FFCP PHASE1:Mm9::chr6:117857679..117857689,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1253|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:117857679..117857689,-|id=chr6:117857679..117857689,-|ontology_enrichment_celltype=CL:0000988!1.61e-10!32;CL:0002032!1.61e-10!32;CL:0000037!1.61e-10!32;CL:0000566!1.61e-10!32;CL:0000837!1.61e-10!32;CL:0000063!2.36e-10!66;CL:0002320!2.92e-10!46;CL:0000134!2.92e-10!46;CL:0000219!6.99e-09!54;CL:0000838!2.44e-08!12;CL:0002031!3.70e-08!25;CL:0000791!6.69e-08!9;CL:0000789!6.69e-08!9;CL:0002420!6.69e-08!9;CL:0002419!6.69e-08!9;CL:0000790!6.69e-08!9;CL:0000084!1.89e-07!11;CL:0000827!1.89e-07!11;CL:0000034!2.09e-07!97;CL:0000542!2.15e-07!13;CL:0000051!2.15e-07!13;CL:0000624!5.19e-07!8;CL:0000738!5.62e-07!17;CL:0002087!5.62e-07!17|ontology_enrichment_celltype_v019_2=CL:0000034,9.62e-13,97;CL:0002250,7.26e-12,3;CL:0000988,1.17e-10,32;CL:0002032,1.17e-10,32;CL:0000037,1.17e-10,32;CL:0000837,1.17e-10,32;CL:0002320,2.55e-10,46;CL:0000134,2.55e-10,46;CL:0000723,2.12e-09,91;CL:0000048,2.12e-09,91;CL:0000219,1.78e-08,54;CL:0000838,3.38e-08,12;CL:0000542,1.51e-07,13;CL:0000051,1.51e-07,13;CL:0000791,2.91e-07,9;CL:0000789,2.91e-07,9;CL:0002420,2.91e-07,9;CL:0002419,2.91e-07,9;CL:0000790,2.91e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.92e-10!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.55e-10,46|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.467225281191051,2.7115897922731,1.12630977721333,2.34064526321993,0.34243593645101,0.159544317990673,0.856003649656029,0.874204024189974,0.333109761815663,0,0,0,0.411343300817216,0.84877930359606,0.17008658030214,0.496454756004426,0,0.159992422793407,0,0.57423196411502,0,0.430942465371778,0,0,0,1.90509202037889,0.61506478758457,0,1.44425809875637,1.82858109894342,1.22501613757421,1.67412652294763,1.5626706890476,0,4.70585190424811,2.04913645487534,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0,0,0,0,2.18117387875057,0.725362142011344,2.01656279485478,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0.0755715601067855,4.05810284182349,0.860423876981386,2.03991400112325,0.539703191637817,0,0.448026887097336,0,0.681721290312231,0,0,0.422530259330042,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0.838705871541442,1.79970819298022,1.01656181658452,0,0,0,0,0,0,0,0.203678727700633,0,0.252722758433675,0,0,0.229902104433473,0,0.30140963567143,0,0.12811372028485,0,0,0.431135985865684,0,0,0,0,0,0,0,0,2.83082697826187,1.13665399758237,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0.482354319504834,0,0,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0.491764273019036,0,0,0,0.327869890753351,0,0.315508219416257,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,1.5298058699447,2.37917468950219,1.10559979043539,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,1.69107881605257,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0.316011120628178,0,0.308132871494482,0,0,0,0.120195449519969,0.443068581523732,0,0,0.100826185136841,0,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0.237270036248348,0,0.409231043169689,0,0,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p@chr6:117857679..117857689,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1253 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:117857679..117857689,- | |||
|id=chr6:117857679..117857689,- | |||
|ontology_enrichment_celltype=CL:0000988!1.61e-10!32;CL:0002032!1.61e-10!32;CL:0000037!1.61e-10!32;CL:0000566!1.61e-10!32;CL:0000837!1.61e-10!32;CL:0000063!2.36e-10!66;CL:0002320!2.92e-10!46;CL:0000134!2.92e-10!46;CL:0000219!6.99e-09!54;CL:0000838!2.44e-08!12;CL:0002031!3.70e-08!25;CL:0000791!6.69e-08!9;CL:0000789!6.69e-08!9;CL:0002420!6.69e-08!9;CL:0002419!6.69e-08!9;CL:0000790!6.69e-08!9;CL:0000084!1.89e-07!11;CL:0000827!1.89e-07!11;CL:0000034!2.09e-07!97;CL:0000542!2.15e-07!13;CL:0000051!2.15e-07!13;CL:0000624!5.19e-07!8;CL:0000738!5.62e-07!17;CL:0002087!5.62e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,9.62e-13,97;CL:0002250,7.26e-12,3;CL:0000988,1.17e-10,32;CL:0002032,1.17e-10,32;CL:0000037,1.17e-10,32;CL:0000837,1.17e-10,32;CL:0002320,2.55e-10,46;CL:0000134,2.55e-10,46;CL:0000723,2.12e-09,91;CL:0000048,2.12e-09,91;CL:0000219,1.78e-08,54;CL:0000838,3.38e-08,12;CL:0000542,1.51e-07,13;CL:0000051,1.51e-07,13;CL:0000791,2.91e-07,9;CL:0000789,2.91e-07,9;CL:0002420,2.91e-07,9;CL:0002419,2.91e-07,9;CL:0000790,2.91e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.92e-10!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.55e-10,46 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.467225281191051,2.7115897922731,1.12630977721333,2.34064526321993,0.34243593645101,0.159544317990673,0.856003649656029,0.874204024189974,0.333109761815663,0,0,0,0.411343300817216,0.84877930359606,0.17008658030214,0.496454756004426,0,0.159992422793407,0,0.57423196411502,0,0.430942465371778,0,0,0,1.90509202037889,0.61506478758457,0,1.44425809875637,1.82858109894342,1.22501613757421,1.67412652294763,1.5626706890476,0,4.70585190424811,2.04913645487534,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0,0,0,0,2.18117387875057,0.725362142011344,2.01656279485478,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0.0755715601067855,4.05810284182349,0.860423876981386,2.03991400112325,0.539703191637817,0,0.448026887097336,0,0.681721290312231,0,0,0.422530259330042,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0.838705871541442,1.79970819298022,1.01656181658452,0,0,0,0,0,0,0,0.203678727700633,0,0.252722758433675,0,0,0.229902104433473,0,0.30140963567143,0,0.12811372028485,0,0,0.431135985865684,0,0,0,0,0,0,0,0,2.83082697826187,1.13665399758237,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0.482354319504834,0,0,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0.491764273019036,0,0,0,0.327869890753351,0,0.315508219416257,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,1.5298058699447,2.37917468950219,1.10559979043539,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,1.69107881605257,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0.316011120628178,0,0.308132871494482,0,0,0,0.120195449519969,0.443068581523732,0,0,0.100826185136841,0,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0.237270036248348,0,0.409231043169689,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr6:117857679..117857689,- | |||
}} |
Revision as of 08:39, 14 September 2013
Short description: | p@chr6:117857679..117857689, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:117857679..117857689, - |
Coexpression cluster: | MCL_coexpression_mm9:1253 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 9.62e-13 | 97 |
intestinal crypt stem cell | 7.26e-12 | 3 |
hematopoietic cell | 1.17e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.17e-10 | 32 |
hematopoietic stem cell | 1.17e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.17e-10 | 32 |
connective tissue cell | 2.55e-10 | 46 |
mesenchymal cell | 2.55e-10 | 46 |
somatic stem cell | 2.12e-09 | 91 |
multi fate stem cell | 2.12e-09 | 91 |
motile cell | 1.78e-08 | 54 |
lymphoid lineage restricted progenitor cell | 3.38e-08 | 12 |
lymphocyte | 1.51e-07 | 13 |
common lymphoid progenitor | 1.51e-07 | 13 |
mature alpha-beta T cell | 2.91e-07 | 9 |
alpha-beta T cell | 2.91e-07 | 9 |
immature T cell | 2.91e-07 | 9 |
mature T cell | 2.91e-07 | 9 |
immature alpha-beta T cell | 2.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.55e-10 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.