FFCP PHASE1:Mm9::chr3:73512290..73512306,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12038|HGNC=|MCL_coexpression_id=3415|UniProt=Q03311|association_with_transcript=30bp_to_ENSMUST00000029367,NM_009738,uc008pmw.1,uc008pmx.1_5end|description=CAGE_peak_3_at_Bche_5end|id=chr3:73512290..73512306,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,6.79e-09,25;CL:0000239,6.15e-08,6;CL:0000677,6.15e-08,6;CL:0000584,6.15e-08,6;CL:0000223,2.67e-07,20;CL:0000182,3.16e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.14e-13!22;UBERON:0007499!2.14e-13!22;UBERON:0006925!2.14e-13!22;UBERON:0009497!2.14e-13!22;UBERON:0000015!2.14e-13!22;UBERON:0002423!2.14e-13!22;UBERON:0006235!2.14e-13!22;UBERON:0008835!2.14e-13!22;UBERON:0003894!2.14e-13!22;UBERON:0004161!2.14e-13!22;UBERON:0008836!2.14e-13!22;UBERON:0001007!9.19e-13!128;UBERON:0001555!9.19e-13!128;UBERON:0007026!9.19e-13!128;UBERON:0009854!3.12e-12!23;UBERON:0009856!3.12e-12!23;UBERON:0004119!5.38e-12!130;UBERON:0000925!5.38e-12!130;UBERON:0006595!5.38e-12!130;UBERON:0005409!1.00e-11!59;UBERON:0004921!1.12e-11!126;UBERON:0004185!1.12e-11!126;UBERON:0000160!3.31e-11!43;UBERON:0002365!4.67e-11!25;UBERON:0002330!4.67e-11!25;UBERON:0000344!1.53e-08!15;UBERON:0001242!4.11e-07!13;UBERON:0000060!4.11e-07!13;UBERON:0001262!4.11e-07!13;UBERON:0004786!4.11e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.69e-25,22;UBERON:0007499,7.69e-25,22;UBERON:0006925,7.69e-25,22;UBERON:0009497,7.69e-25,22;UBERON:0000015,7.69e-25,22;UBERON:0002423,7.69e-25,22;UBERON:0006235,7.69e-25,22;UBERON:0008835,7.69e-25,22;UBERON:0003894,7.69e-25,22;UBERON:0004161,7.69e-25,22;UBERON:0008836,7.69e-25,22;UBERON:0009854,1.86e-23,23;UBERON:0009856,1.86e-23,23;UBERON:0001007,1.08e-21,116;UBERON:0001555,1.08e-21,116;UBERON:0007026,1.08e-21,116;UBERON:0004119,4.56e-21,118;UBERON:0000925,4.56e-21,118;UBERON:0006595,4.56e-21,118;UBERON:0002365,5.03e-21,25;UBERON:0002330,5.03e-21,25;UBERON:0004921,1.28e-19,114;UBERON:0005409,2.84e-18,47;UBERON:0000160,3.90e-16,31;UBERON:0003929,6.34e-13,55;UBERON:0000344,1.28e-11,15;UBERON:0000490,3.63e-10,66;UBERON:0003914,7.47e-10,47;UBERON:0005256,1.15e-09,45;UBERON:0001242,4.98e-09,13;UBERON:0001262,4.98e-09,13;UBERON:0004786,4.98e-09,13;UBERON:0005911,1.15e-08,69;UBERON:0011216,8.88e-08,194;UBERON:0005172,1.29e-07,49;UBERON:0005173,1.29e-07,49;UBERON:0002417,1.29e-07,49;UBERON:0000916,1.29e-07,49;UBERON:0001041,4.79e-07,80|phase1_expression=0.160148847104794,2.09385244583617,4.54999239389536,11.7961042409664,11.520601788766,3.18970616632591,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,22.8789164594572,19.0409703285751,2.8711598205751,7.75371593086335,5.38678081714723,8.7410772949932,7.30887376303799,0.221730510655305,0,0,0,0.577703239502549,1.32987716286794,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0,0,0.219686182734472,1.1665793944457,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0.420649922702764,0,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,4.63783181922684,1.72084775396277,2.719885334831,3.2382191498269,11.695975514058,10.7526452903361,3.7919993435573,0,0,0,0.14084341977668,0,0,0,0,0,0,6.39429726426736,0,0,0.867426633830679,0.608930956624282,0.461230994512117,0,0,0.251333182659351,0,1.15679485535929,0,0,0,0,0,0,0,7.66371165625774,0,0,0,0.449371918214468,0.457500602818626,0.125654352112864,0.695297280769106,0,0.41557608911912,0.648965052271031,0.203678727700633,0.373220911830279,0.505445516867349,0,0.260240885925407,0.919608417733892,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0.258703370739016,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.462801338662135,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0.210289948564127,0.102904612379284,21.4772208939469,10.5780226665418,0,0,1.15980715189884,0.80673409849337,1.55664630691409,2.28270751335071,10.9141684155238,1.4822905925161,1.25667604400135,0.994782360205754,0.779856348476481,7.19055526923377,11.0230405436094,27.0832131625939,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0,0,0.123397163921801,12.7474629647474,1.66845105716094,1.76903095601883,2.24862112384854,2.43432145666204,2.41177159752417,1.52775511068852,2.87696137450811,5.83686816390127,4.11842119782122,4.31304619582064,7.44281895337007,4.99260276983297,5.05157755894223,5.74071723270119,9.16642690590398,0.554259570499814,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0,0,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0.80275294993896,0.234423373184406,0,0.504941854408746,0.631016438832513,0.390438744296638,0.861693590931196,0,0.222798674082394,0.566153061577665,0,0.584511715822624,0,2.89189184779626,1.13552068166615,0.178065603667255,0.488660878060728,2.14461159864296,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0.727067458955011,2.13898427030833,1.26414703174326,1.05418608574999,2.06271086496374,0,0.18006109403131,0,0.857348140126369,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.119372344003136,0.164140899745061,7.57850175237612,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.474503990371703,1.42323626988794,3.13215488383224,3.3454127362315,4.80397640241591,4.04593039154462,4.71124697634415,3.40282724579238,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.506868376472335,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0.948033361884535,0.608175645870493,0.205421914329655,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.19318959403219,0,1.46521299413812,0.428736758158132,0,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0.45032120322422,1.35942722695261,1.03552062350364,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.468207537349412,0,0.229741875822453,0.476293691283074,0.115884325944855,0.964546102318525,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0.423073039458382,0.365855945745545,0,0.814824683075171,0.561142271657738,0.355905054372522,0.197008964751127,0.818462086339379,0.309873682371932,0.771626443924566,0,0,1.28922632428979,0.57386499620653,0,0.231867835620421|short_description=p3@Bche}} | ||
|EntrezGene=12038 | |||
|HGNC= | |||
|MCL_coexpression_id=3415 | |||
|UniProt=Q03311 | |||
|association_with_transcript=30bp_to_ENSMUST00000029367,NM_009738,uc008pmw.1,uc008pmx.1_5end | |||
|description=CAGE_peak_3_at_Bche_5end | |||
|id=chr3:73512290..73512306,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.79e-09,25;CL:0000239,6.15e-08,6;CL:0000677,6.15e-08,6;CL:0000584,6.15e-08,6;CL:0000223,2.67e-07,20;CL:0000182,3.16e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.14e-13!22;UBERON:0007499!2.14e-13!22;UBERON:0006925!2.14e-13!22;UBERON:0009497!2.14e-13!22;UBERON:0000015!2.14e-13!22;UBERON:0002423!2.14e-13!22;UBERON:0006235!2.14e-13!22;UBERON:0008835!2.14e-13!22;UBERON:0003894!2.14e-13!22;UBERON:0004161!2.14e-13!22;UBERON:0008836!2.14e-13!22;UBERON:0001007!9.19e-13!128;UBERON:0001555!9.19e-13!128;UBERON:0007026!9.19e-13!128;UBERON:0009854!3.12e-12!23;UBERON:0009856!3.12e-12!23;UBERON:0004119!5.38e-12!130;UBERON:0000925!5.38e-12!130;UBERON:0006595!5.38e-12!130;UBERON:0005409!1.00e-11!59;UBERON:0004921!1.12e-11!126;UBERON:0004185!1.12e-11!126;UBERON:0000160!3.31e-11!43;UBERON:0002365!4.67e-11!25;UBERON:0002330!4.67e-11!25;UBERON:0000344!1.53e-08!15;UBERON:0001242!4.11e-07!13;UBERON:0000060!4.11e-07!13;UBERON:0001262!4.11e-07!13;UBERON:0004786!4.11e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.69e-25,22;UBERON:0007499,7.69e-25,22;UBERON:0006925,7.69e-25,22;UBERON:0009497,7.69e-25,22;UBERON:0000015,7.69e-25,22;UBERON:0002423,7.69e-25,22;UBERON:0006235,7.69e-25,22;UBERON:0008835,7.69e-25,22;UBERON:0003894,7.69e-25,22;UBERON:0004161,7.69e-25,22;UBERON:0008836,7.69e-25,22;UBERON:0009854,1.86e-23,23;UBERON:0009856,1.86e-23,23;UBERON:0001007,1.08e-21,116;UBERON:0001555,1.08e-21,116;UBERON:0007026,1.08e-21,116;UBERON:0004119,4.56e-21,118;UBERON:0000925,4.56e-21,118;UBERON:0006595,4.56e-21,118;UBERON:0002365,5.03e-21,25;UBERON:0002330,5.03e-21,25;UBERON:0004921,1.28e-19,114;UBERON:0005409,2.84e-18,47;UBERON:0000160,3.90e-16,31;UBERON:0003929,6.34e-13,55;UBERON:0000344,1.28e-11,15;UBERON:0000490,3.63e-10,66;UBERON:0003914,7.47e-10,47;UBERON:0005256,1.15e-09,45;UBERON:0001242,4.98e-09,13;UBERON:0001262,4.98e-09,13;UBERON:0004786,4.98e-09,13;UBERON:0005911,1.15e-08,69;UBERON:0011216,8.88e-08,194;UBERON:0005172,1.29e-07,49;UBERON:0005173,1.29e-07,49;UBERON:0002417,1.29e-07,49;UBERON:0000916,1.29e-07,49;UBERON:0001041,4.79e-07,80 | |||
|phase1_expression=0.160148847104794,2.09385244583617,4.54999239389536,11.7961042409664,11.520601788766,3.18970616632591,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,22.8789164594572,19.0409703285751,2.8711598205751,7.75371593086335,5.38678081714723,8.7410772949932,7.30887376303799,0.221730510655305,0,0,0,0.577703239502549,1.32987716286794,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0,0,0.219686182734472,1.1665793944457,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0.420649922702764,0,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,4.63783181922684,1.72084775396277,2.719885334831,3.2382191498269,11.695975514058,10.7526452903361,3.7919993435573,0,0,0,0.14084341977668,0,0,0,0,0,0,6.39429726426736,0,0,0.867426633830679,0.608930956624282,0.461230994512117,0,0,0.251333182659351,0,1.15679485535929,0,0,0,0,0,0,0,7.66371165625774,0,0,0,0.449371918214468,0.457500602818626,0.125654352112864,0.695297280769106,0,0.41557608911912,0.648965052271031,0.203678727700633,0.373220911830279,0.505445516867349,0,0.260240885925407,0.919608417733892,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0.258703370739016,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.462801338662135,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0.210289948564127,0.102904612379284,21.4772208939469,10.5780226665418,0,0,1.15980715189884,0.80673409849337,1.55664630691409,2.28270751335071,10.9141684155238,1.4822905925161,1.25667604400135,0.994782360205754,0.779856348476481,7.19055526923377,11.0230405436094,27.0832131625939,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0,0,0.123397163921801,12.7474629647474,1.66845105716094,1.76903095601883,2.24862112384854,2.43432145666204,2.41177159752417,1.52775511068852,2.87696137450811,5.83686816390127,4.11842119782122,4.31304619582064,7.44281895337007,4.99260276983297,5.05157755894223,5.74071723270119,9.16642690590398,0.554259570499814,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0,0,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0.80275294993896,0.234423373184406,0,0.504941854408746,0.631016438832513,0.390438744296638,0.861693590931196,0,0.222798674082394,0.566153061577665,0,0.584511715822624,0,2.89189184779626,1.13552068166615,0.178065603667255,0.488660878060728,2.14461159864296,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0.727067458955011,2.13898427030833,1.26414703174326,1.05418608574999,2.06271086496374,0,0.18006109403131,0,0.857348140126369,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.119372344003136,0.164140899745061,7.57850175237612,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.474503990371703,1.42323626988794,3.13215488383224,3.3454127362315,4.80397640241591,4.04593039154462,4.71124697634415,3.40282724579238,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.506868376472335,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0.948033361884535,0.608175645870493,0.205421914329655,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.19318959403219,0,1.46521299413812,0.428736758158132,0,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0.45032120322422,1.35942722695261,1.03552062350364,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.468207537349412,0,0.229741875822453,0.476293691283074,0.115884325944855,0.964546102318525,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0.423073039458382,0.365855945745545,0,0.814824683075171,0.561142271657738,0.355905054372522,0.197008964751127,0.818462086339379,0.309873682371932,0.771626443924566,0,0,1.28922632428979,0.57386499620653,0,0.231867835620421 | |||
|short_description=p3@Bche | |||
}} |
Revision as of 02:31, 14 September 2013
Short description: | p3@Bche |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bche_5end |
Coexpression cluster: | MCL_coexpression_mm9:3415 |
Association with transcript: | 30bp_to_ENSMUST00000029367, NM_009738, uc008pmw.1, uc008pmx.1_5end |
EntrezGene: | Bche |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.79e-09 | 25 |
brush border epithelial cell | 6.15e-08 | 6 |
gut absorptive cell | 6.15e-08 | 6 |
enterocyte | 6.15e-08 | 6 |
endodermal cell | 2.67e-07 | 20 |
hepatocyte | 3.16e-07 | 5 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.