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FFCP PHASE1:Mm9::chr2:180976685..180976723,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=229003|HGNC=|MCL_coexpression_id=1308|UniProt=A2AS03|association_with_transcript=6bp_to_ENSMUST00000094203,ENSMUST00000155049_5end|description=CAGE_peak_1_at_BC006779_5end|id=chr2:180976685..180976723,-|ontology_enrichment_celltype=CL:0002031!3.17e-07!25|ontology_enrichment_celltype_v019_2=CL:0002031,2.72e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!7.28e-18!130;UBERON:0000925!7.28e-18!130;UBERON:0006595!7.28e-18!130;UBERON:0001007!2.04e-17!128;UBERON:0001555!2.04e-17!128;UBERON:0007026!2.04e-17!128;UBERON:0004921!1.34e-16!126;UBERON:0004185!1.34e-16!126;UBERON:0002405!2.21e-13!70;UBERON:0005911!2.83e-11!69;UBERON:0000490!2.46e-10!66;UBERON:0003929!7.86e-10!55;UBERON:0005057!3.23e-09!51;UBERON:0000077!3.54e-08!97;UBERON:0001041!4.42e-08!92;UBERON:0003104!6.43e-08!131;UBERON:0009142!6.43e-08!131;UBERON:0005409!1.51e-07!59;UBERON:0002193!1.53e-07!48;UBERON:0004923!2.02e-07!24;UBERON:0000160!4.48e-07!43;UBERON:0009854!4.58e-07!23;UBERON:0009856!4.58e-07!23;UBERON:0002365!8.68e-07!25;UBERON:0002330!8.68e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.00e-19,118;UBERON:0000925,5.00e-19,118;UBERON:0006595,5.00e-19,118;UBERON:0001007,1.39e-18,116;UBERON:0001555,1.39e-18,116;UBERON:0007026,1.39e-18,116;UBERON:0004921,9.49e-18,114;UBERON:0005911,2.20e-11,69;UBERON:0000490,1.93e-10,66;UBERON:0003929,6.10e-10,55;UBERON:0000160,3.18e-09,31;UBERON:0001041,5.51e-09,80;UBERON:0005409,5.69e-09,47;UBERON:0002193,1.22e-07,48;UBERON:0002405,1.22e-07,48;UBERON:0004923,1.99e-07,24;UBERON:0009854,4.52e-07,23;UBERON:0009856,4.52e-07,23;UBERON:0002365,8.57e-07,25;UBERON:0002330,8.57e-07,25;UBERON:0002107,9.92e-07,22;UBERON:0007499,9.92e-07,22;UBERON:0006925,9.92e-07,22;UBERON:0009497,9.92e-07,22;UBERON:0000015,9.92e-07,22;UBERON:0002423,9.92e-07,22;UBERON:0006235,9.92e-07,22;UBERON:0008835,9.92e-07,22;UBERON:0003894,9.92e-07,22;UBERON:0004161,9.92e-07,22;UBERON:0008836,9.92e-07,22|phase1_expression=1.44133962394315,78.1704913112169,53.2349110085757,138.226144567221,143.256178764655,25.1818907867835,34.8082834487333,64.0451684270218,41.5326730347417,56.8776798962444,12.8413476169129,11.1681022593471,74.1299160602121,70.7231055569689,32.9778664197506,34.2183201888806,13.9912375625629,118.14058092666,123.265875811559,105.67302329771,10.970584429488,9.53193131528499,11.7539905112521,34.0783860549956,29.5937972576649,35.0281498110162,35.7532456812032,35.1218109277999,27.1733489822615,22.6827116783938,15.299405235216,9.52546010189447,14.1464901144451,0,8.08784535303569,5.81821258754723,6.53341940039581,68.220655810116,46.0987853269042,57.5876118371178,105.881667845583,64.8893210710523,52.4351181273646,6.54663453473002,7.19776211658553,5.68994931701213,21.9069576417451,1.30815093828268,5.4921545683618,5.44403717407994,6.85933465964276,5.75010257459886,125.501389331187,79.7898356212479,70.243604020775,21.3525331909836,11.747871037489,21.6582278756526,0.202316460859598,0.528990979272033,0,5.76035704517525,20.4537803105562,15.7482450524245,20.7661936139065,18.4724829885986,5.09320187881288,3.07374644257244,0.414758449233911,0.405017814995072,0.420649922702764,0.856952953211411,1.10434270475807,0,0.287536413054709,0,0,1.53224805702225,1.68967186581868,0.527545150920775,0.548925861614458,1.04182674111352,1.67509799400829,1.12552522006336,1.5279824777681,0.883885756421003,0.711858403995515,0.372798891650601,9.16286939331527,14.2074533000757,72.1762576867178,30.9752595713299,6.11974200336975,34.5410042648203,64.9776417447669,57.347441548459,15.308441794361,2.55645483867087,1.81850203222008,1.06001872353102,1.83096445709685,1.28326477414318,0,0,3.46385665617943,3.80039798212648,6.0662933401774,21.009833868307,117.298861292169,14.2504453502232,3.46970653532272,5.1759131313064,5.76538743140146,16.4287678202359,10.9357497636205,12.6923257242972,27.4386414185155,20.2439099687876,13.2691582792481,5.01477234836968,10.6003928860989,13.5765070877862,31.6865994070808,1.17112318804619,0.83778682725382,48.792297544841,7.42853771936706,5.99902730993408,9.53026703047985,2.24685959107234,3.20250421973039,0.251308704225729,0.869121600961382,2.55715457330331,2.0778804455956,2.59586020908412,3.46253837091075,15.0532434438213,2.77995034277042,3.78795340595653,1.30120442962704,0.459804208866946,0.540186389416048,2.10986744970001,1.97305847538851,0.896796041993948,1.3118241438362,2.58703370739016,1.29340795759705,1.89106080167819,3.16712023495108,1.7535658594206,3.05851974148158,2.78601733217733,4.32142486456681,1.19420560091096,4.91549231119264,6.43369767786788,6.25159698670304,1.65700618028402,2.34526059981096,1.62055855314913,4.49814997611899,3.93528463494808,2.1597395804233,4.41814495025775,8.58474884478781,8.05680862333469,5.75959474697182,10.6708851651412,10.133601193232,10.2339991197733,17.124908992702,18.9231050452124,1.89260953707715,0.617427674275707,140.758401551098,89.9131926656051,1.70630600428187,3.71578674976702,4.63922860759536,11.0925938542838,20.903536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|EntrezGene=229003
|HGNC=
|MCL_coexpression_id=1308
|UniProt=A2AS03
|association_with_transcript=6bp_to_ENSMUST00000094203,ENSMUST00000155049_5end
|description=CAGE_peak_1_at_BC006779_5end
|id=chr2:180976685..180976723,-
|ontology_enrichment_celltype=CL:0002031!3.17e-07!25
|ontology_enrichment_celltype_v019_2=CL:0002031,2.72e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!7.28e-18!130;UBERON:0000925!7.28e-18!130;UBERON:0006595!7.28e-18!130;UBERON:0001007!2.04e-17!128;UBERON:0001555!2.04e-17!128;UBERON:0007026!2.04e-17!128;UBERON:0004921!1.34e-16!126;UBERON:0004185!1.34e-16!126;UBERON:0002405!2.21e-13!70;UBERON:0005911!2.83e-11!69;UBERON:0000490!2.46e-10!66;UBERON:0003929!7.86e-10!55;UBERON:0005057!3.23e-09!51;UBERON:0000077!3.54e-08!97;UBERON:0001041!4.42e-08!92;UBERON:0003104!6.43e-08!131;UBERON:0009142!6.43e-08!131;UBERON:0005409!1.51e-07!59;UBERON:0002193!1.53e-07!48;UBERON:0004923!2.02e-07!24;UBERON:0000160!4.48e-07!43;UBERON:0009854!4.58e-07!23;UBERON:0009856!4.58e-07!23;UBERON:0002365!8.68e-07!25;UBERON:0002330!8.68e-07!25
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.00e-19,118;UBERON:0000925,5.00e-19,118;UBERON:0006595,5.00e-19,118;UBERON:0001007,1.39e-18,116;UBERON:0001555,1.39e-18,116;UBERON:0007026,1.39e-18,116;UBERON:0004921,9.49e-18,114;UBERON:0005911,2.20e-11,69;UBERON:0000490,1.93e-10,66;UBERON:0003929,6.10e-10,55;UBERON:0000160,3.18e-09,31;UBERON:0001041,5.51e-09,80;UBERON:0005409,5.69e-09,47;UBERON:0002193,1.22e-07,48;UBERON:0002405,1.22e-07,48;UBERON:0004923,1.99e-07,24;UBERON:0009854,4.52e-07,23;UBERON:0009856,4.52e-07,23;UBERON:0002365,8.57e-07,25;UBERON:0002330,8.57e-07,25;UBERON:0002107,9.92e-07,22;UBERON:0007499,9.92e-07,22;UBERON:0006925,9.92e-07,22;UBERON:0009497,9.92e-07,22;UBERON:0000015,9.92e-07,22;UBERON:0002423,9.92e-07,22;UBERON:0006235,9.92e-07,22;UBERON:0008835,9.92e-07,22;UBERON:0003894,9.92e-07,22;UBERON:0004161,9.92e-07,22;UBERON:0008836,9.92e-07,22
|phase1_expression=1.44133962394315,78.1704913112169,53.2349110085757,138.226144567221,143.256178764655,25.1818907867835,34.8082834487333,64.0451684270218,41.5326730347417,56.8776798962444,12.8413476169129,11.1681022593471,74.1299160602121,70.7231055569689,32.9778664197506,34.2183201888806,13.9912375625629,118.14058092666,123.265875811559,105.67302329771,10.970584429488,9.53193131528499,11.7539905112521,34.0783860549956,29.5937972576649,35.0281498110162,35.7532456812032,35.1218109277999,27.1733489822615,22.6827116783938,15.299405235216,9.52546010189447,14.1464901144451,0,8.08784535303569,5.81821258754723,6.53341940039581,68.220655810116,46.0987853269042,57.5876118371178,105.881667845583,64.8893210710523,52.4351181273646,6.54663453473002,7.19776211658553,5.68994931701213,21.9069576417451,1.30815093828268,5.4921545683618,5.44403717407994,6.85933465964276,5.75010257459886,125.501389331187,79.7898356212479,70.243604020775,21.3525331909836,11.747871037489,21.6582278756526,0.202316460859598,0.528990979272033,0,5.76035704517525,20.4537803105562,15.7482450524245,20.7661936139065,18.4724829885986,5.09320187881288,3.07374644257244,0.414758449233911,0.405017814995072,0.420649922702764,0.856952953211411,1.10434270475807,0,0.287536413054709,0,0,1.53224805702225,1.68967186581868,0.527545150920775,0.548925861614458,1.04182674111352,1.67509799400829,1.12552522006336,1.5279824777681,0.883885756421003,0.711858403995515,0.372798891650601,9.16286939331527,14.2074533000757,72.1762576867178,30.9752595713299,6.11974200336975,34.5410042648203,64.9776417447669,57.347441548459,15.308441794361,2.55645483867087,1.81850203222008,1.06001872353102,1.83096445709685,1.28326477414318,0,0,3.46385665617943,3.80039798212648,6.0662933401774,21.009833868307,117.298861292169,14.2504453502232,3.46970653532272,5.1759131313064,5.76538743140146,16.4287678202359,10.9357497636205,12.6923257242972,27.4386414185155,20.2439099687876,13.2691582792481,5.01477234836968,10.6003928860989,13.5765070877862,31.6865994070808,1.17112318804619,0.83778682725382,48.792297544841,7.42853771936706,5.99902730993408,9.53026703047985,2.24685959107234,3.20250421973039,0.251308704225729,0.869121600961382,2.55715457330331,2.0778804455956,2.59586020908412,3.46253837091075,15.0532434438213,2.77995034277042,3.78795340595653,1.30120442962704,0.459804208866946,0.540186389416048,2.10986744970001,1.97305847538851,0.896796041993948,1.3118241438362,2.58703370739016,1.29340795759705,1.89106080167819,3.16712023495108,1.7535658594206,3.05851974148158,2.78601733217733,4.32142486456681,1.19420560091096,4.91549231119264,6.43369767786788,6.25159698670304,1.65700618028402,2.34526059981096,1.62055855314913,4.49814997611899,3.93528463494808,2.1597395804233,4.41814495025775,8.58474884478781,8.05680862333469,5.75959474697182,10.6708851651412,10.133601193232,10.2339991197733,17.124908992702,18.9231050452124,1.89260953707715,0.617427674275707,140.758401551098,89.9131926656051,1.70630600428187,3.71578674976702,4.63922860759536,11.0925938542838,20.9035361214178,29.2947464213341,34.6406214927493,42.3276313640708,48.507695298452,43.9693803210943,49.9108063024948,53.9291645192533,43.2276099749388,40.4256784706365,1.70701110857774,3.31320686568214,2.25415471346161,2.03651327845314,6.40043207653165,6.31222379012867,7.01925562079256,10.0374900626129,9.73392112616524,8.39100714668244,50.1004939777282,4.83850806576673,6.4864468387357,13.4917267430912,10.3458661908136,15.4353382241547,15.2775511068852,40.2774592431135,23.1853374288301,27.4561413188081,15.814502718009,32.7484033948283,38.0685961199764,36.8765161802783,43.2347766587808,40.0428122731595,53.2089187679821,1.89491411770485,4.07412441105065,4.41337223015489,3.75504397261603,12.8979818230198,24.9945822930314,26.7333097565184,15.1329738341943,18.1601045511995,16.9022054776936,34.5751594050207,34.3643113913132,29.0744607748838,36.1899081454253,76.1467957346193,10.8188140064188,14.0727740615414,3.53211297973142,1.52375192569864,1.96721934452011,8.83648245215305,2.2085575359138,2.73307121007647,0.430846795465598,3.58453196928828,3.34198011123591,1.13230612315533,3.23848561339915,2.92255857911312,2.76701444562566,1.60660658210904,9.65192579416227,4.98583690268315,2.44330439030364,13.5275500837479,6.63725691699814,2.6705869977048,2.41858845571801,4.14931175462976,6.20133975049623,7.68587869859819,25.0675444373175,5.08947221268508,7.48644494607915,8.84902922220285,8.4334886859999,8.25084345985495,10.8940673841212,1.08036656418786,1.81102157295856,2.35770738534752,3.01478397191865,2.85390108163313,3.1264313914403,5.17590413494819,16.8963629805871,12.0744280392378,5.07215315526412,5.60613260001032,4.35953952078945,3.61877549568935,4.29740438411291,2.1338316966858,46.0539721875164,2.41052892613663,48.698201027388,6.3979929068599,23.7048995033231,14.5043711893612,32.806614653046,35.6893950202175,19.7174978792872,23.3718925380509,19.4861963064238,8.59203556213602,0.949007980743406,3.04979200690273,3.13215488383224,4.80903080833278,10.4814030598165,9.57536859332227,13.9684340175818,8.37619014348895,37.5883422546199,8.69875038321696,0,1.04661582230785,1.32366792365678,1.55560950675238,2.19571699912143,2.70329800785245,2.58185925020659,1.95306577265925,2.72634295506848,0,1.15212002503146,29.3890342184206,4.25722952109345,6.16265742988964,7.53540773271211,12.8899220880587,17.0865965111888,12.7407176491167,14.7689527174577,14.0343365427925,14.17446603783,20.1652370273681,22.7076862123623,14.7204117709704,30.3879945672079,5.66825959038028,3.10780334723691,1.07656627931371,2.01461539636894,8.69353173144857,20.64507229963,22.8939530334081,5.78794623513478,10.0314420807073,0.564751842617067,0,0.572895513439397,0.68741272937475,0.685082519770642,0,0.675022500231806,1.35096360967266,1.35942722695261,0.51776031175182,0.518936737920883,0.798049746802062,1.87806966329548,2.91728060481953,2.30574478890781,4.41224420280034,8.44537565646138,9.06554251851134,8.98573786857083,7.83361356467772,5.83002389747551,7.9223063382152,5.71213195566283,7.10679191694049,6.71994986780675,4.76293691283074,7.18482820858104,5.01563973205633,9.47797571847605,12.0703114510206,6.17164654293748,7.45398385869217,7.39152188836695,8.43009216467505,8.37573485696442,8.12300235760094,6.0366231048015,9.73357932320019,6.65440157844723,8.41713407486608,8.06718123244384,4.43270170690036,6.54769669071503,6.8172210121825,6.36591816237767,1.99848462350357,10.5269223800434,9.23945532407683,6.31251495827183,7.94129108830256,7.41977073985349
|short_description=p1@BC006779
}}

Revision as of 23:15, 13 September 2013

Short description:p1@BC006779
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_BC006779_5end
Coexpression cluster:MCL_coexpression_mm9:1308
Association with transcript: 6bp_to_ENSMUST00000094203, ENSMUST00000155049_5end
EntrezGene:BC006779
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@BC006779

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I578.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I653.23
CD326+ enterocyte, pool1.CNhs13542.11848-124I3138.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I4143.26
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I725.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I834.81
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E964.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E741.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F256.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.84
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.17
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E474.13
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E870.72
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A132.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A334.22
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2118.14
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4123.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6105.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I911.75
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D134.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D229.59
GP2+ M cell, pool1.CNhs13228.11845-124H935.03
GP2+ M cell, pool2.CNhs13231.11846-124I135.75
GP2+ M cell, pool3.CNhs13240.11847-124I235.12
Ileum epithelium, pool1.CNhs13199.10252-104B927.17
Ileum epithelium, pool2.CNhs13232.10253-104C122.68
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I39.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.09
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G868.22
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H146.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H357.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9105.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H264.89
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H452.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.55
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.49
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.86
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2125.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I979.79
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A170.24
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.35
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C521.66
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D120.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E720.77
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D218.47
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D99.16
Mouse Schwann, donor2.CNhs12573.11746-123F914.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G372.18
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F730.98
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C834.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F464.98
Mouse hepatocyte, donor8.CNhs13091.11824-124F657.35
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B621.01
accessory axillary lymph node, adult.CNhs10475.1063-29H9117.30
adrenal gland, adult.CNhs10508.49-24D714.25
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F516.43
adrenal gland, neonate N00.CNhs11191.1311-23C110.94
adrenal gland, neonate N25.CNhs11223.1377-27I312.69
amnion, adult pregnant day17.5.CNhs10488.583-22A827.44
aorta, adult.CNhs10498.46-23H120.24
bone (os femoris), adult.CNhs10483.56-12G213.27
bone (os femoris), neonate N02.CNhs11227.1985-43F55.01
bone (os femoris), neonate N16.CNhs11225.1525-43A610.60
bone (os femoris), neonate N20.CNhs11195.1350-25C313.58
cecum, adult.CNhs10467.37-13H431.69
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H748.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.43
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.53
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.05
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.43
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G38.58
heart, neonate N00.CNhs11213.639-21E38.06
heart, neonate N03.CNhs11221.1349-25I25.76
heart, neonate N10.CNhs11118.749-24G110.67
heart, neonate N16.CNhs11209.782-15G110.13
heart, neonate N20.CNhs11127.821-26I610.23
heart, neonate N25.CNhs11196.1351-25D317.12
heart, neonate N30.CNhs11202.1390-42D218.92
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I3140.76
intestine, adult.CNhs10496.178-9A389.91
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D84.64
intestine, embryo E16.CNhs10585.463-22H411.09
intestine, embryo E17.CNhs10582.482-18D320.90
intestine, embryo E18.CNhs10526.1289-20F729.29
intestine, neonate N00.CNhs11126.644-26D134.64
intestine, neonate N01.CNhs11192.1322-23E942.33
intestine, neonate N06.CNhs11102.688-20B848.51
intestine, neonate N07.CNhs11095.720-20F243.97
intestine, neonate N10.CNhs11098.755-23A549.91
intestine, neonate N20.CNhs11187.827-18D153.93
intestine, neonate N25.CNhs11121.1352-25E343.23
intestine, neonate N30.CNhs11131.1384-42G140.43
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C76.40
kidney, neonate N00.CNhs11214.646-21G76.31
kidney, neonate N10.CNhs11206.758-6D57.02
kidney, neonate N20.CNhs11113.832-19I110.04
kidney, neonate N25.CNhs11122.1353-25F39.73
kidney, neonate N30.CNhs11203.1385-42H18.39
liver, adult pregnant day01.CNhs10466.508-5B250.10
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H66.49
liver, embryo E14.CNhs10594.409-16E113.49
liver, embryo E15.CNhs10520.433-16D710.35
liver, embryo E16.CNhs10523.462-17F515.44
liver, embryo E17.CNhs10510.481-18A315.28
liver, embryo E18.CNhs10579.499-43G440.28
liver, neonate N00.CNhs11117.641-24F423.19
liver, neonate N03.CNhs11123.1345-25G227.46
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H232.75
liver, neonate N10.CNhs11115.751-24B938.07
liver, neonate N20.CNhs11220.823-25A336.88
liver, neonate N25.CNhs11198.1368-26H143.23
liver, neonate N30.CNhs11106.1382-42D140.04
lung, adult.CNhs10474.28-22B153.21
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C54.41
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A612.90
lung, embryo E18.CNhs10583.1287-20I624.99
lung, neonate N00.CNhs11224.640-42C626.73
lung, neonate N06.CNhs11212.683-20E515.13
lung, neonate N07.CNhs11111.715-19A318.16
lung, neonate N10.CNhs11219.750-23E616.90
lung, neonate N20.CNhs11109.822-18A434.58
lung, neonate N25.CNhs11119.1359-25C734.36
lung, neonate N30.CNhs11133.1394-42H229.07
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A136.19
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A176.15
mammary gland, adult lactating day02.CNhs10480.595-22B610.82
mammary gland, adult pregnant day19.CNhs10476.588-5H214.07
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.84
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I79.65
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G613.53
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E54.15
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G925.07
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D87.49
pancreas, neonate N16.CNhs11136.787-43B68.85
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G810.89
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I716.90
placenta, adult pregnant day17.CNhs10464.577-18G312.07
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C35.61
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H33.62
skin, neonate N06.CNhs11097.693-20I54.30
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I146.05
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G248.70
spleen, embryo E16.CNhs11035.461-43C16.40
spleen, embryo E18.CNhs11011.1271-21F223.70
spleen, neonate N10.CNhs11116.752-24D114.50
spleen, neonate N20.CNhs11112.824-19H132.81
spleen, neonate N25.CNhs11099.1354-25G335.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C923.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D319.49
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D43.13
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C610.48
stomach, neonate N03.CNhs11193.1340-24B89.58
stomach, neonate N07.CNhs11210.718-18A913.97
stomach, neonate N25.CNhs11104.1355-25E48.38
stomach, neonate N30.CNhs11134.1386-42I137.59
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B529.39
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I26.16
thymus, embryo E16.CNhs11002.456-26C57.54
thymus, embryo E17.CNhs10581.478-18C112.89
thymus, embryo E18.CNhs10595.1273-19G417.09
thymus, neonate N02.CNhs11181.1541-43F812.74
thymus, neonate N03.CNhs11137.2104-43C714.77
thymus, neonate N06.CNhs11197.681-26C414.03
thymus, neonate N07.CNhs11211.713-19D314.17
thymus, neonate N10.CNhs11194.748-24E420.17
thymus, neonate N20.CNhs11186.820-7A222.71
thymus, neonate N25.CNhs11125.1362-25G714.72
thymus, neonate N30.CNhs11132.1393-42G230.39
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E48.69
uterus, adult pregnant day19.CNhs10497.590-15F520.65
uterus, adult.CNhs10509.92-27E522.89
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F810.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.45
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.43
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.82
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B310.53
whole body, neonate N00.CNhs10525.657-19C29.24
whole body, neonate N01.CNhs10576.659-23C66.31
whole body, neonate N06.CNhs10515.692-21D17.94
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic lineage restricted progenitor cell2.72e-0725

Uber anatomy
Ontology termp-valuen
endoderm-derived structure5.00e-19118
endoderm5.00e-19118
presumptive endoderm5.00e-19118
digestive system1.39e-18116
digestive tract1.39e-18116
primitive gut1.39e-18116
subdivision of digestive tract9.49e-18114
endo-epithelium2.20e-1169
unilaminar epithelium1.93e-1066
gut epithelium6.10e-1055
intestine3.18e-0931
foregut5.51e-0980
gastrointestinal system5.69e-0947
hemolymphoid system1.22e-0748
immune system1.22e-0748
organ component layer1.99e-0724
digestive tract diverticulum4.52e-0723
sac4.52e-0723
exocrine gland8.57e-0725
exocrine system8.57e-0725
liver9.92e-0722
epithelial sac9.92e-0722
digestive gland9.92e-0722
epithelium of foregut-midgut junction9.92e-0722
anatomical boundary9.92e-0722
hepatobiliary system9.92e-0722
foregut-midgut junction9.92e-0722
hepatic diverticulum9.92e-0722
liver primordium9.92e-0722
septum transversum9.92e-0722
liver bud9.92e-0722







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