FFCP PHASE1:Mm9::chr1:155596836..155596876,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=137|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:155596836..155596876,+|id=chr1:155596836..155596876,+|ontology_enrichment_celltype=CL:0000542!4.99e-07!13;CL:0000051!4.99e-07!13|ontology_enrichment_celltype_v019_2=CL:0000213,1.20e-12,1;CL:0002078,1.20e-12,1;CL:0000115,1.20e-12,1;CL:0002262,1.20e-12,1;CL:1000398,1.20e-12,1;CL:0000815,2.01e-12,1;CL:0000792,2.01e-12,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.20e-12,1;UBERON:0001281,1.20e-12,1;UBERON:0000353,1.20e-12,1;UBERON:0003497,1.20e-12,1;UBERON:0003909,1.20e-12,1;UBERON:0003928,1.20e-12,1;UBERON:0003835,1.20e-12,1;UBERON:0003513,1.20e-12,1;UBERON:0001280,1.20e-12,1;UBERON:0004647,1.20e-12,1;UBERON:0002294,1.20e-12,1;UBERON:0001173,1.20e-12,1;UBERON:0004912,1.20e-12,1;UBERON:0005171,1.20e-12,1|phase1_expression=0.160148847104794,0,0,0,0,0,0,3.61545305636414,0,0.234064526321993,0,0,1.19840510951844,0.524522414513984,0,0,0,0,0,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.408338712524738,1.25559489221072,0,0.523523743973798,5.29408339227913,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.191690942036473,1.83843757322004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85539261585705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0.339956859987711,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.302899349844443,0.0762068066549998,0.201652370273681,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr1:155596836..155596876,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=137 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:155596836..155596876,+ | |||
|id=chr1:155596836..155596876,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.99e-07!13;CL:0000051!4.99e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.20e-12,1;CL:0002078,1.20e-12,1;CL:0000115,1.20e-12,1;CL:0002262,1.20e-12,1;CL:1000398,1.20e-12,1;CL:0000815,2.01e-12,1;CL:0000792,2.01e-12,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.20e-12,1;UBERON:0001281,1.20e-12,1;UBERON:0000353,1.20e-12,1;UBERON:0003497,1.20e-12,1;UBERON:0003909,1.20e-12,1;UBERON:0003928,1.20e-12,1;UBERON:0003835,1.20e-12,1;UBERON:0003513,1.20e-12,1;UBERON:0001280,1.20e-12,1;UBERON:0004647,1.20e-12,1;UBERON:0002294,1.20e-12,1;UBERON:0001173,1.20e-12,1;UBERON:0004912,1.20e-12,1;UBERON:0005171,1.20e-12,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,3.61545305636414,0,0.234064526321993,0,0,1.19840510951844,0.524522414513984,0,0,0,0,0,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.408338712524738,1.25559489221072,0,0.523523743973798,5.29408339227913,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.191690942036473,1.83843757322004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85539261585705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0.339956859987711,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.302899349844443,0.0762068066549998,0.201652370273681,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr1:155596836..155596876,+ | |||
}} |
Revision as of 19:16, 13 September 2013
Short description: | p@chr1:155596836..155596876, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:155596836..155596876, + |
Coexpression cluster: | MCL_coexpression_mm9:137 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.20e-12 | 1 |
meso-epithelial cell | 1.20e-12 | 1 |
endothelial cell | 1.20e-12 | 1 |
endothelial cell of sinusoid | 1.20e-12 | 1 |
endothelial cell of hepatic sinusoid | 1.20e-12 | 1 |
regulatory T cell | 2.01e-12 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.01e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.20e-12 | 1 |
hepatic sinusoid | 1.20e-12 | 1 |
parenchyma | 1.20e-12 | 1 |
abdomen blood vessel | 1.20e-12 | 1 |
sinusoid | 1.20e-12 | 1 |
digestive system duct | 1.20e-12 | 1 |
abdominal segment blood vessel | 1.20e-12 | 1 |
trunk blood vessel | 1.20e-12 | 1 |
liver parenchyma | 1.20e-12 | 1 |
liver lobule | 1.20e-12 | 1 |
biliary system | 1.20e-12 | 1 |
biliary tree | 1.20e-12 | 1 |
biliary bud | 1.20e-12 | 1 |
hepatic duct | 1.20e-12 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.