FFCP PHASE1:Mm9::chr6:147212455..147212462,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19227|HGNC=|MCL_coexpression_id=72|UniProt=Q540C1,Q924X4|association_with_transcript=144bp_to_NM_008970,uc009esx.2_5end|description=CAGE_peak_6_at_Pthlh_5end|id=chr6:147212455..147212462,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,4.90e-53,3;CL:0002202,4.90e-53,3;CL:0000069,4.90e-53,3;CL:0002632,4.90e-53,3;CL:0002368,4.90e-53,3;CL:0000307,4.90e-53,3;CL:0000377,4.90e-53,3;CL:0002076,2.29e-11,15;CL:0000223,1.01e-08,20;CL:0000066,4.03e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!1.61e-07!5;UBERON:0001003!1.61e-07!5;UBERON:0002097!1.61e-07!5;UBERON:0002199!1.61e-07!5;UBERON:0007029!1.61e-07!5;UBERON:0007376!1.61e-07!5;UBERON:0002416!1.61e-07!5;UBERON:0007383!1.61e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.90e-53,3;UBERON:0001005,4.90e-53,3;UBERON:0007196,4.90e-53,3;UBERON:0001558,4.90e-53,3;UBERON:0005178,4.01e-10,17;UBERON:0005181,4.01e-10,17;UBERON:0002224,4.01e-10,17;UBERON:0000915,4.01e-10,17;UBERON:0008947,4.01e-10,17;UBERON:0003258,4.01e-10,17;UBERON:0001911,6.19e-10,2;UBERON:0000076,6.19e-10,2;UBERON:0005333,6.19e-10,2;UBERON:0008425,6.19e-10,2;UBERON:0005311,6.19e-10,2|phase1_expression=0.640595388419176,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0,0,0,0.215471232685889,0,0,0,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61119299110724,0.294628585473668,0.142371680799103,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14420435337007,6.84071636782766,4.54972000513305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.511430914660661,0,0,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0,0,0,0.204109497453984,0.12811372028485,0,0,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0.243206428637567,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44234991113325,0,0,0.117211686592203,0,0.504941854408746,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,0,0.567760340833074,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0.65954501176592,0.807322133479528,0.603129249281559,0.477489376012546,0.492422699235184,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0.218362563746178,0,0.0826534557253359,1.30877970992015,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0.228620419965,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0,0,0,0,0.561142271657738,0,0,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p6@Pthlh}} | ||
|EntrezGene=19227 | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt=Q540C1,Q924X4 | |||
|association_with_transcript=144bp_to_NM_008970,uc009esx.2_5end | |||
|description=CAGE_peak_6_at_Pthlh_5end | |||
|id=chr6:147212455..147212462,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.90e-53,3;CL:0002202,4.90e-53,3;CL:0000069,4.90e-53,3;CL:0002632,4.90e-53,3;CL:0002368,4.90e-53,3;CL:0000307,4.90e-53,3;CL:0000377,4.90e-53,3;CL:0002076,2.29e-11,15;CL:0000223,1.01e-08,20;CL:0000066,4.03e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!1.61e-07!5;UBERON:0001003!1.61e-07!5;UBERON:0002097!1.61e-07!5;UBERON:0002199!1.61e-07!5;UBERON:0007029!1.61e-07!5;UBERON:0007376!1.61e-07!5;UBERON:0002416!1.61e-07!5;UBERON:0007383!1.61e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.90e-53,3;UBERON:0001005,4.90e-53,3;UBERON:0007196,4.90e-53,3;UBERON:0001558,4.90e-53,3;UBERON:0005178,4.01e-10,17;UBERON:0005181,4.01e-10,17;UBERON:0002224,4.01e-10,17;UBERON:0000915,4.01e-10,17;UBERON:0008947,4.01e-10,17;UBERON:0003258,4.01e-10,17;UBERON:0001911,6.19e-10,2;UBERON:0000076,6.19e-10,2;UBERON:0005333,6.19e-10,2;UBERON:0008425,6.19e-10,2;UBERON:0005311,6.19e-10,2 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0,0,0,0.215471232685889,0,0,0,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61119299110724,0.294628585473668,0.142371680799103,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14420435337007,6.84071636782766,4.54972000513305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.511430914660661,0,0,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0,0,0,0.204109497453984,0.12811372028485,0,0,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0.243206428637567,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44234991113325,0,0,0.117211686592203,0,0.504941854408746,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,0,0.567760340833074,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0.65954501176592,0.807322133479528,0.603129249281559,0.477489376012546,0.492422699235184,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0.218362563746178,0,0.0826534557253359,1.30877970992015,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0.228620419965,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0,0,0,0,0.561142271657738,0,0,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p6@Pthlh | |||
}} |
Revision as of 09:24, 14 September 2013
Short description: | p6@Pthlh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pthlh_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | 144bp_to_NM_008970, uc009esx.2_5end |
EntrezGene: | Pthlh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.90e-53 | 3 |
epithelial cell of tracheobronchial tree | 4.90e-53 | 3 |
branched duct epithelial cell | 4.90e-53 | 3 |
epithelial cell of lower respiratory tract | 4.90e-53 | 3 |
respiratory epithelial cell | 4.90e-53 | 3 |
tracheal epithelial cell | 4.90e-53 | 3 |
tracheoblast | 4.90e-53 | 3 |
endo-epithelial cell | 2.29e-11 | 15 |
endodermal cell | 1.01e-08 | 20 |
epithelial cell | 4.03e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
trachea | 4.90e-53 | 3 |
respiratory airway | 4.90e-53 | 3 |
tracheobronchial tree | 4.90e-53 | 3 |
lower respiratory tract | 4.90e-53 | 3 |
thoracic cavity element | 4.01e-10 | 17 |
thoracic segment organ | 4.01e-10 | 17 |
thoracic cavity | 4.01e-10 | 17 |
thoracic segment of trunk | 4.01e-10 | 17 |
respiratory primordium | 4.01e-10 | 17 |
endoderm of foregut | 4.01e-10 | 17 |
mammary gland | 6.19e-10 | 2 |
external ectoderm | 6.19e-10 | 2 |
mammary bud | 6.19e-10 | 2 |
mammary ridge | 6.19e-10 | 2 |
mammary placode | 6.19e-10 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.