FFCP PHASE1:Mm9::chr19:21852866..21852882,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=83921|HGNC=|MCL_coexpression_id=3176|UniProt=Q5FWI3|association_with_transcript=34bp_to_ENSMUST00000025663,ENSMUST00000096194,NM_001033759,NM_031997,uc008gzd.1,uc008gze.1,uc008gzf.1,uc008gzg.1,uc008gzh.1_5end|description=CAGE_peak_2_at_Tmem2_5end|id=chr19:21852866..21852882,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!9.42e-09!17;UBERON:0005181!9.42e-09!17;UBERON:0002224!9.42e-09!17;UBERON:0000915!9.42e-09!17;UBERON:0008947!9.42e-09!17;UBERON:0003258!9.42e-09!17;UBERON:0002048!2.81e-07!14;UBERON:0000117!2.81e-07!14;UBERON:0000171!2.81e-07!14;UBERON:0000170!2.81e-07!14;UBERON:0005597!2.81e-07!14;UBERON:0000118!2.81e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005178,6.08e-09,17;UBERON:0005181,6.08e-09,17;UBERON:0002224,6.08e-09,17;UBERON:0000915,6.08e-09,17;UBERON:0008947,6.08e-09,17;UBERON:0003258,6.08e-09,17;UBERON:0002048,1.98e-07,14;UBERON:0000117,1.98e-07,14;UBERON:0000171,1.98e-07,14;UBERON:0000170,1.98e-07,14;UBERON:0005597,1.98e-07,14;UBERON:0000118,1.98e-07,14|phase1_expression=3.20297694209588,6.97950815278722,4.54999239389536,4.53696316960245,7.01254021924886,2.35030980676646,0.934450562382103,0,0.281577444303333,0.936258105287974,0,0,0,0.611942816932982,0.666219523631325,0.202475267389826,0,1.26184866143295,1.50825876966313,1.27316895539409,1.53077922271926,0.198581902401771,0.261199789138935,1.43993180514066,2.06468352960453,1.72269589234506,5.1691439539089,1.29282739611533,0.760093677825496,1.26015064879965,0.443461021310609,0,0,0,0.866554859253824,0.664938581433969,0.816677425049476,7.53356935326434,3.1253413780952,4.18818995179039,7.05877785637217,4.09827290975067,4.85510353031154,1.00717454380462,0.811015449756117,0.550640256485045,2.34717403304412,0.872100625521786,0.659058548203415,0.194429899074283,2.09979632438044,1.43752564364972,1.17447824240415,0,0.672187598284928,1.02903774414379,1.14613375975503,0.515672092277442,5.26022798234954,5.28990979272033,5.07065122804943,1.35537812827653,1.77858959222228,0.899899717281399,0,0.7104801149461,0,1.92109152660777,3.42175720617976,2.70011876663381,4.41682418837902,2.57085885963423,0.220868540951614,3.55223317723367,5.94241920313065,3.67687514644008,0,0.766124028511126,0.153606533256243,6.4624280987795,3.65950574409639,6.25096044668112,0.837548997004143,0,0,1.17851434189467,0.569486723196412,2.05039390407831,1.81742863999642,2.64500460373749,32.1749582458862,5.16254326188832,4.0798280022465,0,0,0.448026887097336,0.421333260395256,8.52151612890289,3.63700406444016,4.94675404314476,7.18301440861071,10.2661181931454,2.54805239706646,21.3320010945999,6.27824018932521,5.57391704045217,4.54972000513305,2.05530983494308,2.84831672011889,1.48442139064825,2.94925055502431,1.52232739156071,2.7673859670727,1.65794904607885,3.17489509266403,1.88499886994513,1.97755974187499,0.722996784599558,2.65383165584962,3.72063754879041,1.76673214768315,1.93950101254089,0,2.04946557908083,3.14170060220183,1.78819938646014,1.07833612055328,0.599902730993408,0.889491589511453,0.748953197024114,0,1.88481528169297,0.695297280769106,0.511430914660661,0.83115217823824,0.648965052271031,3.05518091550949,2.61254638281195,0.758168275301024,0.631325567659422,3.3831315170303,3.21862946206862,3.42118046630164,3.31550599238573,5.44291993210623,3.71529788826064,5.05989312622536,1.55222022443409,7.11374376678379,3.21480336285293,3.51902248327898,3.72632745126877,3.33656699070717,2.43776516565517,3.08673204611915,3.38358253591438,0.702213187313235,0.51469581422943,1.70498099637356,10.3562886267751,6.3322036194896,5.58192390529146,8.52281048106757,8.65762619688577,4.16521204795921,3.72054311600653,4.29237442239391,4.55384835231961,2.79751744852917,2.62667942526552,2.10778904819225,2.63159977365598,1.53685080703735,1.07365135008297,0.841159794256509,2.57261530948211,2.64335026387038,0.264450566663544,1.70630600428187,3.0190767341857,1.9330119198314,0.403367049246685,0.889512175379481,1.14135375667535,0.949058123089023,0.494096864172033,1.75934646160189,0.397912944082302,1.55971269695296,0.898819408654221,1.51296634912286,1.59313018603494,1.89667900953082,2.97046132785295,2.25415471346161,2.44381593414377,2.71533482034676,3.15611189506434,2.46622494784603,1.62371162777562,1.41298855057237,2.22114895059241,2.07516838961004,2.16898637430922,1.57247196090562,3.37293168577281,1.62288097110802,1.20588579876208,3.05551022137704,2.01387296215567,4.05338066937588,3.0201755450689,1.43768206527355,3.34926852901653,4.99260276983297,3.78868316920668,1.97337154874103,3.37710464954357,9.79191907883005,3.41084541186873,1.95557971730431,2.37643120085263,4.22442446919304,3.85264392116176,3.80869825417622,12.0982861671835,12.7684466726015,13.2878813789265,12.118562417969,9.5040722535128,9.84304396635605,14.0309586824066,0,1.63171705145613,0.491764273019036,0.827810238914197,0.481651769963376,1.17211686592203,0.983609672260053,0.757412781613119,1.57754109708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| ||
|EntrezGene=83921 | |||
|HGNC= | |||
|MCL_coexpression_id=3176 | |||
|UniProt=Q5FWI3 | |||
|association_with_transcript=34bp_to_ENSMUST00000025663,ENSMUST00000096194,NM_001033759,NM_031997,uc008gzd.1,uc008gze.1,uc008gzf.1,uc008gzg.1,uc008gzh.1_5end | |||
|description=CAGE_peak_2_at_Tmem2_5end | |||
|id=chr19:21852866..21852882,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!9.42e-09!17;UBERON:0005181!9.42e-09!17;UBERON:0002224!9.42e-09!17;UBERON:0000915!9.42e-09!17;UBERON:0008947!9.42e-09!17;UBERON:0003258!9.42e-09!17;UBERON:0002048!2.81e-07!14;UBERON:0000117!2.81e-07!14;UBERON:0000171!2.81e-07!14;UBERON:0000170!2.81e-07!14;UBERON:0005597!2.81e-07!14;UBERON:0000118!2.81e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,6.08e-09,17;UBERON:0005181,6.08e-09,17;UBERON:0002224,6.08e-09,17;UBERON:0000915,6.08e-09,17;UBERON:0008947,6.08e-09,17;UBERON:0003258,6.08e-09,17;UBERON:0002048,1.98e-07,14;UBERON:0000117,1.98e-07,14;UBERON:0000171,1.98e-07,14;UBERON:0000170,1.98e-07,14;UBERON:0005597,1.98e-07,14;UBERON:0000118,1.98e-07,14 | |||
|phase1_expression=3.20297694209588,6.97950815278722,4.54999239389536,4.53696316960245,7.01254021924886,2.35030980676646,0.934450562382103,0,0.281577444303333,0.936258105287974,0,0,0,0.611942816932982,0.666219523631325,0.202475267389826,0,1.26184866143295,1.50825876966313,1.27316895539409,1.53077922271926,0.198581902401771,0.261199789138935,1.43993180514066,2.06468352960453,1.72269589234506,5.1691439539089,1.29282739611533,0.760093677825496,1.26015064879965,0.443461021310609,0,0,0,0.866554859253824,0.664938581433969,0.816677425049476,7.53356935326434,3.1253413780952,4.18818995179039,7.05877785637217,4.09827290975067,4.85510353031154,1.00717454380462,0.811015449756117,0.550640256485045,2.34717403304412,0.872100625521786,0.659058548203415,0.194429899074283,2.09979632438044,1.43752564364972,1.17447824240415,0,0.672187598284928,1.02903774414379,1.14613375975503,0.515672092277442,5.26022798234954,5.28990979272033,5.07065122804943,1.35537812827653,1.77858959222228,0.899899717281399,0,0.7104801149461,0,1.92109152660777,3.42175720617976,2.70011876663381,4.41682418837902,2.57085885963423,0.220868540951614,3.55223317723367,5.94241920313065,3.67687514644008,0,0.766124028511126,0.153606533256243,6.4624280987795,3.65950574409639,6.25096044668112,0.837548997004143,0,0,1.17851434189467,0.569486723196412,2.05039390407831,1.81742863999642,2.64500460373749,32.1749582458862,5.16254326188832,4.0798280022465,0,0,0.448026887097336,0.421333260395256,8.52151612890289,3.63700406444016,4.94675404314476,7.18301440861071,10.2661181931454,2.54805239706646,21.3320010945999,6.27824018932521,5.57391704045217,4.54972000513305,2.05530983494308,2.84831672011889,1.48442139064825,2.94925055502431,1.52232739156071,2.7673859670727,1.65794904607885,3.17489509266403,1.88499886994513,1.97755974187499,0.722996784599558,2.65383165584962,3.72063754879041,1.76673214768315,1.93950101254089,0,2.04946557908083,3.14170060220183,1.78819938646014,1.07833612055328,0.599902730993408,0.889491589511453,0.748953197024114,0,1.88481528169297,0.695297280769106,0.511430914660661,0.83115217823824,0.648965052271031,3.05518091550949,2.61254638281195,0.758168275301024,0.631325567659422,3.3831315170303,3.21862946206862,3.42118046630164,3.31550599238573,5.44291993210623,3.71529788826064,5.05989312622536,1.55222022443409,7.11374376678379,3.21480336285293,3.51902248327898,3.72632745126877,3.33656699070717,2.43776516565517,3.08673204611915,3.38358253591438,0.702213187313235,0.51469581422943,1.70498099637356,10.3562886267751,6.3322036194896,5.58192390529146,8.52281048106757,8.65762619688577,4.16521204795921,3.72054311600653,4.29237442239391,4.55384835231961,2.79751744852917,2.62667942526552,2.10778904819225,2.63159977365598,1.53685080703735,1.07365135008297,0.841159794256509,2.57261530948211,2.64335026387038,0.264450566663544,1.70630600428187,3.0190767341857,1.9330119198314,0.403367049246685,0.889512175379481,1.14135375667535,0.949058123089023,0.494096864172033,1.75934646160189,0.397912944082302,1.55971269695296,0.898819408654221,1.51296634912286,1.59313018603494,1.89667900953082,2.97046132785295,2.25415471346161,2.44381593414377,2.71533482034676,3.15611189506434,2.46622494784603,1.62371162777562,1.41298855057237,2.22114895059241,2.07516838961004,2.16898637430922,1.57247196090562,3.37293168577281,1.62288097110802,1.20588579876208,3.05551022137704,2.01387296215567,4.05338066937588,3.0201755450689,1.43768206527355,3.34926852901653,4.99260276983297,3.78868316920668,1.97337154874103,3.37710464954357,9.79191907883005,3.41084541186873,1.95557971730431,2.37643120085263,4.22442446919304,3.85264392116176,3.80869825417622,12.0982861671835,12.7684466726015,13.2878813789265,12.118562417969,9.5040722535128,9.84304396635605,14.0309586824066,0,1.63171705145613,0.491764273019036,0.827810238914197,0.481651769963376,1.17211686592203,0.983609672260053,0.757412781613119,1.57754109708128,1.56175497718655,2.15423397732799,4.54040716109849,2.22798674082394,2.54768877709949,0.809621403349789,1.16902343164525,3.16230222357219,0.321321316421807,0.851640511249612,2.49291845134157,3.09485222771795,2.47455184458803,0,1.21390318077491,1.209294227859,1.32023555829129,0.590603785761546,1.53717573971964,1.29214146584111,0.727067458955011,1.78248689192361,0.316036757935816,2.10837217149998,1.03135543248187,1.70219802876894,3.78128297465751,3.88076051348264,2.57204442037911,2.48276327099183,3.21063871683727,1.81003922662333,2.43571959291679,1.17335854031855,1.69465656691056,0.882113592219848,1.81374878235628,3.06782410722221,1.44751019827574,1.55184047204077,1.80554989719567,0.582961673259701,0.741701208042039,0.512612642393558,1.44470807574256,1.66675074632741,1.13021074202815,1.23024804948923,0.915112692826091,1.35982743995084,1.53946597556024,2.62579950228405,0,4.4287039101359,1.82987520414164,0.972048067396211,0.209088296014469,0.87345025498471,1.48350781023303,1.81837602595739,2.35580347785627,1.03691978633434,0.621339313086926,0,3.58839710505549,1.98550188548517,1.94451188344048,2.32487682259916,1.5206051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| |||
|short_description=p2@Tmem2 | |||
}} |
Revision as of 17:11, 13 September 2013
Short description: | p2@Tmem2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmem2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3176 |
Association with transcript: | 34bp_to_ENSMUST00000025663, ENSMUST00000096194, NM_001033759, NM_031997, uc008gzd.1, uc008gze.1, uc008gzf.1, uc008gzg.1, uc008gzh.1_5end |
EntrezGene: | Tmem2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 6.08e-09 | 17 |
thoracic segment organ | 6.08e-09 | 17 |
thoracic cavity | 6.08e-09 | 17 |
thoracic segment of trunk | 6.08e-09 | 17 |
respiratory primordium | 6.08e-09 | 17 |
endoderm of foregut | 6.08e-09 | 17 |
lung | 1.98e-07 | 14 |
respiratory tube | 1.98e-07 | 14 |
respiration organ | 1.98e-07 | 14 |
pair of lungs | 1.98e-07 | 14 |
lung primordium | 1.98e-07 | 14 |
lung bud | 1.98e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.