FFCP PHASE1:Hg19::chr9:114908292..114908313,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64420|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25413|TSSclassifier=N|UniProt=|association_with_transcript=142bp_to_ENST00000482851_5end|coexpression_cluster_id=C1694|description=CAGE_peak_13_at_SUSD1_5end|id=chr9:114908292..114908313,-|ontology_enrichment_celltype=CL:0000066!2.27e-28!254;CL:0002076!3.87e-18!43;CL:0002368!2.96e-17!13;CL:0000076!2.25e-15!62;CL:0002159!6.34e-14!13;CL:0000223!5.96e-12!59;CL:0002621!1.37e-10!3;CL:0002166!2.87e-10!3;CL:0000362!2.94e-09!8;CL:0000063!2.58e-08!578;CL:0002202!2.99e-08!9;CL:0002632!2.99e-08!9;CL:0000240!3.13e-08!6;CL:0000311!3.13e-08!6;CL:0000079!3.13e-08!6;CL:0000237!3.13e-08!6;CL:0000036!3.13e-08!6;CL:0000357!3.13e-08!6;CL:0000114!3.13e-08!6;CL:0002321!4.70e-08!248;CL:0000220!1.39e-07!246;CL:0002077!3.34e-07!33;CL:0002327!4.82e-07!4;CL:0000317!6.26e-07!2;CL:1000448!6.26e-07!2;CL:0002308!6.26e-07!2;CL:0002140!6.26e-07!2|ontology_enrichment_celltype_v019=CL:0002621;3.43e-34;3!CL:0002328;1.42e-15;3!CL:0002166;1.42e-15;3!CL:0002076;2.12e-15;42!CL:0002368;6.96e-14;13!CL:0002159;1.29e-07;14|ontology_enrichment_celltype_v019_2=CL:0002621,2.45e-34,3;CL:0002076,4.46e-16,42;CL:0002166,1.06e-15,3;CL:0002328,2.38e-15,3;CL:0002368,8.24e-14,13;CL:0000066,5.57e-12,253;CL:0000223,2.11e-11,58;CL:0002159,1.28e-07,14|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!3.85e-12!14;DOID:305!2.29e-08!106;DOID:0050687!6.61e-07!143|ontology_enrichment_disease_v019=DOID:4468;8.76e-07;2|ontology_enrichment_disease_v019_2=DOID:4468,6.42e-07,2|ontology_enrichment_uberon=UBERON:0005153!3.98e-12!37;UBERON:0001949!1.37e-10!3;UBERON:0005157!2.93e-09!51;UBERON:0001004!6.44e-09!72;UBERON:0004807!8.01e-09!28;UBERON:0005911!3.07e-08!82;UBERON:0001708!8.81e-08!4;UBERON:0001704!8.81e-08!4;UBERON:0000065!1.33e-07!53;UBERON:0004119!3.93e-07!169;UBERON:0000925!3.93e-07!169;UBERON:0006595!3.93e-07!169;UBERON:0001911!4.82e-07!4;UBERON:0005333!4.82e-07!4;UBERON:0008425!4.82e-07!4;UBERON:0005311!4.82e-07!4;UBERON:0002419!6.26e-07!2;UBERON:0007771!6.26e-07!2;UBERON:0003297!6.26e-07!2;UBERON:0001821!6.26e-07!2;UBERON:0003487!6.26e-07!2;UBERON:0001820!6.26e-07!2;UBERON:0005089!6.26e-07!2;UBERON:0005088!6.26e-07!2|ontology_enrichment_uberon_v019=UBERON:0001949;3.43e-34;3!UBERON:0004807;9.05e-18;22!UBERON:0004815;1.42e-15;3!UBERON:0002031;1.42e-15;3!UBERON:0003929;4.80e-15;7!UBERON:0003350;3.07e-13;8!UBERON:0001828;3.07e-13;8!UBERON:0001708;6.37e-12;4!UBERON:0008895;6.37e-12;4!UBERON:0011159;1.01e-09;5!UBERON:0002185;1.01e-09;5!UBERON:0005911;1.50e-09;36!UBERON:0000486;5.23e-09;12!UBERON:0003729;2.36e-08;13!UBERON:0000485;3.45e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.45e-34,3;UBERON:0004815,2.38e-15,3;UBERON:0002031,2.38e-15,3;UBERON:0004807,8.30e-14,28;UBERON:0003350,2.71e-13,8;UBERON:0001828,2.71e-13,8;UBERON:0001708,5.10e-12,4;UBERON:0008895,5.10e-12,4;UBERON:0011159,8.49e-10,5;UBERON:0002185,1.38e-09,5;UBERON:0001004,1.11e-08,74;UBERON:0003729,2.19e-08,13;UBERON:0010188,2.61e-08,6;UBERON:0002539,2.61e-08,6;UBERON:0008816,2.61e-08,6;UBERON:0005911,9.67e-08,82;UBERON:0005153,2.78e-07,37|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,1.35282597214308,3.00020732649918,2.86804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878002283269004,1.1240175325762,0.502644862058154,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.6798212819886,1.27597587518148,0,0.581267877027924,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,2.19940580600526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80709058424599,0.460404944679482,0,0,0,0,0.462092022626489,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,1.32227932288782,0.576570202095319,3.1903178123646,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,0.670302275535787,0,0,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43789361835723,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68798451622422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587954384486266,0,0,0,0,0,0,0,0,0,0.68520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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64420 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25413 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=142bp_to_ENST00000482851_5end | |||
|coexpression_cluster_id=C1694 | |||
|description=CAGE_peak_13_at_SUSD1_5end | |||
|id=chr9:114908292..114908313,- | |||
|ontology_enrichment_celltype=CL:0000066!2.27e-28!254;CL:0002076!3.87e-18!43;CL:0002368!2.96e-17!13;CL:0000076!2.25e-15!62;CL:0002159!6.34e-14!13;CL:0000223!5.96e-12!59;CL:0002621!1.37e-10!3;CL:0002166!2.87e-10!3;CL:0000362!2.94e-09!8;CL:0000063!2.58e-08!578;CL:0002202!2.99e-08!9;CL:0002632!2.99e-08!9;CL:0000240!3.13e-08!6;CL:0000311!3.13e-08!6;CL:0000079!3.13e-08!6;CL:0000237!3.13e-08!6;CL:0000036!3.13e-08!6;CL:0000357!3.13e-08!6;CL:0000114!3.13e-08!6;CL:0002321!4.70e-08!248;CL:0000220!1.39e-07!246;CL:0002077!3.34e-07!33;CL:0002327!4.82e-07!4;CL:0000317!6.26e-07!2;CL:1000448!6.26e-07!2;CL:0002308!6.26e-07!2;CL:0002140!6.26e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002621;3.43e-34;3!CL:0002328;1.42e-15;3!CL:0002166;1.42e-15;3!CL:0002076;2.12e-15;42!CL:0002368;6.96e-14;13!CL:0002159;1.29e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.45e-34,3;CL:0002076,4.46e-16,42;CL:0002166,1.06e-15,3;CL:0002328,2.38e-15,3;CL:0002368,8.24e-14,13;CL:0000066,5.57e-12,253;CL:0000223,2.11e-11,58;CL:0002159,1.28e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.85e-12!14;DOID:305!2.29e-08!106;DOID:0050687!6.61e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4468;8.76e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,6.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005153!3.98e-12!37;UBERON:0001949!1.37e-10!3;UBERON:0005157!2.93e-09!51;UBERON:0001004!6.44e-09!72;UBERON:0004807!8.01e-09!28;UBERON:0005911!3.07e-08!82;UBERON:0001708!8.81e-08!4;UBERON:0001704!8.81e-08!4;UBERON:0000065!1.33e-07!53;UBERON:0004119!3.93e-07!169;UBERON:0000925!3.93e-07!169;UBERON:0006595!3.93e-07!169;UBERON:0001911!4.82e-07!4;UBERON:0005333!4.82e-07!4;UBERON:0008425!4.82e-07!4;UBERON:0005311!4.82e-07!4;UBERON:0002419!6.26e-07!2;UBERON:0007771!6.26e-07!2;UBERON:0003297!6.26e-07!2;UBERON:0001821!6.26e-07!2;UBERON:0003487!6.26e-07!2;UBERON:0001820!6.26e-07!2;UBERON:0005089!6.26e-07!2;UBERON:0005088!6.26e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.43e-34;3!UBERON:0004807;9.05e-18;22!UBERON:0004815;1.42e-15;3!UBERON:0002031;1.42e-15;3!UBERON:0003929;4.80e-15;7!UBERON:0003350;3.07e-13;8!UBERON:0001828;3.07e-13;8!UBERON:0001708;6.37e-12;4!UBERON:0008895;6.37e-12;4!UBERON:0011159;1.01e-09;5!UBERON:0002185;1.01e-09;5!UBERON:0005911;1.50e-09;36!UBERON:0000486;5.23e-09;12!UBERON:0003729;2.36e-08;13!UBERON:0000485;3.45e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.45e-34,3;UBERON:0004815,2.38e-15,3;UBERON:0002031,2.38e-15,3;UBERON:0004807,8.30e-14,28;UBERON:0003350,2.71e-13,8;UBERON:0001828,2.71e-13,8;UBERON:0001708,5.10e-12,4;UBERON:0008895,5.10e-12,4;UBERON:0011159,8.49e-10,5;UBERON:0002185,1.38e-09,5;UBERON:0001004,1.11e-08,74;UBERON:0003729,2.19e-08,13;UBERON:0010188,2.61e-08,6;UBERON:0002539,2.61e-08,6;UBERON:0008816,2.61e-08,6;UBERON:0005911,9.67e-08,82;UBERON:0005153,2.78e-07,37 | |||
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|short_description=p13@SUSD1 | |||
}} |
Revision as of 07:00, 14 September 2013
Short description: | p13@SUSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SUSD1_5end |
Coexpression cluster: | C1694_squamous_Prostate_Sebocyte_Gingival_Mallassezderived_clear_Urothelial |
Association with transcript: | 142bp_to_ENST00000482851_5end |
EntrezGene: | SUSD1 |
HGNC: | 25413 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.45e-34 | 3 |
endo-epithelial cell | 4.46e-16 | 42 |
epithelial cell of Malassez | 1.06e-15 | 3 |
bronchial epithelial cell | 2.38e-15 | 3 |
respiratory epithelial cell | 8.24e-14 | 13 |
epithelial cell | 5.57e-12 | 253 |
endodermal cell | 2.11e-11 | 58 |
general ecto-epithelial cell | 1.28e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.45e-34 | 3 |
lower respiratory tract epithelium | 2.38e-15 | 3 |
epithelium of bronchus | 2.38e-15 | 3 |
respiratory system epithelium | 8.30e-14 | 28 |
epithelium of mucosa | 2.71e-13 | 8 |
gingiva | 2.71e-13 | 8 |
jaw skeleton | 5.10e-12 | 4 |
splanchnocranium | 5.10e-12 | 4 |
primary subdivision of cranial skeletal system | 8.49e-10 | 5 |
bronchus | 1.38e-09 | 5 |
respiratory system | 1.11e-08 | 74 |
mouth mucosa | 2.19e-08 | 13 |
protuberance | 2.61e-08 | 6 |
pharyngeal arch | 2.61e-08 | 6 |
embryonic head | 2.61e-08 | 6 |
endo-epithelium | 9.67e-08 | 82 |
epithelial bud | 2.78e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.42e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.