737;2.27e-25;9!UBERON:0001557;2.27e-25;9!UBERON:0004638;1.50e-16;18!UBERON:0001986;1.50e-16;18!UBERON:0004852;1.50e-16;18!UBERON:0000487;4.21e-13;22!UBERON:0006914;3.03e-11;25!UBERON:0003915;6.82e-11;9!UBERON:0004700;6.82e-11;9!UBERON:0001917;6.82e-11;9!UBERON:0011135;2.40e-09;5!UBERON:0002216;2.40e-09;5!UBERON:0011134;2.40e-09;5!UBERON:0002209;2.40e-09;5!UBERON:0002213;2.40e-09;5!UBERON:0007844;2.40e-09;5!UBERON:0011138;2.40e-09;5!UBERON:0001130;2.40e-09;5!UBERON:0001066;2.40e-09;5!UBERON:0001468;2.40e-09;5!UBERON:0001638;1.91e-07;9!UBERON:0003920;1.91e-07;9!UBERON:0004582;1.91e-07;9!UBERON:0000490;2.75e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.68e-26,9;UBERON:0004638,9.37e-17,18;UBERON:0001986,9.37e-17,18;UBERON:0004852,9.37e-17,18;UBERON:0000487,2.89e-13,22;UBERON:0006914,2.19e-11,25;UBERON:0001557,3.34e-11,19;UBERON:0003915,4.35e-11,9;UBERON:0004700,4.35e-11,9;UBERON:0001917,4.35e-11,9;UBERON:0011135,3.67e-09,5;UBERON:0002216,3.67e-09,5;UBERON:0011134,3.67e-09,5;UBERON:0002209,3.67e-09,5;UBERON:0002213,3.67e-09,5;UBERON:0005856,3.67e-09,5;UBERON:0005866,3.67e-09,5;UBERON:0005863,3.67e-09,5;UBERON:0007844,3.67e-09,5;UBERON:0011138,3.67e-09,5;UBERON:0001130,3.67e-09,5;UBERON:0001066,3.67e-09,5;UBERON:0001468,3.67e-09,5;UBERON:0001638,1.79e-07,9;UBERON:0003920,1.79e-07,9;UBERON:0004582,1.79e-07,9;UBERON:0008947,4.37e-07,38;UBERON:0003258,4.37e-07,38;UBERON:0000055,8.77e-07,68;UBERON:0005800,9.50e-07,2;UBERON:0001515,9.50e-07,2|phase1_expression=1.2717486548939,4.49611100171065,1.12763523276777,1.0007329835313,2.23480547213644,0,5.06599756336621,0.631719873426831,0.261185628199839,0,0,0,0,2.59909341216098,1.32558950291166,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0.361439152384566,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0.324547393654683,0.174129737299267,0,0,0,0,0.596287222100115,0.860234595106124,2.77712401286075,2.26123176769604,2.93649605346934,1.37559020970034,0.835979866147242,1.55050055501597,3.20189636418039,1.33888245105868,0.402829317109147,0,0,2.57364156242108,1.62028389576352,1.25019619597712,0.22452937262617,1.12611480483322,3.06633274931766,1.89853131913626,1.83201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,1.34710672069688,0.326923806226917,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,1.03325781175765,2.37600571456411,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,2.72105640091641,3.54027849164014,2.6511213287183,3.639701100169,2.39667388501647,3.55905928666645,2.29213223872279,1.96221465125346,2.30848294167834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:95744003..95744034,- | |||
|id=chr5:95744003..95744034,- | |||
|ontology_enrichment_celltype=CL:0000071!3.42e-13!18;CL:0002546!3.42e-13!18;CL:0002139!3.68e-13!24;CL:1000413!6.70e-10!9;CL:0000076!7.29e-09!62;CL:0000222!2.45e-08!119;CL:0000213!3.54e-07!57;CL:0000215!3.54e-07!57;CL:0002544!3.74e-07!6;CL:0002078!4.79e-07!44;CL:0000115!4.82e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.41e-19;24!CL:0000071;1.50e-16;18!CL:0000115;1.31e-12;36!CL:0002543;2.47e-11;6!CL:1000413;6.82e-11;9!CL:0002623;4.80e-10;3!CL:0002615;6.92e-09;3!CL:0002544;7.16e-08;6!CL:0000136;1.91e-07;13!CL:0002078;3.11e-07;45!CL:0000213;3.51e-07;58!CL:0000215;3.51e-07;58!CL:0002617;7.40e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.52e-20,24;CL:0000071,9.37e-17,18;CL:0002546,9.37e-17,18;CL:0000115,5.62e-14,36;CL:0002543,2.24e-11,6;CL:0000213,4.25e-11,58;CL:0000215,4.25e-11,58;CL:1000413,4.35e-11,9;CL:0002078,1.82e-10,45;CL:0002623,5.28e-10,3;CL:0002615,1.74e-08,3;CL:0002544,5.30e-08,6;CL:0000066,1.39e-07,253;CL:0000222,3.48e-07,121;CL:0002617,8.96e-07,2;CL:0002545,9.50e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.50e-16;18!UBERON:0008947;3.17e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.42e-13!18;UBERON:0004638!3.42e-13!18;UBERON:0004852!3.42e-13!18;UBERON:0001737!4.34e-11!9;UBERON:0006914!2.16e-10!25;UBERON:0003915!6.70e-10!9;UBERON:0004700!6.70e-10!9;UBERON:0001917!6.70e-10!9;UBERON:0000487!8.69e-10!22;UBERON:0001557!2.73e-07!19;UBERON:0000477!8.72e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.27e-25;9!UBERON:0001557;2.27e-25;9!UBERON:0004638;1.50e-16;18!UBERON:0001986;1.50e-16;18!UBERON:0004852;1.50e-16;18!UBERON:0000487;4.21e-13;22!UBERON:0006914;3.03e-11;25!UBERON:0003915;6.82e-11;9!UBERON:0004700;6.82e-11;9!UBERON:0001917;6.82e-11;9!UBERON:0011135;2.40e-09;5!UBERON:0002216;2.40e-09;5!UBERON:0011134;2.40e-09;5!UBERON:0002209;2.40e-09;5!UBERON:0002213;2.40e-09;5!UBERON:0007844;2.40e-09;5!UBERON:0011138;2.40e-09;5!UBERON:0001130;2.40e-09;5!UBERON:0001066;2.40e-09;5!UBERON:0001468;2.40e-09;5!UBERON:0001638;1.91e-07;9!UBERON:0003920;1.91e-07;9!UBERON:0004582;1.91e-07;9!UBERON:0000490;2.75e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.68e-26,9;UBERON:0004638,9.37e-17,18;UBERON:0001986,9.37e-17,18;UBERON:0004852,9.37e-17,18;UBERON:0000487,2.89e-13,22;UBERON:0006914,2.19e-11,25;UBERON:0001557,3.34e-11,19;UBERON:0003915,4.35e-11,9;UBERON:0004700,4.35e-11,9;UBERON:0001917,4.35e-11,9;UBERON:0011135,3.67e-09,5;UBERON:0002216,3.67e-09,5;UBERON:0011134,3.67e-09,5;UBERON:0002209,3.67e-09,5;UBERON:0002213,3.67e-09,5;UBERON:0005856,3.67e-09,5;UBERON:0005866,3.67e-09,5;UBERON:0005863,3.67e-09,5;UBERON:0007844,3.67e-09,5;UBERON:0011138,3.67e-09,5;UBERON:0001130,3.67e-09,5;UBERON:0001066,3.67e-09,5;UBERON:0001468,3.67e-09,5;UBERON:0001638,1.79e-07,9;UBERON:0003920,1.79e-07,9;UBERON:0004582,1.79e-07,9;UBERON:0008947,4.37e-07,38;UBERON:0003258,4.37e-07,38;UBERON:0000055,8.77e-07,68;UBERON:0005800,9.50e-07,2;UBERON:0001515,9.50e-07,2 | |||
|phase1_expression=1.2717486548939,4.49611100171065,1.12763523276777,1.0007329835313,2.23480547213644,0,5.06599756336621,0.631719873426831,0.261185628199839,0,0,0,0,2.59909341216098,1.32558950291166,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0.361439152384566,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0.324547393654683,0.174129737299267,0,0,0,0,0.596287222100115,0.860234595106124,2.77712401286075,2.26123176769604,2.93649605346934,1.37559020970034,0.835979866147242,1.55050055501597,3.20189636418039,1.33888245105868,0.402829317109147,0,0,2.57364156242108,1.62028389576352,1.25019619597712,0.22452937262617,1.12611480483322,3.06633274931766,1.89853131913626,1.83201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,1.34710672069688,0.326923806226917,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,1.03325781175765,2.37600571456411,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,2.72105640091641,3.54027849164014,2.6511213287183,3.639701100169,2.39667388501647,3.55905928666645,2.29213223872279,1.96221465125346,2.30848294167834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,1.74306691720059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.49076596687656,3.00102312635806,1.08506009479894,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,1.53084334748864,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.247528499761764,0.574265537996172,0,0,0.580024309752732,0.462145851343933,0.15350367472613,0,3.6522883255213,1.45016693914229,0.340906509664404,0.0890320356467374,0.330569830721956,0,0,0,0,0,0,2.46426864140871,0,0,1.48259375283136,0.286249773483982,0,0.316379424718726,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0.539617372749944,0.274537029736055,0.235624804691373,0.404364963146632,0,0,0,0.974853958525138,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0.35667105148125,0.709522128141196,0.422215270595328,0.658589785919804,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,4.56365690593914,0,0,0,0,0,2.14764233254525,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0.658156191461918,7.95250783688628,0.83654246567162,0,5.01345045726805,0,0,0,0,0,0,0,0,3.15802195610297,0,0,0,0,1.58936578980379,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,1.56531695145672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,1.45134496933628,4.31226970808495,2.46346371159628,0,0,0,0.548167698587004,0,0.189932387867636,0,0.320635281006135,0,0,0,0,0,0.288109595976299,0,3.29971648463514,0,0,0,1.44475294950759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,1.0063040627978,0,0,0,2.33073541132698,0.575745591958336,0,0,0,0,4.32110745600634,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,3.19170628885091,0.544017803369474,0,0,0.327872630709804,0,0,0.732157589411779,0.250381861413,0,0,0.0620964029413835,0,0.874862855734746,0,0.570930667089935,0,0,0,0,0.233713309847224,0,1.32582103692562,0.754703705257725,0,0,0.302461847526478,0.621748802331122,0.443565449968902,0.955780602982214,10.7952746919265,1.70789252563885,0,0,0,0.901545653983311,0.761610424337591,0.406870733204662,0.727394636810238,0.751873899297419,1.39210127963548,1.19428766609585,0.400027764663154,0.343395705182793,0,0,0.192619830407303,0.214441591374926,0,0,0,0.489473409012935,0,0,2.19284049578707,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0,0,0.982829546539238,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0.319267718114302,0.205116364240755,0,0.276629009856872,0.161475645631851,0,0.88332946650923,0.353909170043221,0,0.346576998451015,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0.781078098613847,0,0.126831620387814,0,0,0,0.351742488719241,0.127762427639595,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0.394636641377094,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27937780579341,5.97514669828825,3.45629830907046,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0.471353094203252,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0.203974470572744,0,0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| |||
|short_description=p@chr5:95744003..95744034,- | |||
}} |
Revision as of 17:00, 13 September 2013
Short description: | p@chr5:95744003..95744034, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:95744003..95744034, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.52e-20 | 24 |
blood vessel endothelial cell | 9.37e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.37e-17 | 18 |
endothelial cell | 5.62e-14 | 36 |
vein endothelial cell | 2.24e-11 | 6 |
lining cell | 4.25e-11 | 58 |
barrier cell | 4.25e-11 | 58 |
endothelial cell of artery | 4.35e-11 | 9 |
meso-epithelial cell | 1.82e-10 | 45 |
acinar cell of salivary gland | 5.28e-10 | 3 |
adipocyte of omentum tissue | 1.74e-08 | 3 |
aortic endothelial cell | 5.30e-08 | 6 |
epithelial cell | 1.39e-07 | 253 |
mesodermal cell | 3.48e-07 | 121 |
adipocyte of breast | 8.96e-07 | 2 |
thoracic aorta endothelial cell | 9.50e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 9.68e-26 | 9 |
blood vessel endothelium | 9.37e-17 | 18 |
endothelium | 9.37e-17 | 18 |
cardiovascular system endothelium | 9.37e-17 | 18 |
simple squamous epithelium | 2.89e-13 | 22 |
squamous epithelium | 2.19e-11 | 25 |
upper respiratory tract | 3.34e-11 | 19 |
endothelial tube | 4.35e-11 | 9 |
arterial system endothelium | 4.35e-11 | 9 |
endothelium of artery | 4.35e-11 | 9 |
intervertebral cartilage | 3.67e-09 | 5 |
symphysis | 3.67e-09 | 5 |
nonsynovial joint | 3.67e-09 | 5 |
fibrous joint | 3.67e-09 | 5 |
cartilaginous joint | 3.67e-09 | 5 |
developing mesenchymal condensation | 3.67e-09 | 5 |
pre-cartilage condensation | 3.67e-09 | 5 |
cartilaginous condensation | 3.67e-09 | 5 |
cartilage element | 3.67e-09 | 5 |
post-cranial axial skeletal system | 3.67e-09 | 5 |
vertebral column | 3.67e-09 | 5 |
intervertebral disk | 3.67e-09 | 5 |
intervertebral joint | 3.67e-09 | 5 |
vein | 1.79e-07 | 9 |
venous blood vessel | 1.79e-07 | 9 |
venous system | 1.79e-07 | 9 |
respiratory primordium | 4.37e-07 | 38 |
endoderm of foregut | 4.37e-07 | 38 |
vessel | 8.77e-07 | 68 |
segment of aorta | 9.50e-07 | 2 |
thoracic aorta | 9.50e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.