FFCP PHASE1:Hg19::chr6:15424379..15424384,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C6|description=CAGE_peak_at_chr6:15424379..15424384,+|id=chr6:15424379..15424384,+|ontology_enrichment_celltype=CL:0000037!1.33e-16!172;CL:0000566!1.33e-16!172;CL:0000988!1.40e-14!182;CL:0000738!2.76e-14!140;CL:0002032!1.09e-13!165;CL:0000837!1.09e-13!165;CL:0002057!9.14e-11!42;CL:0000763!1.34e-10!112;CL:0000049!1.34e-10!112;CL:0002031!2.24e-10!124;CL:0002087!1.75e-09!119;CL:0000860!2.18e-09!45;CL:0000766!4.20e-09!76;CL:0000839!9.65e-08!70;CL:0000557!1.62e-07!71|ontology_enrichment_celltype_v019=CL:0002393;1.03e-13;6!CL:0002397;1.03e-13;6!CL:0000775;3.18e-12;3!CL:0000511;4.86e-10;1!CL:0002625;4.86e-10;1!CL:0000216;4.86e-10;1!CL:0000094;5.33e-10;8!CL:0000576;2.62e-08;48!CL:0000081;2.11e-07;11|ontology_enrichment_celltype_v019_2=CL:0000775,2.27e-12,3;CL:0000766,3.91e-12,72;CL:0000860,8.18e-12,42;CL:0002057,8.18e-12,42;CL:0000763,9.31e-11,108;CL:0000049,9.31e-11,108;CL:0000473,3.32e-10,48;CL:0000234,3.32e-10,48;CL:0000094,4.79e-10,8;CL:0000511,4.87e-10,1;CL:0002625,4.87e-10,1;CL:0000216,4.87e-10,1;CL:0002393,2.62e-09,9;CL:0002397,2.62e-09,9;CL:0000037,1.64e-08,168;CL:0000738,4.23e-08,136;CL:0002194,5.94e-08,59;CL:0000576,5.94e-08,59;CL:0000040,5.94e-08,59;CL:0000559,5.94e-08,59;CL:0000988,6.03e-08,177;CL:0002032,1.14e-07,161;CL:0000837,1.14e-07,161;CL:0002009,1.16e-07,61;CL:0000081,1.95e-07,11;CL:0000839,5.19e-07,66;CL:0000557,6.82e-07,67|ontology_enrichment_development_v019=CL:0002057;4.20e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.56e-08!102;UBERON:0003061!7.56e-08!102|ontology_enrichment_uberon_v019=UBERON:0001136;4.86e-10;1!UBERON:0001343;4.86e-10;1!UBERON:0004910;4.86e-10;1!UBERON:0004813;4.86e-10;1!UBERON:0007029;1.30e-09;1|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.87e-10,1;UBERON:0001343,4.87e-10,1;UBERON:0004910,4.87e-10,1;UBERON:0005154,4.87e-10,1;UBERON:0005295,4.87e-10,1;UBERON:0004813,4.87e-10,1;UBERON:0005297,4.87e-10,1;UBERON:0005294,4.87e-10,1;UBERON:0010141,4.87e-10,1;UBERON:0005891,4.87e-10,1;UBERON:0007029,8.91e-10,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.305653622991805,0.246301768349837,0.314843125254717,0.393364276848904,1.15148819429164,0.309632246632152,0,0,0,0,0,0.293600439334847,12.7418943962332,5.61524452916397,4.99125002646459,0,0,0,0.436194716338694,0.755751887377619,0,0.232429036905685,1.23350366406548,0,1.1507695692886,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.941211697713023,0.545812300115692,0.224723484445085,0.612167784741805,0,0,0,0,0,0.290209238628584,0.56738522469114,0.622822248995575,1.00499466102697,1.5644487552606,0.65156653411535,1.81619850790011,0,0,0,0,0.419317291016752,0.112328631146495,0.450530678524519,0.16072558669708,0.285012743741249,0.79566670879636,0,0,0,0,0,0,0,0.661044872784862,0.954053754535364,0.569212969109448,0.587237189370939,1.14681968437569,0,1.12101712596307,0,0,0.786021525498329,0.205601498999509,0,0,0.473447805734733,0,0,0,0.443067789167242,0,0.384273959177026,0.130059347559878,0.822189523018381,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0.950452044448374,0,0,0,0.236777252044017,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.132529768321485,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0.16798212819886,0,0,0,0,0.492663237895943,0.088048434013226,0.829312462163088,0.720599767084807,0.25248486685276,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.394061520403854,0.862510299438069,0.385029108839245,0,0,0,0.167516265334349,0,1.49801404789436,2.99161459204025,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,2.15714200818617,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0.328014645699706,0,0.103041011647722,0.366277859273374,0.330037999682352,0,0.650060246036521,3.21367859688319,0,0.154048617114644,0,0.137836572484531,0,0,0.085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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr6:15424379..15424384,+ | |||
|id=chr6:15424379..15424384,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.33e-16!172;CL:0000566!1.33e-16!172;CL:0000988!1.40e-14!182;CL:0000738!2.76e-14!140;CL:0002032!1.09e-13!165;CL:0000837!1.09e-13!165;CL:0002057!9.14e-11!42;CL:0000763!1.34e-10!112;CL:0000049!1.34e-10!112;CL:0002031!2.24e-10!124;CL:0002087!1.75e-09!119;CL:0000860!2.18e-09!45;CL:0000766!4.20e-09!76;CL:0000839!9.65e-08!70;CL:0000557!1.62e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.03e-13;6!CL:0002397;1.03e-13;6!CL:0000775;3.18e-12;3!CL:0000511;4.86e-10;1!CL:0002625;4.86e-10;1!CL:0000216;4.86e-10;1!CL:0000094;5.33e-10;8!CL:0000576;2.62e-08;48!CL:0000081;2.11e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.27e-12,3;CL:0000766,3.91e-12,72;CL:0000860,8.18e-12,42;CL:0002057,8.18e-12,42;CL:0000763,9.31e-11,108;CL:0000049,9.31e-11,108;CL:0000473,3.32e-10,48;CL:0000234,3.32e-10,48;CL:0000094,4.79e-10,8;CL:0000511,4.87e-10,1;CL:0002625,4.87e-10,1;CL:0000216,4.87e-10,1;CL:0002393,2.62e-09,9;CL:0002397,2.62e-09,9;CL:0000037,1.64e-08,168;CL:0000738,4.23e-08,136;CL:0002194,5.94e-08,59;CL:0000576,5.94e-08,59;CL:0000040,5.94e-08,59;CL:0000559,5.94e-08,59;CL:0000988,6.03e-08,177;CL:0002032,1.14e-07,161;CL:0000837,1.14e-07,161;CL:0002009,1.16e-07,61;CL:0000081,1.95e-07,11;CL:0000839,5.19e-07,66;CL:0000557,6.82e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;4.20e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.56e-08!102;UBERON:0003061!7.56e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;4.86e-10;1!UBERON:0001343;4.86e-10;1!UBERON:0004910;4.86e-10;1!UBERON:0004813;4.86e-10;1!UBERON:0007029;1.30e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.87e-10,1;UBERON:0001343,4.87e-10,1;UBERON:0004910,4.87e-10,1;UBERON:0005154,4.87e-10,1;UBERON:0005295,4.87e-10,1;UBERON:0004813,4.87e-10,1;UBERON:0005297,4.87e-10,1;UBERON:0005294,4.87e-10,1;UBERON:0010141,4.87e-10,1;UBERON:0005891,4.87e-10,1;UBERON:0007029,8.91e-10,1 | |||
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| |||
|short_description=p@chr6:15424379..15424384,+ | |||
}} |
Revision as of 18:51, 13 September 2013
Short description: | p@chr6:15424379..15424384, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:15424379..15424384, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.27e-12 | 3 |
myeloid leukocyte | 3.91e-12 | 72 |
classical monocyte | 8.18e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.18e-12 | 42 |
myeloid cell | 9.31e-11 | 108 |
common myeloid progenitor | 9.31e-11 | 108 |
defensive cell | 3.32e-10 | 48 |
phagocyte | 3.32e-10 | 48 |
granulocyte | 4.79e-10 | 8 |
androgen binding protein secreting cell | 4.87e-10 | 1 |
seminiferous tubule epithelial cell | 4.87e-10 | 1 |
Sertoli cell | 4.87e-10 | 1 |
intermediate monocyte | 2.62e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.62e-09 | 9 |
hematopoietic stem cell | 1.64e-08 | 168 |
leukocyte | 4.23e-08 | 136 |
monopoietic cell | 5.94e-08 | 59 |
monocyte | 5.94e-08 | 59 |
monoblast | 5.94e-08 | 59 |
promonocyte | 5.94e-08 | 59 |
hematopoietic cell | 6.03e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.14e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-07 | 161 |
macrophage dendritic cell progenitor | 1.16e-07 | 61 |
blood cell | 1.95e-07 | 11 |
myeloid lineage restricted progenitor cell | 5.19e-07 | 66 |
granulocyte monocyte progenitor cell | 6.82e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 4.87e-10 | 1 |
seminiferous tubule of testis | 4.87e-10 | 1 |
epithelium of male gonad | 4.87e-10 | 1 |
epithelial cord | 4.87e-10 | 1 |
sex cord | 4.87e-10 | 1 |
seminiferous tubule epithelium | 4.87e-10 | 1 |
testis sex cord | 4.87e-10 | 1 |
genital ridge | 4.87e-10 | 1 |
primitive sex cord of indifferent gonad | 4.87e-10 | 1 |
coelomic epithelium | 4.87e-10 | 1 |
surface | 8.91e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.