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FFCP PHASE1:Mm9::chr19:58529749..58529814,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=14585|HGNC=|UniProt=P97785,E9Q0F7|association_with_transcript=0bp_to_ENSMUST00000152507,ENSMUST00000166573_5end|description=CAGE_peak_1_at_Gfra1_5end|id=chr19:58529749..58529814,-|ontology_enrichment_celltype=CL:0000540!5.17e-12!33;CL:0000047!5.17e-12!33;CL:0000031!5.17e-12!33;CL:0000404!5.17e-12!33;CL:0000221!2.75e-11!44;CL:0000133!2.75e-11!44;CL:0002319!7.18e-11!43;CL:0000393!8.41e-08!39;CL:0000211!8.41e-08!39;CL:0000055!1.27e-07!50;CL:0000107!1.31e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,5.73e-12,33;CL:0000047,5.73e-12,33;CL:0000031,5.73e-12,33;CL:0000404,5.73e-12,33;CL:0000221,3.65e-11,44;CL:0000133,3.65e-11,44;CL:0002319,9.98e-11,43;CL:0000107,4.94e-08,9;CL:0000393,7.75e-08,39;CL:0000211,7.75e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.75e-12!75;UBERON:0001016!1.75e-12!75;UBERON:0001017!1.65e-11!73;UBERON:0005743!1.65e-11!73;UBERON:0004121!1.84e-10!102;UBERON:0000924!1.84e-10!102;UBERON:0006601!1.84e-10!102;UBERON:0000010!1.05e-08!11;UBERON:0000475!2.63e-08!200;UBERON:0002410!1.31e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.24e-12,75;UBERON:0001017,2.30e-11,73;UBERON:0004121,9.54e-11,95;UBERON:0000924,9.54e-11,95;UBERON:0006601,9.54e-11,95;UBERON:0000010,3.35e-09,11;UBERON:0002410,4.94e-08,9;UBERON:0011216,5.03e-08,194;UBERON:0002346,1.24e-07,64;UBERON:0003075,1.24e-07,64;UBERON:0007284,1.24e-07,64|phase1_expression=6.72625157840135,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.274228867211478,0.42438965179803,1.7008658030214,20.0567721425788,23.5079810225042,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0.485510353031154,0.125896817975577,0.608261587317087,0.183546752161682,0,1.30815093828268,1.31811709640683,1.36100929351998,0.839918529752175,1.43752564364972,0.167782606057736,0,0,0,0,0,11.9366711907163,17.4567023159771,10.775133859605,0,0.889294796111139,0,0,0,3.59520132622086,3.07374644257244,0.829516898467821,0.675029691658453,0.630974884054146,19.4242669394586,13.693849539,1.46988959057945,1.91690942036473,0,8.8092704799511,9.3211756802187,12.2885226604995,8.96826756565318,8.23388792421687,5.73004707612436,6.42120897703176,7.31591393041184,9.47349136216223,22.9810296669461,17.0846016958924,19.9447407033072,16.3568577599678,17.0036010240267,0,3.44169550792555,6.79971333707751,4.31762553310254,4.54843492213368,11.2006721774334,1.54488862144927,1.02258193546835,0,0,9.15482228548423,0,0,0,0.216491041011214,0,0,3.88225191044804,0.517875767294343,0.445326417194474,1.73485326766136,1.82679286987285,1.84492397804847,0.60289056221049,0.823120949949934,0.251333182659351,0,0,1.76922110389975,1.13236794963186,2.42925670306433,1.45462575940567,3.72783522436244,0,0.209446706813455,0.255457055208591,0,0,0,10.1857634795279,7.77751024791665,3.8952849154988,4.86708096538374,2.81287003063364,12.8828587626927,8.4365456795234,1.42575109390443,6.34475550111474,17.4378703319236,1.68353484709179,5.33493816147085,3.21862946206862,4.32149111532838,4.52114453507145,7.48401490664606,7.17436833595159,7.21503279109912,5.17406741478031,0.646703978798527,3.78212160335639,2.63926686245923,3.06874025398605,2.22437799380478,1.39300866608867,0.411564272815887,1.99034266818493,0,0,0,0.828503090142008,1.40715635988658,0.900310307305074,2.3674473558521,0.393528463494808,0.462801338662135,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,0,0.134206418760372,6.9395683026162,3.2929475961371,0.660837565967596,0.264450566663544,9.38468302355029,10.4506502337197,4.25262622362908,2.21851877085677,2.00140239460383,2.47293313946327,0.949058123089023,1.64698954724011,1.25667604400135,0.994782360205754,0.58489226135736,0,0.216138049874694,0,16.8804431848243,11.5390997735826,23.6686244913469,11.4044743593376,9.69762435838129,13.7466206985024,0.822074982615345,0.147610147979602,0,0.123397163921801,5.03969466048153,2.16898637430922,1.17935397067922,2.69834534861824,3.04290182082754,3.13530307678142,1.78238096246994,3.16465751195892,8.75530224585191,2.74561413188081,5.75072826109418,5.95425516269605,3.12037673114561,4.2938409251009,3.58794827043824,16.8855232477179,1.66277871149944,2.84237117655727,2.93336957595647,1.86719594352707,0.938760993154008,1.17254380209271,1.19021820443007,1.95133647857799,1.89162172927429,1.32878813789265,0.478364305972461,0.983179888294428,1.55416483679306,1.88043776155965,0,0,0,0,7.22477654945064,8.43924143463863,0,0.757412781613119,32.4973465998744,31.2350995437311,48.6856878876126,28.1983181584011,30.0778210011232,34.8184132870264,25.9078849071932,35.65521466518,31.6230222357219,2.89189184779626,0.425820255624806,1.06839362200353,0.651547837414304,0.164970122972535,0,5.82673526771955,7.55808892411878,10.7504895460862,7.67784921490009,5.53383266299069,3.35956781118687,3.99887102425256,3.20847640546249,5.37262488490887,3.16255825724996,3.09406629744561,3.40439605753788,2.70091641046965,1.16422815404479,1.28602221018955,0.886701168211368,3.0322698992352,4.11372551505302,6.69822888052118,0,0,0.220528398054962,0.65954501176592,0.807322133479528,1.08563264870681,0.596861720015682,0.492422699235184,0,9.08583979851498,0,2.68302928352189,0.925972636848558,0.753473828018764,0.546776910884101,0,0.509935289981566,0.279902904647316,0.276399947608848,0,21.0363435731455,10.1659733563424,4.96824567780286,2.50905955217362,1.74690050996942,1.75323650300267,1.57041565878138,1.30877970992015,0.388844919875379,0.621339313086926,0,0,0.66183396182839,0.583353565032143,0.645799117388655,0.337912250981556,0.469428954583016,0.39061315453185,0.838874755405687,0,0,5.68820017130721,8.5144590421869,17.0500188893613,28.7125018780927,21.3041767844303,14.3050575442511,11.658958603437,9.89519832069667,11.2072759442444,14.098259231175,7.56196388526304,5.26272555994663,6.06134602334076,3.15567635890236,0.906921534460845,0,0.0897138566094757,0,2.12508553435409,0,1.28206136987086,0.643105137237198,0.501572104035363,0,4.14292712856459,2.86447756719698,1.3748254587495,8.22099023724771,1.5107877947794,1.35004500046361,0.45032120322422,1.81256963593682,1.55328093525546,1.66059756134683,6.3843979744165,5.63420898988643,3.40349403895612,1.46729213839588,1.83843508450014,3.11145418922261,1.64828045791115,2.56735367673452,0.758091635291392,1.52087579934144,2.45214243801899,3.55837728385553,2.94515701062399,2.69946704091382,1.90517476513229,3.01299247456624,3.27945674788299,2.06042950401653,1.76638704161277,2.05721551431249,2.12970967391205,1.43061713968393,2.61623549938191,2.91739079287525,3.04612588410035,2.74391959309159,3.41990624869196,2.8518863907631,3.92799590160417,2.84724043498018,2.9551344712669,2.04615521584845,3.25367366490529,4.24394544158511,3.74715866906919,3.50897412668113,2.57845264857958,1.72159498861959,2.20591419119516,1.39120701372253|short_description=p1@Gfra1}}
|EntrezGene=14585
|HGNC=
|UniProt=P97785,E9Q0F7
|association_with_transcript=0bp_to_ENSMUST00000152507,ENSMUST00000166573_5end
|description=CAGE_peak_1_at_Gfra1_5end
|id=chr19:58529749..58529814,-
|ontology_enrichment_celltype=CL:0000540!5.17e-12!33;CL:0000047!5.17e-12!33;CL:0000031!5.17e-12!33;CL:0000404!5.17e-12!33;CL:0000221!2.75e-11!44;CL:0000133!2.75e-11!44;CL:0002319!7.18e-11!43;CL:0000393!8.41e-08!39;CL:0000211!8.41e-08!39;CL:0000055!1.27e-07!50;CL:0000107!1.31e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,5.73e-12,33;CL:0000047,5.73e-12,33;CL:0000031,5.73e-12,33;CL:0000404,5.73e-12,33;CL:0000221,3.65e-11,44;CL:0000133,3.65e-11,44;CL:0002319,9.98e-11,43;CL:0000107,4.94e-08,9;CL:0000393,7.75e-08,39;CL:0000211,7.75e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.75e-12!75;UBERON:0001016!1.75e-12!75;UBERON:0001017!1.65e-11!73;UBERON:0005743!1.65e-11!73;UBERON:0004121!1.84e-10!102;UBERON:0000924!1.84e-10!102;UBERON:0006601!1.84e-10!102;UBERON:0000010!1.05e-08!11;UBERON:0000475!2.63e-08!200;UBERON:0002410!1.31e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.24e-12,75;UBERON:0001017,2.30e-11,73;UBERON:0004121,9.54e-11,95;UBERON:0000924,9.54e-11,95;UBERON:0006601,9.54e-11,95;UBERON:0000010,3.35e-09,11;UBERON:0002410,4.94e-08,9;UBERON:0011216,5.03e-08,194;UBERON:0002346,1.24e-07,64;UBERON:0003075,1.24e-07,64;UBERON:0007284,1.24e-07,64
|phase1_expression=6.72625157840135,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.274228867211478,0.42438965179803,1.7008658030214,20.0567721425788,23.5079810225042,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0.485510353031154,0.125896817975577,0.608261587317087,0.183546752161682,0,1.30815093828268,1.31811709640683,1.36100929351998,0.839918529752175,1.43752564364972,0.167782606057736,0,0,0,0,0,11.9366711907163,17.4567023159771,10.775133859605,0,0.889294796111139,0,0,0,3.59520132622086,3.07374644257244,0.829516898467821,0.675029691658453,0.630974884054146,19.4242669394586,13.693849539,1.46988959057945,1.91690942036473,0,8.8092704799511,9.3211756802187,12.2885226604995,8.96826756565318,8.23388792421687,5.73004707612436,6.42120897703176,7.31591393041184,9.47349136216223,22.9810296669461,17.0846016958924,19.9447407033072,16.3568577599678,17.0036010240267,0,3.44169550792555,6.79971333707751,4.31762553310254,4.54843492213368,11.2006721774334,1.54488862144927,1.02258193546835,0,0,9.15482228548423,0,0,0,0.216491041011214,0,0,3.88225191044804,0.517875767294343,0.445326417194474,1.73485326766136,1.82679286987285,1.84492397804847,0.60289056221049,0.823120949949934,0.251333182659351,0,0,1.76922110389975,1.13236794963186,2.42925670306433,1.45462575940567,3.72783522436244,0,0.209446706813455,0.255457055208591,0,0,0,10.1857634795279,7.77751024791665,3.8952849154988,4.86708096538374,2.81287003063364,12.8828587626927,8.4365456795234,1.42575109390443,6.34475550111474,17.4378703319236,1.68353484709179,5.33493816147085,3.21862946206862,4.32149111532838,4.52114453507145,7.48401490664606,7.17436833595159,7.21503279109912,5.17406741478031,0.646703978798527,3.78212160335639,2.63926686245923,3.06874025398605,2.22437799380478,1.39300866608867,0.411564272815887,1.99034266818493,0,0,0,0.828503090142008,1.40715635988658,0.900310307305074,2.3674473558521,0.393528463494808,0.462801338662135,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,0,0.134206418760372,6.9395683026162,3.2929475961371,0.660837565967596,0.264450566663544,9.38468302355029,10.4506502337197,4.25262622362908,2.21851877085677,2.00140239460383,2.47293313946327,0.949058123089023,1.64698954724011,1.25667604400135,0.994782360205754,0.58489226135736,0,0.216138049874694,0,16.8804431848243,11.5390997735826,23.6686244913469,11.4044743593376,9.69762435838129,13.7466206985024,0.822074982615345,0.147610147979602,0,0.123397163921801,5.03969466048153,2.16898637430922,1.17935397067922,2.69834534861824,3.04290182082754,3.13530307678142,1.78238096246994,3.16465751195892,8.75530224585191,2.74561413188081,5.75072826109418,5.95425516269605,3.12037673114561,4.2938409251009,3.58794827043824,16.8855232477179,1.66277871149944,2.84237117655727,2.93336957595647,1.86719594352707,0.938760993154008,1.17254380209271,1.19021820443007,1.95133647857799,1.89162172927429,1.32878813789265,0.478364305972461,0.983179888294428,1.55416483679306,1.88043776155965,0,0,0,0,7.22477654945064,8.43924143463863,0,0.757412781613119,32.4973465998744,31.2350995437311,48.6856878876126,28.1983181584011,30.0778210011232,34.8184132870264,25.9078849071932,35.65521466518,31.6230222357219,2.89189184779626,0.425820255624806,1.06839362200353,0.651547837414304,0.164970122972535,0,5.82673526771955,7.55808892411878,10.7504895460862,7.67784921490009,5.53383266299069,3.35956781118687,3.99887102425256,3.20847640546249,5.37262488490887,3.16255825724996,3.09406629744561,3.40439605753788,2.70091641046965,1.16422815404479,1.28602221018955,0.886701168211368,3.0322698992352,4.11372551505302,6.69822888052118,0,0,0.220528398054962,0.65954501176592,0.807322133479528,1.08563264870681,0.596861720015682,0.492422699235184,0,9.08583979851498,0,2.68302928352189,0.925972636848558,0.753473828018764,0.546776910884101,0,0.509935289981566,0.279902904647316,0.276399947608848,0,21.0363435731455,10.1659733563424,4.96824567780286,2.50905955217362,1.74690050996942,1.75323650300267,1.57041565878138,1.30877970992015,0.388844919875379,0.621339313086926,0,0,0.66183396182839,0.583353565032143,0.645799117388655,0.337912250981556,0.469428954583016,0.39061315453185,0.838874755405687,0,0,5.68820017130721,8.5144590421869,17.0500188893613,28.7125018780927,21.3041767844303,14.3050575442511,11.658958603437,9.89519832069667,11.2072759442444,14.098259231175,7.56196388526304,5.26272555994663,6.06134602334076,3.15567635890236,0.906921534460845,0,0.0897138566094757,0,2.12508553435409,0,1.28206136987086,0.643105137237198,0.501572104035363,0,4.14292712856459,2.86447756719698,1.3748254587495,8.22099023724771,1.5107877947794,1.35004500046361,0.45032120322422,1.81256963593682,1.55328093525546,1.66059756134683,6.3843979744165,5.63420898988643,3.40349403895612,1.46729213839588,1.83843508450014,3.11145418922261,1.64828045791115,2.56735367673452,0.758091635291392,1.52087579934144,2.45214243801899,3.55837728385553,2.94515701062399,2.69946704091382,1.90517476513229,3.01299247456624,3.27945674788299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|short_description=p1@Gfra1
}}

Revision as of 18:14, 13 September 2013

Short description:p1@Gfra1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gfra1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000152507, ENSMUST00000166573_5end
EntrezGene:Gfra1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gfra1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H220.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I923.51
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C311.94
Mouse Granule cells, donor2.CNhs12357.11731-123E317.46
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.69
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.97
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.98
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.94
Mouse Schwann, donor1.CNhs12507.11728-123D916.36
Mouse Schwann, donor2.CNhs12573.11746-123F917.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.88
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.19
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F212.88
diencephalon, neonate N30.CNhs11201.1388-42B28.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.34
epididymis, adult.CNhs10490.58-23B217.44
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C65.33
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C67.48
eyeball, neonate N01.CNhs11140.1532-43E77.17
eyeball, neonate N02.CNhs11205.1551-44G87.22
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I59.38
intestine, embryo E13.CNhs11010.381-16D510.45
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I916.88
kidney, embryo E15.CNhs10997.434-16F811.54
kidney, embryo E16.CNhs10584.464-22A523.67
kidney, embryo E17.CNhs11028.483-18I211.40
kidney, embryo E18.CNhs11001.1288-20C79.70
kidney, neonate N00.CNhs11214.646-21G713.75
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F48.76
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D116.89
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.22
medulla oblongata, neonate N30.CNhs11200.1396-42A38.44
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E132.50
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E231.24
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E348.69
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D728.20
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D830.08
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D934.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D425.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D535.66
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D631.62
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F27.56
pancreas, embryo E16.CNhs11003.460-26E510.75
pancreas, embryo E17.CNhs10599.1558-45G37.68
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C99.09
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E321.04
stomach, embryo E15.CNhs10603.1252-16G810.17
stomach, embryo E16.CNhs11022.459-17D44.97
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I48.51
thymus, embryo E15.CNhs11005.430-45I217.05
thymus, embryo E16.CNhs11002.456-26C528.71
thymus, embryo E17.CNhs10581.478-18C121.30
thymus, embryo E18.CNhs10595.1273-19G414.31
thymus, neonate N02.CNhs11181.1541-43F811.66
thymus, neonate N03.CNhs11137.2104-43C79.90
thymus, neonate N06.CNhs11197.681-26C411.21
thymus, neonate N07.CNhs11211.713-19D314.10
thymus, neonate N10.CNhs11194.748-24E47.56
thymus, neonate N20.CNhs11186.820-7A25.26
thymus, neonate N25.CNhs11125.1362-25G76.06
thymus, neonate N30.CNhs11132.1393-42G23.16
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H25.63
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.73e-1233
neuronal stem cell5.73e-1233
neuroblast5.73e-1233
electrically signaling cell5.73e-1233
ectodermal cell3.65e-1144
neurectodermal cell3.65e-1144
neural cell9.98e-1143
autonomic neuron4.94e-089
electrically responsive cell7.75e-0839
electrically active cell7.75e-0839

Uber anatomy
Ontology termp-valuen
nervous system2.24e-1275
central nervous system2.30e-1173
ectoderm-derived structure9.54e-1195
ectoderm9.54e-1195
presumptive ectoderm9.54e-1195
peripheral nervous system3.35e-0911
autonomic nervous system4.94e-089
organ system subdivision5.03e-08194
neurectoderm1.24e-0764
neural plate1.24e-0764
presumptive neural plate1.24e-0764







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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