FFCP PHASE1:Mm9::chr19:55968827..55968868,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21416|HGNC=|MCL_coexpression_id=141|UniProt=D3Z002|association_with_transcript=-155bp_to_ENSMUST00000142291_5end|description=CAGE_peak_29_at_Tcf7l2_5end|id=chr19:55968827..55968868,+|ontology_enrichment_celltype=CL:0000117!9.14e-10!23;CL:0000337!9.14e-10!23;CL:0002613!5.25e-08!3;CL:0000120!1.11e-07!3;CL:0002610!1.42e-07!3|ontology_enrichment_celltype_v019_2=CL:0002613,1.16e-30,3;CL:0000120,3.42e-29,3;CL:0000117,1.08e-20,23;CL:0000337,1.08e-20,23;CL:0000540,2.11e-14,33;CL:0000047,2.11e-14,33;CL:0000031,2.11e-14,33;CL:0000404,2.11e-14,33;CL:0000393,3.64e-12,39;CL:0000211,3.64e-12,39;CL:0002319,5.10e-11,43;CL:0000221,9.17e-11,44;CL:0000133,9.17e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002420!1.42e-09!8;UBERON:0007245!1.42e-09!8;UBERON:0010009!1.42e-09!8;UBERON:0010011!1.42e-09!8;UBERON:0000454!1.42e-09!8;UBERON:0000369!8.19e-08!5;UBERON:0002435!8.19e-08!5;UBERON:0000204!8.19e-08!5;UBERON:0010082!8.19e-08!5;UBERON:0004684!1.42e-07!3;UBERON:0002275!1.42e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.02e-18,5;UBERON:0002435,1.02e-18,5;UBERON:0000204,1.02e-18,5;UBERON:0010082,1.02e-18,5;UBERON:0002420,5.86e-12,8;UBERON:0007245,5.86e-12,8;UBERON:0010009,5.86e-12,8;UBERON:0010011,5.86e-12,8;UBERON:0000454,5.86e-12,8;UBERON:0002259,5.74e-11,1;UBERON:0002314,5.74e-11,1;UBERON:0004061,5.74e-11,1;UBERON:0006777,5.74e-11,1;UBERON:0005882,5.74e-11,1;UBERON:0001017,2.51e-08,73;UBERON:0001016,4.28e-08,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,2.53532561402472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20231761998777,0.893811366596314,0.921639199537461,9.10015385338338,10.1551284398675,6.77187381723788,0.558365998002762,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9472783122627,0.457500602818626,0,0,0,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0.367687016900028,0,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0.38581844092741,0.824171801606613,0,0.342869252385415,0,0,0.145346416632329,0.282328141245992,0.169229215783353,0.548783918618318,0.526139422875686,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.385813221962283,1.49886346762768,0,0.429742108096597,0,0,0|short_description=p29@Tcf7l2}} | ||
|EntrezGene=21416 | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|UniProt=D3Z002 | |||
|association_with_transcript=-155bp_to_ENSMUST00000142291_5end | |||
|description=CAGE_peak_29_at_Tcf7l2_5end | |||
|id=chr19:55968827..55968868,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.14e-10!23;CL:0000337!9.14e-10!23;CL:0002613!5.25e-08!3;CL:0000120!1.11e-07!3;CL:0002610!1.42e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.16e-30,3;CL:0000120,3.42e-29,3;CL:0000117,1.08e-20,23;CL:0000337,1.08e-20,23;CL:0000540,2.11e-14,33;CL:0000047,2.11e-14,33;CL:0000031,2.11e-14,33;CL:0000404,2.11e-14,33;CL:0000393,3.64e-12,39;CL:0000211,3.64e-12,39;CL:0002319,5.10e-11,43;CL:0000221,9.17e-11,44;CL:0000133,9.17e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002420!1.42e-09!8;UBERON:0007245!1.42e-09!8;UBERON:0010009!1.42e-09!8;UBERON:0010011!1.42e-09!8;UBERON:0000454!1.42e-09!8;UBERON:0000369!8.19e-08!5;UBERON:0002435!8.19e-08!5;UBERON:0000204!8.19e-08!5;UBERON:0010082!8.19e-08!5;UBERON:0004684!1.42e-07!3;UBERON:0002275!1.42e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.02e-18,5;UBERON:0002435,1.02e-18,5;UBERON:0000204,1.02e-18,5;UBERON:0010082,1.02e-18,5;UBERON:0002420,5.86e-12,8;UBERON:0007245,5.86e-12,8;UBERON:0010009,5.86e-12,8;UBERON:0010011,5.86e-12,8;UBERON:0000454,5.86e-12,8;UBERON:0002259,5.74e-11,1;UBERON:0002314,5.74e-11,1;UBERON:0004061,5.74e-11,1;UBERON:0006777,5.74e-11,1;UBERON:0005882,5.74e-11,1;UBERON:0001017,2.51e-08,73;UBERON:0001016,4.28e-08,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,2.53532561402472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20231761998777,0.893811366596314,0.921639199537461,9.10015385338338,10.1551284398675,6.77187381723788,0.558365998002762,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9472783122627,0.457500602818626,0,0,0,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0.367687016900028,0,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0.38581844092741,0.824171801606613,0,0.342869252385415,0,0,0.145346416632329,0.282328141245992,0.169229215783353,0.548783918618318,0.526139422875686,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.385813221962283,1.49886346762768,0,0.429742108096597,0,0,0 | |||
|short_description=p29@Tcf7l2 | |||
}} |
Revision as of 18:07, 13 September 2013
Short description: | p29@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_29_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | -155bp_to_ENSMUST00000142291_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.16e-30 | 3 |
granule cell | 3.42e-29 | 3 |
CNS neuron (sensu Vertebrata) | 1.08e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-20 | 23 |
neuron | 2.11e-14 | 33 |
neuronal stem cell | 2.11e-14 | 33 |
neuroblast | 2.11e-14 | 33 |
electrically signaling cell | 2.11e-14 | 33 |
electrically responsive cell | 3.64e-12 | 39 |
electrically active cell | 3.64e-12 | 39 |
neural cell | 5.10e-11 | 43 |
ectodermal cell | 9.17e-11 | 44 |
neurectodermal cell | 9.17e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.02e-18 | 5 |
striatum | 1.02e-18 | 5 |
ventral part of telencephalon | 1.02e-18 | 5 |
future corpus striatum | 1.02e-18 | 5 |
basal ganglion | 5.86e-12 | 8 |
nuclear complex of neuraxis | 5.86e-12 | 8 |
aggregate regional part of brain | 5.86e-12 | 8 |
collection of basal ganglia | 5.86e-12 | 8 |
cerebral subcortex | 5.86e-12 | 8 |
corpora quadrigemina | 5.74e-11 | 1 |
midbrain tectum | 5.74e-11 | 1 |
neural tube mantle layer | 5.74e-11 | 1 |
tectal plate | 5.74e-11 | 1 |
neural tube alar plate | 5.74e-11 | 1 |
central nervous system | 2.51e-08 | 73 |
nervous system | 4.28e-08 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.