FFCP PHASE1:Hg19::chr7:27179852..27179863,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3200|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5104|TSSclassifier=S|UniProt=|association_with_transcript=-8bp_to_ENST00000521401_5end|description=CAGE_peak_10_at_HOXA3_5end|id=chr7:27179852..27179863,-|ontology_enrichment_celltype=CL:0002582!2.48e-07!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:6193;1.92e-15;1!DOID:1909;1.20e-08;2!DOID:3350;2.23e-08;2!DOID:4468;2.23e-08;2|ontology_enrichment_disease_v019_2=DOID:6193,1.34e-15,1;DOID:1909,1.20e-08,2;DOID:4468,1.61e-08,2;DOID:3350,1.86e-08,2|ontology_enrichment_uberon=UBERON:0000489!4.75e-11!32;UBERON:0006554!1.13e-10!44;UBERON:0001008!2.41e-10!45;UBERON:0002113!5.90e-10!27;UBERON:0003918!5.90e-10!27;UBERON:0005095!5.90e-10!27;UBERON:0007687!5.90e-10!27;UBERON:0000059!2.57e-09!11;UBERON:0003887!6.33e-09!21;UBERON:0000080!7.28e-09!18;UBERON:0002120!7.28e-09!18;UBERON:0004875!7.28e-09!18;UBERON:0005721!7.28e-09!18;UBERON:0005754!7.28e-09!18;UBERON:0007297!7.28e-09!18;UBERON:0004907!4.64e-08!5;UBERON:0006947!4.83e-08!3;UBERON:0004054!4.83e-08!3;UBERON:0005177!7.07e-08!107;UBERON:0004876!8.45e-08!20;UBERON:0005409!9.08e-08!35;UBERON:0000160!1.04e-07!27;UBERON:0006555!1.69e-07!17;UBERON:0005103!1.69e-07!17;UBERON:0000083!1.69e-07!17;UBERON:0009201!1.69e-07!17;UBERON:0004819!1.69e-07!17;UBERON:0006553!1.69e-07!17;UBERON:0003074!1.69e-07!17;UBERON:0003060!1.69e-07!17;UBERON:0000058!4.88e-07!26|ontology_enrichment_uberon_v019=UBERON:0001052;2.96e-15;4!UBERON:0000160;6.54e-13;17!UBERON:0004907;2.12e-12;5!UBERON:0002108;2.99e-12;4!UBERON:0005409;3.64e-10;22|ontology_enrichment_uberon_v019_2=UBERON:0001052,2.39e-15,4;UBERON:0000160,5.96e-13,17;UBERON:0004907,1.79e-12,5;UBERON:0002108,2.99e-12,4;UBERON:0005409,4.77e-09,25|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0.763976851116555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0.232420756919918,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0.784349769176855,0,0.633309773357254,0,0,0.647747748306418,0,0.541892875087706,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0.54941678891006,0.41254749960294,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95879369790977,0,0.216388639742091,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0.901940516486955,2.38482840213668,0,0,0,0,0,0,0,0,0,0.698906672968121,1.54787429224455,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0.458146384663663,0,0,0,0.942776138467182,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82479747637269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0.383830394638891,0,0,0,0,0,0,0,0,1.02232813071253,0.453248366080503,0,0,0,0,0,0,0,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73410499462404,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,2.24217730651031,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01651473835064,0,0,0.231522474323834,1.31135736302374,0.940634592723046,0,0,0,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.631086248772738,0,0,1.0580536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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5104 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_ENST00000521401_5end | |||
|description=CAGE_peak_10_at_HOXA3_5end | |||
|id=chr7:27179852..27179863,- | |||
|ontology_enrichment_celltype=CL:0002582!2.48e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;1.92e-15;1!DOID:1909;1.20e-08;2!DOID:3350;2.23e-08;2!DOID:4468;2.23e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.34e-15,1;DOID:1909,1.20e-08,2;DOID:4468,1.61e-08,2;DOID:3350,1.86e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000489!4.75e-11!32;UBERON:0006554!1.13e-10!44;UBERON:0001008!2.41e-10!45;UBERON:0002113!5.90e-10!27;UBERON:0003918!5.90e-10!27;UBERON:0005095!5.90e-10!27;UBERON:0007687!5.90e-10!27;UBERON:0000059!2.57e-09!11;UBERON:0003887!6.33e-09!21;UBERON:0000080!7.28e-09!18;UBERON:0002120!7.28e-09!18;UBERON:0004875!7.28e-09!18;UBERON:0005721!7.28e-09!18;UBERON:0005754!7.28e-09!18;UBERON:0007297!7.28e-09!18;UBERON:0004907!4.64e-08!5;UBERON:0006947!4.83e-08!3;UBERON:0004054!4.83e-08!3;UBERON:0005177!7.07e-08!107;UBERON:0004876!8.45e-08!20;UBERON:0005409!9.08e-08!35;UBERON:0000160!1.04e-07!27;UBERON:0006555!1.69e-07!17;UBERON:0005103!1.69e-07!17;UBERON:0000083!1.69e-07!17;UBERON:0009201!1.69e-07!17;UBERON:0004819!1.69e-07!17;UBERON:0006553!1.69e-07!17;UBERON:0003074!1.69e-07!17;UBERON:0003060!1.69e-07!17;UBERON:0000058!4.88e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;2.96e-15;4!UBERON:0000160;6.54e-13;17!UBERON:0004907;2.12e-12;5!UBERON:0002108;2.99e-12;4!UBERON:0005409;3.64e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,2.39e-15,4;UBERON:0000160,5.96e-13,17;UBERON:0004907,1.79e-12,5;UBERON:0002108,2.99e-12,4;UBERON:0005409,4.77e-09,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0.763976851116555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0.232420756919918,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0.784349769176855,0,0.633309773357254,0,0,0.647747748306418,0,0.541892875087706,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0.54941678891006,0.41254749960294,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95879369790977,0,0.216388639742091,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0.901940516486955,2.38482840213668,0,0,0,0,0,0,0,0,0,0.698906672968121,1.54787429224455,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0.458146384663663,0,0,0,0.942776138467182,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82479747637269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0.383830394638891,0,0,0,0,0,0,0,0,1.02232813071253,0.453248366080503,0,0,0,0,0,0,0,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73410499462404,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,2.24217730651031,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01651473835064,0,0,0.231522474323834,1.31135736302374,0.940634592723046,0,0,0,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.631086248772738,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p10@HOXA3 | |||
}} |
Revision as of 00:44, 14 September 2013
Short description: | p10@HOXA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_HOXA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000521401_5end |
EntrezGene: | HOXA3 |
HGNC: | 5104 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
rectum | 2.39e-15 | 4 |
intestine | 5.96e-13 | 17 |
lower digestive tract | 1.79e-12 | 5 |
small intestine | 2.99e-12 | 4 |
gastrointestinal system | 4.77e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.34e-15 | 1 |
melanoma | 1.20e-08 | 2 |
clear cell adenocarcinoma | 1.61e-08 | 2 |
mesenchymal cell neoplasm | 1.86e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.