FFCP PHASE1:Mm9::chr2:58047885..58047902,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=227929|HGNC=|UniProt=|association_with_transcript=25bp_to_ENSMUST00000144117_5end|description=CAGE_peak_4_at_Cytip_5end|id=chr2:58047885..58047902,-|ontology_enrichment_celltype=CL:0002563!1.75e-07!9;CL:0002251!1.75e-07!9|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.39e-17!43;UBERON:0005409!4.57e-15!59;UBERON:0001007!2.07e-10!128;UBERON:0001555!2.07e-10!128;UBERON:0007026!2.07e-10!128;UBERON:0004119!5.61e-10!130;UBERON:0000925!5.61e-10!130;UBERON:0006595!5.61e-10!130;UBERON:0000344!1.05e-09!15;UBERON:0004921!2.01e-09!126;UBERON:0004185!2.01e-09!126;UBERON:0005153!4.34e-09!17;UBERON:0005157!9.26e-09!27;UBERON:0005178!1.78e-08!17;UBERON:0005181!1.78e-08!17;UBERON:0002224!1.78e-08!17;UBERON:0000915!1.78e-08!17;UBERON:0008947!1.78e-08!17;UBERON:0003258!1.78e-08!17;UBERON:0001242!3.34e-08!13;UBERON:0000060!3.34e-08!13;UBERON:0001262!3.34e-08!13;UBERON:0004786!3.34e-08!13;UBERON:0005177!5.31e-08!85;UBERON:0001045!1.18e-07!13;UBERON:0002108!1.37e-07!16;UBERON:0003350!1.75e-07!9;UBERON:0004808!1.75e-07!9;UBERON:0001277!1.75e-07!9;UBERON:0000464!8.24e-07!57;UBERON:0002048!8.30e-07!14;UBERON:0000117!8.30e-07!14;UBERON:0000171!8.30e-07!14;UBERON:0000170!8.30e-07!14;UBERON:0005597!8.30e-07!14;UBERON:0000118!8.30e-07!14;UBERON:0001264!9.36e-07!12;UBERON:0003922!9.36e-07!12;UBERON:0002114!9.36e-07!12;UBERON:0003923!9.36e-07!12;UBERON:0003924!9.36e-07!12;UBERON:0003921!9.36e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0005153,6.04e-12,17;UBERON:0005177,7.16e-11,79;UBERON:0005157,7.71e-10,20;UBERON:0005178,3.65e-09,17;UBERON:0005181,3.65e-09,17;UBERON:0002224,3.65e-09,17;UBERON:0000915,3.65e-09,17;UBERON:0008947,3.65e-09,17;UBERON:0003258,3.65e-09,17;UBERON:0002048,3.83e-09,14;UBERON:0000117,3.83e-09,14;UBERON:0000171,3.83e-09,14;UBERON:0000170,3.83e-09,14;UBERON:0005597,3.83e-09,14;UBERON:0000118,3.83e-09,14;UBERON:0002100,7.35e-09,90;UBERON:0001264,2.72e-08,12|phase1_expression=0,1.74487703819681,2.27499619694768,1.81478526784098,3.00537437967808,0.839396359559449,0.700837921786577,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,2.55987876469451,0.91763712426868,1.14846392823004,0,0.430942465371778,0.950117097281869,0,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,1.51657333504435,0.91347103775248,0,1.63286352971307,0,0,0.230615497256059,0.452167921657868,0.823120949949934,1.38233250462643,0,0,0,0,0,0,5.59175283654366,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0.991256348951394,0.264450566663544,0,0,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,0.898819408654221,1.51296634912286,0.995706366271836,0,0.114248512609729,0,0.203651327845314,1.16371492300575,1.1221731182451,4.23684798732524,6.34723636312289,8.47793130343424,8.14421281883883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.09685527549795,0,0,0.169745085775188,0,0.167506257441816,0.952174563544055,1.36593553500459,1.7339865851681,2.87904096543407,1.11618338060241,3.76885623846197,3.28101465545202,4.48412081602686,0,0,15.7364567366092,15.7283945393698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.989820737835213,11.9470624505967,0,0.302323556964751,0.188605079755898,0,0.307435147943927,1.03371317267288,1.45413491791002,1.06949213515416,1.58018378967908,8.4334886859999,7.21948802737308,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,1.07891477107857,0.661227645802687,5.23511883968059,4.14767914533737,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p4@Cytip}} | ||
|EntrezGene=227929 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENSMUST00000144117_5end | |||
|description=CAGE_peak_4_at_Cytip_5end | |||
|id=chr2:58047885..58047902,- | |||
|ontology_enrichment_celltype=CL:0002563!1.75e-07!9;CL:0002251!1.75e-07!9 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.39e-17!43;UBERON:0005409!4.57e-15!59;UBERON:0001007!2.07e-10!128;UBERON:0001555!2.07e-10!128;UBERON:0007026!2.07e-10!128;UBERON:0004119!5.61e-10!130;UBERON:0000925!5.61e-10!130;UBERON:0006595!5.61e-10!130;UBERON:0000344!1.05e-09!15;UBERON:0004921!2.01e-09!126;UBERON:0004185!2.01e-09!126;UBERON:0005153!4.34e-09!17;UBERON:0005157!9.26e-09!27;UBERON:0005178!1.78e-08!17;UBERON:0005181!1.78e-08!17;UBERON:0002224!1.78e-08!17;UBERON:0000915!1.78e-08!17;UBERON:0008947!1.78e-08!17;UBERON:0003258!1.78e-08!17;UBERON:0001242!3.34e-08!13;UBERON:0000060!3.34e-08!13;UBERON:0001262!3.34e-08!13;UBERON:0004786!3.34e-08!13;UBERON:0005177!5.31e-08!85;UBERON:0001045!1.18e-07!13;UBERON:0002108!1.37e-07!16;UBERON:0003350!1.75e-07!9;UBERON:0004808!1.75e-07!9;UBERON:0001277!1.75e-07!9;UBERON:0000464!8.24e-07!57;UBERON:0002048!8.30e-07!14;UBERON:0000117!8.30e-07!14;UBERON:0000171!8.30e-07!14;UBERON:0000170!8.30e-07!14;UBERON:0005597!8.30e-07!14;UBERON:0000118!8.30e-07!14;UBERON:0001264!9.36e-07!12;UBERON:0003922!9.36e-07!12;UBERON:0002114!9.36e-07!12;UBERON:0003923!9.36e-07!12;UBERON:0003924!9.36e-07!12;UBERON:0003921!9.36e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,6.04e-12,17;UBERON:0005177,7.16e-11,79;UBERON:0005157,7.71e-10,20;UBERON:0005178,3.65e-09,17;UBERON:0005181,3.65e-09,17;UBERON:0002224,3.65e-09,17;UBERON:0000915,3.65e-09,17;UBERON:0008947,3.65e-09,17;UBERON:0003258,3.65e-09,17;UBERON:0002048,3.83e-09,14;UBERON:0000117,3.83e-09,14;UBERON:0000171,3.83e-09,14;UBERON:0000170,3.83e-09,14;UBERON:0005597,3.83e-09,14;UBERON:0000118,3.83e-09,14;UBERON:0002100,7.35e-09,90;UBERON:0001264,2.72e-08,12 | |||
|phase1_expression=0,1.74487703819681,2.27499619694768,1.81478526784098,3.00537437967808,0.839396359559449,0.700837921786577,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,2.55987876469451,0.91763712426868,1.14846392823004,0,0.430942465371778,0.950117097281869,0,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,1.51657333504435,0.91347103775248,0,1.63286352971307,0,0,0.230615497256059,0.452167921657868,0.823120949949934,1.38233250462643,0,0,0,0,0,0,5.59175283654366,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0.991256348951394,0.264450566663544,0,0,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,0.898819408654221,1.51296634912286,0.995706366271836,0,0.114248512609729,0,0.203651327845314,1.16371492300575,1.1221731182451,4.23684798732524,6.34723636312289,8.47793130343424,8.14421281883883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.09685527549795,0,0,0.169745085775188,0,0.167506257441816,0.952174563544055,1.36593553500459,1.7339865851681,2.87904096543407,1.11618338060241,3.76885623846197,3.28101465545202,4.48412081602686,0,0,15.7364567366092,15.7283945393698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.989820737835213,11.9470624505967,0,0.302323556964751,0.188605079755898,0,0.307435147943927,1.03371317267288,1.45413491791002,1.06949213515416,1.58018378967908,8.4334886859999,7.21948802737308,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,1.07891477107857,0.661227645802687,5.23511883968059,4.14767914533737,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Cytip | |||
}} |
Revision as of 00:11, 14 September 2013
Short description: | p4@Cytip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cytip_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENSMUST00000144117_5end |
EntrezGene: | Cytip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial bud | 6.04e-12 | 17 |
trunk region element | 7.16e-11 | 79 |
epithelial fold | 7.71e-10 | 20 |
thoracic cavity element | 3.65e-09 | 17 |
thoracic segment organ | 3.65e-09 | 17 |
thoracic cavity | 3.65e-09 | 17 |
thoracic segment of trunk | 3.65e-09 | 17 |
respiratory primordium | 3.65e-09 | 17 |
endoderm of foregut | 3.65e-09 | 17 |
lung | 3.83e-09 | 14 |
respiratory tube | 3.83e-09 | 14 |
respiration organ | 3.83e-09 | 14 |
pair of lungs | 3.83e-09 | 14 |
lung primordium | 3.83e-09 | 14 |
lung bud | 3.83e-09 | 14 |
trunk | 7.35e-09 | 90 |
pancreas | 2.72e-08 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.