Personal tools

FFCP PHASE1:Mm9::chr2:70313168..70313184,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=64406|HGNC=|UniProt=Q9JHX2|association_with_transcript=188bp_to_ENSMUST00000100043,NM_022435,uc008jzg.1_5end|description=CAGE_peak_1_at_Sp5_5end|id=chr2:70313168..70313184,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,2.07e-08,9;CL:0002251,2.07e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!1.58e-07!14;UBERON:0000117!1.58e-07!14;UBERON:0000171!1.58e-07!14;UBERON:0000170!1.58e-07!14;UBERON:0005597!1.58e-07!14;UBERON:0000118!1.58e-07!14;UBERON:0000485!2.53e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.43e-09,14;UBERON:0000117,1.43e-09,14;UBERON:0000171,1.43e-09,14;UBERON:0000170,1.43e-09,14;UBERON:0005597,1.43e-09,14;UBERON:0000118,1.43e-09,14;UBERON:0000485,2.69e-09,11;UBERON:0005153,1.52e-08,17;UBERON:0003350,2.07e-08,9;UBERON:0004808,2.07e-08,9;UBERON:0001277,2.07e-08,9;UBERON:0001242,1.32e-07,13;UBERON:0001262,1.32e-07,13;UBERON:0004786,1.32e-07,13;UBERON:0005178,4.95e-07,17;UBERON:0005181,4.95e-07,17;UBERON:0002224,4.95e-07,17;UBERON:0000915,4.95e-07,17;UBERON:0008947,4.95e-07,17;UBERON:0003258,4.95e-07,17;UBERON:0000160,4.99e-07,31;UBERON:0000344,7.15e-07,15|phase1_expression=10.5698239089164,3.48975407639361,2.72999543633722,10.8887116070459,15.0268718983904,2.68606835059024,3.97141489012394,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,1.11994695955385,0.45881856213434,0,1.29228598847722,1.07735616342945,0.570070258369122,2.26827116783938,0.221730510655305,0,0,0,10.6875099307972,11.3039558843775,14.2918549383658,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,2.19686182734472,1.94429899074283,3.91961980551015,1.43752564364972,0,0,0,0,0,0,28.9312539029225,24.3335850465135,23.4517619297286,1.69422266034566,0,0,0.988866362566974,0,3.89480143673926,4.2264013585371,0.622137673850866,1.35005938331691,0.210324961351382,0,1.98781686856452,0.122490799214954,0.575072826109418,0.919218786610021,0,0.127687338085188,0.153606533256243,3.42904348098504,4.29991924931325,2.08365348222704,0.279182999001381,0.56276261003168,0.45839474333043,2.35702868378934,0.711858403995515,2.05039390407831,0,0,1.15945795480671,0,1.3599426674155,0.539703191637817,0,0,0.561777680527007,0,0.259786004602869,0,1.26759077799012,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.45673551887624,0,0.742210695324124,1.04091196059682,0,0.691846491768175,0.452167921657868,1.05829836422134,0.879666139307728,0,0.144599356919912,0,0,0,0,0,1.17112318804619,2.09446706813455,4.34276993854605,0,0,0,1.64769703345305,0.915001205637253,0.628271760564322,0.173824320192276,0.511430914660661,0.20778804455956,0.162241263067758,16.8034950353022,0.995255764880744,0.758168275301024,0.210441855886474,0.520481771850815,0.689706313300419,0.540186389416048,0.90422890701429,0.680364991513279,0.12811372028485,0.187403449119458,0.258703370739016,1.94011193639558,0.945530400839096,2.81521798662318,5.69908904311695,3.33656699070717,1.74126083261083,1.85203922767149,9.95171334092466,0,0,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0.329119699826961,0,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,5.24813523134351,12.8863325363681,1.85115396664481,1.91959425481711,0.464473343720877,0.257734922644187,0.201683524623343,0,0,10.9141684155238,0.658795818896044,0.754005626400808,0.994782360205754,1.16978452271472,8.08937467788799,2.59365659849633,7.36822711041159,2.27601481143698,1.37098215131675,0,1.22190796707189,0.581857461502877,0.841629838683823,1.07502113111237,0.885660887877613,0.941992367048249,0.987177311374404,2.66807364378434,0,0.393117990226406,0.449724224769707,0,0.241177159752417,0,0.863088412352432,0,0.274561413188081,0,0.372140947668503,1.87222603868736,3.03094653536534,0.717589654087649,1.4473305640901,1.47802552133284,5.68474235311454,4.56301934037672,4.75286240170527,3.05097322775053,6.365237782789,6.66522194480839,3.31727201358258,2.99506773801763,3.98636441367795,3.02964060449226,1.3109065177259,1.72684981865896,2.16973587872267,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,1.56134093729095,5.52003371368491,3.4206261464251,2.3095817216155,0,0.242780636154981,0.906970670894253,0,0,0.307435147943927,0,0.727067458955011,0.712994756769443,0,0,0,0,0.540183282093931,1.94038025674132,3.42939256050548,1.41872186913819,0.356737635204141,1.15184314421485,1.2178597964584,0.23467170806371,0,8.38007912608855,0.8244312647074,2.42196640043858,1.74907482291652,0.477489376012546,0.820704498725306,6.12109756922687,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0.138199973804424,0.954670618015114,2.68885594543965,1.01659733563424,1.29606408986162,0.627264888043406,0.87345025498471,1.34864346384821,1.32245529160537,0.785267825952089,0.259229946583586,0,0,2.8408143748356,3.97100377097034,0.777804753376191,0.258319646955462,0.337912250981556,1.64300134104056,3.9061315453185,0.838874755405687,0,0,0,1.41907650703115,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0.386379188064381,0,2.56412273974171,0,2.50786052017682,1.12950368523413,0.460325236507177,0,1.03111909406213,0,0.755393897389701,0,0,0,0.51776031175182,1.97195960409936,3.99024873401031,2.56100408631201,1.45864030240976,1.67690530102386,1.83843508450014,1.11123363900808,1.64828045791115,0.962757628775446,0,1.52087579934144,0.943131706930381,2.06011316433741,1.98477972455095,1.20614484806788,2.85776214769844,1.27472758539341,0.964546102318525,1.23625770240992,1.03039244094078,0.685738504770831,0.532427418478012,0.715308569841963,1.30811774969096,0.941093804153306,0.930760686808441,0.73171189149109,2.89376682581627,0.950628796921032,0.561142271657738,1.77952527186261,1.18205378850676,1.63692417267876,1.39443157067369,0.385813221962283,3.74715866906919,1.16965804222704,1.71896843238639,0,0,0|short_description=p1@Sp5}}
|EntrezGene=64406
|HGNC=
|UniProt=Q9JHX2
|association_with_transcript=188bp_to_ENSMUST00000100043,NM_022435,uc008jzg.1_5end
|description=CAGE_peak_1_at_Sp5_5end
|id=chr2:70313168..70313184,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,2.07e-08,9;CL:0002251,2.07e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002048!1.58e-07!14;UBERON:0000117!1.58e-07!14;UBERON:0000171!1.58e-07!14;UBERON:0000170!1.58e-07!14;UBERON:0005597!1.58e-07!14;UBERON:0000118!1.58e-07!14;UBERON:0000485!2.53e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.43e-09,14;UBERON:0000117,1.43e-09,14;UBERON:0000171,1.43e-09,14;UBERON:0000170,1.43e-09,14;UBERON:0005597,1.43e-09,14;UBERON:0000118,1.43e-09,14;UBERON:0000485,2.69e-09,11;UBERON:0005153,1.52e-08,17;UBERON:0003350,2.07e-08,9;UBERON:0004808,2.07e-08,9;UBERON:0001277,2.07e-08,9;UBERON:0001242,1.32e-07,13;UBERON:0001262,1.32e-07,13;UBERON:0004786,1.32e-07,13;UBERON:0005178,4.95e-07,17;UBERON:0005181,4.95e-07,17;UBERON:0002224,4.95e-07,17;UBERON:0000915,4.95e-07,17;UBERON:0008947,4.95e-07,17;UBERON:0003258,4.95e-07,17;UBERON:0000160,4.99e-07,31;UBERON:0000344,7.15e-07,15
|phase1_expression=10.5698239089164,3.48975407639361,2.72999543633722,10.8887116070459,15.0268718983904,2.68606835059024,3.97141489012394,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,1.11994695955385,0.45881856213434,0,1.29228598847722,1.07735616342945,0.570070258369122,2.26827116783938,0.221730510655305,0,0,0,10.6875099307972,11.3039558843775,14.2918549383658,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,2.19686182734472,1.94429899074283,3.91961980551015,1.43752564364972,0,0,0,0,0,0,28.9312539029225,24.3335850465135,23.4517619297286,1.69422266034566,0,0,0.988866362566974,0,3.89480143673926,4.2264013585371,0.622137673850866,1.35005938331691,0.210324961351382,0,1.98781686856452,0.122490799214954,0.575072826109418,0.919218786610021,0,0.127687338085188,0.153606533256243,3.42904348098504,4.29991924931325,2.08365348222704,0.279182999001381,0.56276261003168,0.45839474333043,2.35702868378934,0.711858403995515,2.05039390407831,0,0,1.15945795480671,0,1.3599426674155,0.539703191637817,0,0,0.561777680527007,0,0.259786004602869,0,1.26759077799012,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.45673551887624,0,0.742210695324124,1.04091196059682,0,0.691846491768175,0.452167921657868,1.05829836422134,0.879666139307728,0,0.144599356919912,0,0,0,0,0,1.17112318804619,2.09446706813455,4.34276993854605,0,0,0,1.64769703345305,0.915001205637253,0.628271760564322,0.173824320192276,0.511430914660661,0.20778804455956,0.162241263067758,16.8034950353022,0.995255764880744,0.758168275301024,0.210441855886474,0.520481771850815,0.689706313300419,0.540186389416048,0.90422890701429,0.680364991513279,0.12811372028485,0.187403449119458,0.258703370739016,1.94011193639558,0.945530400839096,2.81521798662318,5.69908904311695,3.33656699070717,1.74126083261083,1.85203922767149,9.95171334092466,0,0,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0.329119699826961,0,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,5.24813523134351,12.8863325363681,1.85115396664481,1.91959425481711,0.464473343720877,0.257734922644187,0.201683524623343,0,0,10.9141684155238,0.658795818896044,0.754005626400808,0.994782360205754,1.16978452271472,8.08937467788799,2.59365659849633,7.36822711041159,2.27601481143698,1.37098215131675,0,1.22190796707189,0.581857461502877,0.841629838683823,1.07502113111237,0.885660887877613,0.941992367048249,0.987177311374404,2.66807364378434,0,0.393117990226406,0.449724224769707,0,0.241177159752417,0,0.863088412352432,0,0.274561413188081,0,0.372140947668503,1.87222603868736,3.03094653536534,0.717589654087649,1.4473305640901,1.47802552133284,5.68474235311454,4.56301934037672,4.75286240170527,3.05097322775053,6.365237782789,6.66522194480839,3.31727201358258,2.99506773801763,3.98636441367795,3.02964060449226,1.3109065177259,1.72684981865896,2.16973587872267,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,1.56134093729095,5.52003371368491,3.4206261464251,2.3095817216155,0,0.242780636154981,0.906970670894253,0,0,0.307435147943927,0,0.727067458955011,0.712994756769443,0,0,0,0,0.540183282093931,1.94038025674132,3.42939256050548,1.41872186913819,0.356737635204141,1.15184314421485,1.2178597964584,0.23467170806371,0,8.38007912608855,0.8244312647074,2.42196640043858,1.74907482291652,0.477489376012546,0.820704498725306,6.12109756922687,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0.138199973804424,0.954670618015114,2.68885594543965,1.01659733563424,1.29606408986162,0.627264888043406,0.87345025498471,1.34864346384821,1.32245529160537,0.785267825952089,0.259229946583586,0,0,2.8408143748356,3.97100377097034,0.777804753376191,0.258319646955462,0.337912250981556,1.64300134104056,3.9061315453185,0.838874755405687,0,0,0,1.41907650703115,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0.386379188064381,0,2.56412273974171,0,2.50786052017682,1.12950368523413,0.460325236507177,0,1.03111909406213,0,0.755393897389701,0,0,0,0.51776031175182,1.97195960409936,3.99024873401031,2.56100408631201,1.45864030240976,1.67690530102386,1.83843508450014,1.11123363900808,1.64828045791115,0.962757628775446,0,1.52087579934144,0.943131706930381,2.06011316433741,1.98477972455095,1.20614484806788,2.85776214769844,1.27472758539341,0.964546102318525,1.23625770240992,1.03039244094078,0.685738504770831,0.532427418478012,0.715308569841963,1.30811774969096,0.941093804153306,0.930760686808441,0.73171189149109,2.89376682581627,0.950628796921032,0.561142271657738,1.77952527186261,1.18205378850676,1.63692417267876,1.39443157067369,0.385813221962283,3.74715866906919,1.16965804222704,1.71896843238639,0,0,0
|short_description=p1@Sp5
}}

Revision as of 00:24, 14 September 2013

Short description:p1@Sp5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sp5_5end
Coexpression cluster:NA
Association with transcript: 188bp_to_ENSMUST00000100043, NM_022435, uc008jzg.1_5end
EntrezGene:Sp5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sp5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.89
CD326+ enterocyte, pool2.CNhs13197.11849-124I415.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.69
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C328.93
Mouse Granule cells, donor2.CNhs12357.11731-123E324.33
Mouse Granule cells, donor3.CNhs12108.11636-122C723.45
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.80
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A85.70
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I69.95
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G15.25
intestinal mucosa, adult.CNhs10506.860-29I312.89
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G17.37
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G25.68
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C54.75
lung, embryo E16.CNhs10998.458-17B63.05
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I66.67
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F88.38
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I43.91
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell2.07e-089
epithelial cell of alimentary canal2.07e-089







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:70313168..70313184,%2B&oldid=2989414"