FFCP PHASE1:Hg19::chr7:29924116..29924128,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=644150|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=22004|TSSclassifier=N|UniProt=|association_with_transcript=344bp_to_AK094250_5end|description=CAGE_peak_14_at_WIPF3_5end|id=chr7:29924116..29924128,+|ontology_enrichment_celltype=CL:0000047!9.48e-16!8;CL:0000540!1.30e-15!6;CL:0000031!1.30e-15!6;CL:0000404!1.30e-15!6;CL:0002322!2.87e-14!5;CL:0002319!2.28e-11!25;CL:0002605!9.83e-08!3;CL:0000133!4.90e-07!59;CL:0000242!8.49e-07!2|ontology_enrichment_celltype_v019=CL:0002322;1.01e-42;5!CL:0000123;2.38e-27;2!CL:0000242;2.38e-27;2!CL:0002321;1.66e-14;15!CL:0000312;1.50e-11;5!CL:0000240;8.85e-10;6!CL:0000311;8.85e-10;6!CL:0000079;8.85e-10;6!CL:0000237;8.85e-10;6!CL:0002319;3.61e-08;25!CL:0000047;6.14e-08;2!CL:0000362;8.33e-07;9|ontology_enrichment_celltype_v019_2=CL:0002322,3.64e-43,5;CL:0000242,2.39e-27,2;CL:0000312,1.50e-11,5;CL:0000240,8.86e-10,6;CL:0000311,8.86e-10,6;CL:0000079,8.86e-10,6;CL:0000237,8.86e-10,6;CL:0000036,8.86e-10,6;CL:0000357,8.86e-10,6;CL:0000114,8.86e-10,6;CL:0002319,3.58e-08,25;CL:0000047,1.15e-07,8;CL:0000133,1.43e-07,59;CL:0000362,8.34e-07,9|ontology_enrichment_development_v019=CL:0000357;8.85e-10;6!CL:0000114;8.85e-10;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.96e-53!82;UBERON:0002780!5.17e-50!41;UBERON:0001890!5.17e-50!41;UBERON:0006240!5.17e-50!41;UBERON:0005743!6.86e-50!86;UBERON:0003080!1.23e-48!42;UBERON:0001049!4.09e-47!57;UBERON:0005068!4.09e-47!57;UBERON:0006241!4.09e-47!57;UBERON:0007135!4.09e-47!57;UBERON:0002616!3.40e-45!59;UBERON:0000073!4.63e-44!94;UBERON:0001016!4.63e-44!94;UBERON:0001893!5.08e-42!34;UBERON:0002020!8.00e-42!34;UBERON:0003528!8.00e-42!34;UBERON:0001869!1.12e-41!32;UBERON:0000955!1.16e-41!69;UBERON:0006238!1.16e-41!69;UBERON:0002791!8.65e-40!33;UBERON:0003056!4.26e-33!61;UBERON:0003075!1.22e-31!86;UBERON:0007284!1.22e-31!86;UBERON:0000956!1.74e-30!25;UBERON:0000203!1.74e-30!25;UBERON:0002346!8.83e-30!90;UBERON:0007023!5.26e-29!115;UBERON:0004121!2.59e-28!169;UBERON:0000924!2.38e-27!173;UBERON:0006601!2.38e-27!173;UBERON:0000033!5.18e-26!123;UBERON:0000153!1.28e-25!129;UBERON:0007811!1.28e-25!129;UBERON:0002619!8.46e-25!22;UBERON:0001950!3.37e-24!20;UBERON:0000200!2.34e-15!6;UBERON:0002021!5.51e-13!5;UBERON:0002308!1.22e-12!9;UBERON:0000125!1.22e-12!9;UBERON:0004111!2.06e-11!241;UBERON:0003296!3.95e-11!4;UBERON:0010133!3.95e-11!4;UBERON:0000025!7.72e-11!194;UBERON:0000369!2.33e-10!4;UBERON:0002435!2.33e-10!4;UBERON:0000204!2.33e-10!4;UBERON:0010082!2.33e-10!4;UBERON:0000477!1.22e-09!286;UBERON:0001894!3.18e-09!7;UBERON:0006222!3.18e-09!7;UBERON:0009663!6.27e-09!7;UBERON:0000475!1.17e-08!365;UBERON:0000483!1.21e-08!309;UBERON:0002771!1.82e-08!3;UBERON:0000922!1.83e-08!612;UBERON:0000119!1.90e-08!312;UBERON:0000064!2.96e-08!219;UBERON:0005383!3.17e-08!3;UBERON:0005382!3.17e-08!3;UBERON:0001871!5.37e-08!7;UBERON:0000988!6.67e-08!3;UBERON:0002420!7.45e-07!9;UBERON:0007245!7.45e-07!9;UBERON:0010009!7.45e-07!9;UBERON:0010011!7.45e-07!9;UBERON:0000454!7.45e-07!9;UBERON:0000481!8.49e-07!347|ontology_enrichment_uberon_v019=UBERON:0003296;3.37e-14;4!UBERON:0010133;3.37e-14;4!UBERON:0001894;1.65e-08;7!UBERON:0002771;6.14e-08;2!UBERON:0001905;6.14e-08;2!UBERON:0000007;6.14e-08;2!UBERON:0002757;6.14e-08;2!UBERON:0010134;6.14e-08;2!UBERON:0005408;6.14e-08;2!UBERON:0001899;6.14e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0003296,5.37e-14,4;UBERON:0010133,5.37e-14,4;UBERON:0001894,2.15e-08,7;UBERON:0006222,2.15e-08,7;UBERON:0000007,6.58e-08,2;UBERON:0002771,8.04e-08,2;UBERON:0001905,9.19e-08,2;UBERON:0002757,9.19e-08,2;UBERON:0010134,9.19e-08,2;UBERON:0005408,9.19e-08,2;UBERON:0001899,9.19e-08,2;UBERON:0001017,3.06e-07,81|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,2.43947412259191,1.59035721985782,1.74290914304278,0.414644220061482,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,2.31986643833309,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=644150 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=22004 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=344bp_to_AK094250_5end | |||
|description=CAGE_peak_14_at_WIPF3_5end | |||
|id=chr7:29924116..29924128,+ | |||
|ontology_enrichment_celltype=CL:0000047!9.48e-16!8;CL:0000540!1.30e-15!6;CL:0000031!1.30e-15!6;CL:0000404!1.30e-15!6;CL:0002322!2.87e-14!5;CL:0002319!2.28e-11!25;CL:0002605!9.83e-08!3;CL:0000133!4.90e-07!59;CL:0000242!8.49e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.01e-42;5!CL:0000123;2.38e-27;2!CL:0000242;2.38e-27;2!CL:0002321;1.66e-14;15!CL:0000312;1.50e-11;5!CL:0000240;8.85e-10;6!CL:0000311;8.85e-10;6!CL:0000079;8.85e-10;6!CL:0000237;8.85e-10;6!CL:0002319;3.61e-08;25!CL:0000047;6.14e-08;2!CL:0000362;8.33e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.64e-43,5;CL:0000242,2.39e-27,2;CL:0000312,1.50e-11,5;CL:0000240,8.86e-10,6;CL:0000311,8.86e-10,6;CL:0000079,8.86e-10,6;CL:0000237,8.86e-10,6;CL:0000036,8.86e-10,6;CL:0000357,8.86e-10,6;CL:0000114,8.86e-10,6;CL:0002319,3.58e-08,25;CL:0000047,1.15e-07,8;CL:0000133,1.43e-07,59;CL:0000362,8.34e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;8.85e-10;6!CL:0000114;8.85e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.96e-53!82;UBERON:0002780!5.17e-50!41;UBERON:0001890!5.17e-50!41;UBERON:0006240!5.17e-50!41;UBERON:0005743!6.86e-50!86;UBERON:0003080!1.23e-48!42;UBERON:0001049!4.09e-47!57;UBERON:0005068!4.09e-47!57;UBERON:0006241!4.09e-47!57;UBERON:0007135!4.09e-47!57;UBERON:0002616!3.40e-45!59;UBERON:0000073!4.63e-44!94;UBERON:0001016!4.63e-44!94;UBERON:0001893!5.08e-42!34;UBERON:0002020!8.00e-42!34;UBERON:0003528!8.00e-42!34;UBERON:0001869!1.12e-41!32;UBERON:0000955!1.16e-41!69;UBERON:0006238!1.16e-41!69;UBERON:0002791!8.65e-40!33;UBERON:0003056!4.26e-33!61;UBERON:0003075!1.22e-31!86;UBERON:0007284!1.22e-31!86;UBERON:0000956!1.74e-30!25;UBERON:0000203!1.74e-30!25;UBERON:0002346!8.83e-30!90;UBERON:0007023!5.26e-29!115;UBERON:0004121!2.59e-28!169;UBERON:0000924!2.38e-27!173;UBERON:0006601!2.38e-27!173;UBERON:0000033!5.18e-26!123;UBERON:0000153!1.28e-25!129;UBERON:0007811!1.28e-25!129;UBERON:0002619!8.46e-25!22;UBERON:0001950!3.37e-24!20;UBERON:0000200!2.34e-15!6;UBERON:0002021!5.51e-13!5;UBERON:0002308!1.22e-12!9;UBERON:0000125!1.22e-12!9;UBERON:0004111!2.06e-11!241;UBERON:0003296!3.95e-11!4;UBERON:0010133!3.95e-11!4;UBERON:0000025!7.72e-11!194;UBERON:0000369!2.33e-10!4;UBERON:0002435!2.33e-10!4;UBERON:0000204!2.33e-10!4;UBERON:0010082!2.33e-10!4;UBERON:0000477!1.22e-09!286;UBERON:0001894!3.18e-09!7;UBERON:0006222!3.18e-09!7;UBERON:0009663!6.27e-09!7;UBERON:0000475!1.17e-08!365;UBERON:0000483!1.21e-08!309;UBERON:0002771!1.82e-08!3;UBERON:0000922!1.83e-08!612;UBERON:0000119!1.90e-08!312;UBERON:0000064!2.96e-08!219;UBERON:0005383!3.17e-08!3;UBERON:0005382!3.17e-08!3;UBERON:0001871!5.37e-08!7;UBERON:0000988!6.67e-08!3;UBERON:0002420!7.45e-07!9;UBERON:0007245!7.45e-07!9;UBERON:0010009!7.45e-07!9;UBERON:0010011!7.45e-07!9;UBERON:0000454!7.45e-07!9;UBERON:0000481!8.49e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;3.37e-14;4!UBERON:0010133;3.37e-14;4!UBERON:0001894;1.65e-08;7!UBERON:0002771;6.14e-08;2!UBERON:0001905;6.14e-08;2!UBERON:0000007;6.14e-08;2!UBERON:0002757;6.14e-08;2!UBERON:0010134;6.14e-08;2!UBERON:0005408;6.14e-08;2!UBERON:0001899;6.14e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,5.37e-14,4;UBERON:0010133,5.37e-14,4;UBERON:0001894,2.15e-08,7;UBERON:0006222,2.15e-08,7;UBERON:0000007,6.58e-08,2;UBERON:0002771,8.04e-08,2;UBERON:0001905,9.19e-08,2;UBERON:0002757,9.19e-08,2;UBERON:0010134,9.19e-08,2;UBERON:0005408,9.19e-08,2;UBERON:0001899,9.19e-08,2;UBERON:0001017,3.06e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,2.43947412259191,1.59035721985782,1.74290914304278,0.414644220061482,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,2.31986643833309,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05562704063997,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0,0,0,0,0,0.689486746482929,0,0.868124974666461,0.885741385813839,0.482385754501632,0,1.10579259931225,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.643012593860077,0.550157746388935,0.83088067605837,0,0,0.546746009922222,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.09823638411767,0.250381861413,0,0,0.310482014706917,0,0,0,0.285465333544967,0,1.40500471742064,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.385375350578757,1.41696576325585,0.319267718114302,0.615349092722265,0.252071696221718,0.553258019713743,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,0,0,0.634158101939068,0,0.548257766857182,0,0,0,0.535701835878287,1.00885116665647,1.21393120847326,0.455324382702595,0,0,0,0.611727596791485,0.263091094251396,0.118193840883968,0.222462803784138,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.439762066981716,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.339957450954573,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0.332660356546013,0.488419611665847,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@WIPF3 | |||
}} |
Revision as of 00:51, 14 September 2013
Short description: | p14@WIPF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_WIPF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 344bp_to_AK094250_5end |
EntrezGene: | WIPF3 |
HGNC: | 22004 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.64e-43 | 5 |
Merkel cell | 2.39e-27 | 2 |
keratinocyte | 1.50e-11 | 5 |
stratified squamous epithelial cell | 8.86e-10 | 6 |
keratin accumulating cell | 8.86e-10 | 6 |
stratified epithelial cell | 8.86e-10 | 6 |
keratinizing barrier epithelial cell | 8.86e-10 | 6 |
epithelial fate stem cell | 8.86e-10 | 6 |
stratified epithelial stem cell | 8.86e-10 | 6 |
surface ectodermal cell | 8.86e-10 | 6 |
neural cell | 3.58e-08 | 25 |
neuronal stem cell | 1.15e-07 | 8 |
neurectodermal cell | 1.43e-07 | 59 |
epidermal cell | 8.34e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 5.37e-14 | 4 |
neuroendocrine gland | 5.37e-14 | 4 |
diencephalon | 2.15e-08 | 7 |
future diencephalon | 2.15e-08 | 7 |
pituitary gland | 6.58e-08 | 2 |
middle temporal gyrus | 8.04e-08 | 2 |
pineal body | 9.19e-08 | 2 |
regional part of epithalamus | 9.19e-08 | 2 |
secretory circumventricular organ | 9.19e-08 | 2 |
circumventricular organ | 9.19e-08 | 2 |
epithalamus | 9.19e-08 | 2 |
central nervous system | 3.06e-07 | 81 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.