FFCP PHASE1:Hg19::chr7:142373661..142373665,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:142373661..142373665,+|id=chr7:142373661..142373665,+|ontology_enrichment_celltype=CL:0000148!5.82e-08!10;CL:0000541!5.82e-08!10;CL:0002077!2.10e-07!33|ontology_enrichment_celltype_v019=CL:0000244;3.74e-19;4!CL:0000731;3.74e-19;4!CL:0000148;6.71e-17;10!CL:0000147;2.90e-12;14!CL:0002262;2.60e-10;2!CL:1000398;2.60e-10;2!CL:0000710;9.11e-09;20!CL:0002077;1.70e-08;34!CL:0002521;1.99e-07;3!CL:0002231;2.71e-07;3|ontology_enrichment_celltype_v019_2=CL:0000244,2.98e-19,4;CL:0000731,2.98e-19,4;CL:0000148,6.90e-17,10;CL:0000541,6.90e-17,10;CL:0000147,2.95e-12,14;CL:0002262,1.89e-10,2;CL:1000398,1.89e-10,2;CL:0002077,8.36e-09,34;CL:0000710,9.23e-09,20;CL:0002521,1.93e-07,3;CL:0002231,3.35e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000365;1.56e-15;5!UBERON:0005910;4.13e-13;6!UBERON:0001281;2.60e-10;2!UBERON:0003497;2.60e-10;2!UBERON:0003909;2.60e-10;2!UBERON:0003835;2.60e-10;2!UBERON:0002190;1.99e-07;3!UBERON:0001280;2.71e-07;3!UBERON:0004647;2.71e-07;3!UBERON:0000486;5.23e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.30e-15,5;UBERON:0005910,3.55e-13,6;UBERON:0001281,1.89e-10,2;UBERON:0003497,1.89e-10,2;UBERON:0003909,1.89e-10,2;UBERON:0003835,1.89e-10,2;UBERON:0002190,1.93e-07,3;UBERON:0001280,2.19e-07,3;UBERON:0004647,2.19e-07,3;UBERON:0005171,2.19e-07,3|phase1_expression=0,0,0,0,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0.329250856225877,1.1240175325762,0.201057944823262,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0.381988425558278,0,0,2.05654985406647,1.20137223137567,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01289087829486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0.661139661443912,0,0.255225424989168,0.4046311234222,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,5.05414427002877,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0,0.134802265961354,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0,0.160753148465019,0.137539436597234,0,0.449947783103001,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0.653174720218818,0,0,0,0.113312091520126,0,0,0.258565912723101,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0.211312123358627,0.19998739585493,0.106691729694141,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,0,0,0.126166424835079,0,0,0,0.26721740526556,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:142373661..142373665,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:142373661..142373665,+ | |||
|id=chr7:142373661..142373665,+ | |||
|ontology_enrichment_celltype=CL:0000148!5.82e-08!10;CL:0000541!5.82e-08!10;CL:0002077!2.10e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000244;3.74e-19;4!CL:0000731;3.74e-19;4!CL:0000148;6.71e-17;10!CL:0000147;2.90e-12;14!CL:0002262;2.60e-10;2!CL:1000398;2.60e-10;2!CL:0000710;9.11e-09;20!CL:0002077;1.70e-08;34!CL:0002521;1.99e-07;3!CL:0002231;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.98e-19,4;CL:0000731,2.98e-19,4;CL:0000148,6.90e-17,10;CL:0000541,6.90e-17,10;CL:0000147,2.95e-12,14;CL:0002262,1.89e-10,2;CL:1000398,1.89e-10,2;CL:0002077,8.36e-09,34;CL:0000710,9.23e-09,20;CL:0002521,1.93e-07,3;CL:0002231,3.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.56e-15;5!UBERON:0005910;4.13e-13;6!UBERON:0001281;2.60e-10;2!UBERON:0003497;2.60e-10;2!UBERON:0003909;2.60e-10;2!UBERON:0003835;2.60e-10;2!UBERON:0002190;1.99e-07;3!UBERON:0001280;2.71e-07;3!UBERON:0004647;2.71e-07;3!UBERON:0000486;5.23e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.30e-15,5;UBERON:0005910,3.55e-13,6;UBERON:0001281,1.89e-10,2;UBERON:0003497,1.89e-10,2;UBERON:0003909,1.89e-10,2;UBERON:0003835,1.89e-10,2;UBERON:0002190,1.93e-07,3;UBERON:0001280,2.19e-07,3;UBERON:0004647,2.19e-07,3;UBERON:0005171,2.19e-07,3 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0.329250856225877,1.1240175325762,0.201057944823262,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0.381988425558278,0,0,2.05654985406647,1.20137223137567,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01289087829486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0.661139661443912,0,0.255225424989168,0.4046311234222,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,5.05414427002877,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0,0.134802265961354,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0,0.160753148465019,0.137539436597234,0,0.449947783103001,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0.653174720218818,0,0,0,0.113312091520126,0,0,0.258565912723101,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0.211312123358627,0.19998739585493,0.106691729694141,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,0,0,0.126166424835079,0,0,0,0.26721740526556,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:142373661..142373665,+ | |||
}} |
Revision as of 23:40, 13 September 2013
Short description: | p@chr7:142373661..142373665, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:142373661..142373665, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.98e-19 | 4 |
urothelial cell | 2.98e-19 | 4 |
melanocyte | 6.90e-17 | 10 |
melanoblast | 6.90e-17 | 10 |
pigment cell | 2.95e-12 | 14 |
endothelial cell of sinusoid | 1.89e-10 | 2 |
endothelial cell of hepatic sinusoid | 1.89e-10 | 2 |
ecto-epithelial cell | 8.36e-09 | 34 |
neurecto-epithelial cell | 9.23e-09 | 20 |
subcutaneous fat cell | 1.93e-07 | 3 |
epithelial cell of prostate | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.30e-15 | 5 |
transitional epithelium | 3.55e-13 | 6 |
hepatic sinusoid | 1.89e-10 | 2 |
abdomen blood vessel | 1.89e-10 | 2 |
sinusoid | 1.89e-10 | 2 |
abdominal segment blood vessel | 1.89e-10 | 2 |
subcutaneous adipose tissue | 1.93e-07 | 3 |
liver parenchyma | 2.19e-07 | 3 |
liver lobule | 2.19e-07 | 3 |
hepatic duct | 2.19e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.