FFCP PHASE1:Hg19::chr6:25930904..25930926,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10246|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10930|TSSclassifier=S|UniProt=A6NK81,O00624|association_with_transcript=19bp_to_ENST00000377850,NM_005835_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_SLC17A2_5end|id=chr6:25930904..25930926,-|ontology_enrichment_celltype=CL:0000181!1.97e-47!12;CL:0000417!1.97e-47!12;CL:0000668!1.97e-47!12;CL:0000414!1.97e-47!12;CL:0000412!1.97e-47!12;CL:0000182!1.97e-47!12;CL:0000223!6.13e-12!59|ontology_enrichment_celltype_v019=CL:0000182;6.83e-59;12|ontology_enrichment_celltype_v019_2=CL:0000182,6.83e-59,12;CL:0000223,3.09e-12,58|ontology_enrichment_development_v019=UBERON:0004161;1.22e-44;11!UBERON:0009497;7.78e-38;13!UBERON:0001041;1.48e-16;30!UBERON:0003104;5.40e-16;31!CL:0000223;3.65e-09;58|ontology_enrichment_disease=DOID:7!2.09e-07!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.18e-49!19;UBERON:0006925!3.18e-49!19;UBERON:0008836!3.18e-49!19;UBERON:0005057!5.31e-44!26;UBERON:0008835!2.14e-42!22;UBERON:0003894!2.14e-42!22;UBERON:0009854!1.63e-40!23;UBERON:0007499!3.33e-37!25;UBERON:0009497!3.33e-37!25;UBERON:0000015!3.33e-37!25;UBERON:0002423!3.33e-37!25;UBERON:0006235!3.33e-37!25;UBERON:0004161!3.33e-37!25;UBERON:0009856!9.73e-36!26;UBERON:0005172!2.94e-34!55;UBERON:0005173!2.94e-34!55;UBERON:0002417!9.80e-31!61;UBERON:0000916!9.80e-31!61;UBERON:0002365!7.94e-30!31;UBERON:0002330!7.94e-30!31;UBERON:0002368!2.61e-26!35;UBERON:0003929!1.32e-20!54;UBERON:0000949!3.02e-20!45;UBERON:0005177!8.15e-17!107;UBERON:0009569!7.85e-16!113;UBERON:0002530!3.37e-15!59;UBERON:0005911!3.79e-13!82;UBERON:0001041!8.71e-11!98;UBERON:0004921!1.60e-09!129;UBERON:0004185!1.60e-09!129;UBERON:0002405!6.57e-09!115;UBERON:0000466!4.27e-08!126;UBERON:0000077!8.32e-08!130;UBERON:0001007!1.11e-07!155;UBERON:0001555!1.11e-07!155;UBERON:0007026!1.11e-07!155;UBERON:0002100!2.02e-07!216;UBERON:0000490!2.80e-07!138;UBERON:0003914!4.77e-07!118;UBERON:0004119!6.36e-07!169;UBERON:0000925!6.36e-07!169;UBERON:0006595!6.36e-07!169|ontology_enrichment_uberon_v019=UBERON:0002107;5.80e-66;19!UBERON:0006925;5.80e-66;19!UBERON:0002423;3.92e-50;25!UBERON:0002365;7.10e-39;31!UBERON:0002330;7.10e-39;31!UBERON:0002368;2.89e-34;33!UBERON:0000949;4.87e-25;43!UBERON:0005172;6.20e-15;52!UBERON:0005173;6.20e-15;52!UBERON:0002417;4.60e-13;58!UBERON:0000916;4.60e-13;58!UBERON:0002530;6.15e-13;57!UBERON:0001007;3.86e-09;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.80e-66,19;UBERON:0006925,5.80e-66,19;UBERON:0008836,5.80e-66,19;UBERON:0008835,5.70e-57,22;UBERON:0003894,5.70e-57,22;UBERON:0009854,1.71e-54,23;UBERON:0007499,3.92e-50,25;UBERON:0009497,3.92e-50,25;UBERON:0000015,3.92e-50,25;UBERON:0002423,3.92e-50,25;UBERON:0006235,3.92e-50,25;UBERON:0004161,3.92e-50,25;UBERON:0009856,3.34e-48,26;UBERON:0002365,2.03e-40,31;UBERON:0002330,2.03e-40,31;UBERON:0002368,8.64e-36,35;UBERON:0000949,8.31e-28,45;UBERON:0003929,3.84e-23,54;UBERON:0005172,3.84e-23,54;UBERON:0005173,3.84e-23,54;UBERON:0002530,3.67e-21,59;UBERON:0002417,8.33e-21,60;UBERON:0000916,8.33e-21,60;UBERON:0005911,3.76e-15,82;UBERON:0001041,2.91e-14,87;UBERON:0005177,3.08e-12,101;UBERON:0009569,5.34e-11,112;UBERON:0003914,1.64e-10,117;UBERON:0004921,2.50e-10,118;UBERON:0005256,4.59e-10,122;UBERON:0001007,2.45e-08,145;UBERON:0001555,2.45e-08,145;UBERON:0007026,2.45e-08,145;UBERON:0000490,3.22e-08,148;UBERON:0001048,1.44e-07,160;UBERON:0003104,1.44e-07,160;UBERON:0009142,1.44e-07,160;UBERON:0004119,1.62e-07,160;UBERON:0000925,1.62e-07,160;UBERON:0006595,1.62e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.6185573125845,106.145339401184,50.8079319746008,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.78889610653362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6152693040884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10246 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10930 | |||
|TSSclassifier=S | |||
|UniProt=A6NK81,O00624 | |||
|association_with_transcript=19bp_to_ENST00000377850,NM_005835_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_SLC17A2_5end | |||
|id=chr6:25930904..25930926,- | |||
|ontology_enrichment_celltype=CL:0000181!1.97e-47!12;CL:0000417!1.97e-47!12;CL:0000668!1.97e-47!12;CL:0000414!1.97e-47!12;CL:0000412!1.97e-47!12;CL:0000182!1.97e-47!12;CL:0000223!6.13e-12!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.83e-59;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.83e-59,12;CL:0000223,3.09e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.22e-44;11!UBERON:0009497;7.78e-38;13!UBERON:0001041;1.48e-16;30!UBERON:0003104;5.40e-16;31!CL:0000223;3.65e-09;58 | |||
|ontology_enrichment_disease=DOID:7!2.09e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.18e-49!19;UBERON:0006925!3.18e-49!19;UBERON:0008836!3.18e-49!19;UBERON:0005057!5.31e-44!26;UBERON:0008835!2.14e-42!22;UBERON:0003894!2.14e-42!22;UBERON:0009854!1.63e-40!23;UBERON:0007499!3.33e-37!25;UBERON:0009497!3.33e-37!25;UBERON:0000015!3.33e-37!25;UBERON:0002423!3.33e-37!25;UBERON:0006235!3.33e-37!25;UBERON:0004161!3.33e-37!25;UBERON:0009856!9.73e-36!26;UBERON:0005172!2.94e-34!55;UBERON:0005173!2.94e-34!55;UBERON:0002417!9.80e-31!61;UBERON:0000916!9.80e-31!61;UBERON:0002365!7.94e-30!31;UBERON:0002330!7.94e-30!31;UBERON:0002368!2.61e-26!35;UBERON:0003929!1.32e-20!54;UBERON:0000949!3.02e-20!45;UBERON:0005177!8.15e-17!107;UBERON:0009569!7.85e-16!113;UBERON:0002530!3.37e-15!59;UBERON:0005911!3.79e-13!82;UBERON:0001041!8.71e-11!98;UBERON:0004921!1.60e-09!129;UBERON:0004185!1.60e-09!129;UBERON:0002405!6.57e-09!115;UBERON:0000466!4.27e-08!126;UBERON:0000077!8.32e-08!130;UBERON:0001007!1.11e-07!155;UBERON:0001555!1.11e-07!155;UBERON:0007026!1.11e-07!155;UBERON:0002100!2.02e-07!216;UBERON:0000490!2.80e-07!138;UBERON:0003914!4.77e-07!118;UBERON:0004119!6.36e-07!169;UBERON:0000925!6.36e-07!169;UBERON:0006595!6.36e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.80e-66;19!UBERON:0006925;5.80e-66;19!UBERON:0002423;3.92e-50;25!UBERON:0002365;7.10e-39;31!UBERON:0002330;7.10e-39;31!UBERON:0002368;2.89e-34;33!UBERON:0000949;4.87e-25;43!UBERON:0005172;6.20e-15;52!UBERON:0005173;6.20e-15;52!UBERON:0002417;4.60e-13;58!UBERON:0000916;4.60e-13;58!UBERON:0002530;6.15e-13;57!UBERON:0001007;3.86e-09;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.80e-66,19;UBERON:0006925,5.80e-66,19;UBERON:0008836,5.80e-66,19;UBERON:0008835,5.70e-57,22;UBERON:0003894,5.70e-57,22;UBERON:0009854,1.71e-54,23;UBERON:0007499,3.92e-50,25;UBERON:0009497,3.92e-50,25;UBERON:0000015,3.92e-50,25;UBERON:0002423,3.92e-50,25;UBERON:0006235,3.92e-50,25;UBERON:0004161,3.92e-50,25;UBERON:0009856,3.34e-48,26;UBERON:0002365,2.03e-40,31;UBERON:0002330,2.03e-40,31;UBERON:0002368,8.64e-36,35;UBERON:0000949,8.31e-28,45;UBERON:0003929,3.84e-23,54;UBERON:0005172,3.84e-23,54;UBERON:0005173,3.84e-23,54;UBERON:0002530,3.67e-21,59;UBERON:0002417,8.33e-21,60;UBERON:0000916,8.33e-21,60;UBERON:0005911,3.76e-15,82;UBERON:0001041,2.91e-14,87;UBERON:0005177,3.08e-12,101;UBERON:0009569,5.34e-11,112;UBERON:0003914,1.64e-10,117;UBERON:0004921,2.50e-10,118;UBERON:0005256,4.59e-10,122;UBERON:0001007,2.45e-08,145;UBERON:0001555,2.45e-08,145;UBERON:0007026,2.45e-08,145;UBERON:0000490,3.22e-08,148;UBERON:0001048,1.44e-07,160;UBERON:0003104,1.44e-07,160;UBERON:0009142,1.44e-07,160;UBERON:0004119,1.62e-07,160;UBERON:0000925,1.62e-07,160;UBERON:0006595,1.62e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.6185573125845,106.145339401184,50.8079319746008,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.78889610653362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6152693040884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38143776688512,5.19219907801349,4.65084452593876,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,51.2932817873289,10.6005511129777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@SLC17A2 | |||
}} |
Revision as of 19:44, 13 September 2013
Short description: | p1@SLC17A2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SLC17A2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 19bp_to_ENST00000377850, NM_005835_5end |
EntrezGene: | SLC17A2 |
HGNC: | 10930 |
UniProt: | A6NK81O00624 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.83e-59 | 12 |
endodermal cell | 3.09e-12 | 58 |
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