FFCP PHASE1:Mm9::chr6:39542589..39542616,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68198|HGNC=|MCL_coexpression_id=282|UniProt=|association_with_transcript=2bp_to_ENSMUST00000146793_5end|description=CAGE_peak_1_at_Ndufb2_5end|id=chr6:39542589..39542616,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!3.96e-08!114;UBERON:0004111!4.38e-08!122;UBERON:0003103!6.67e-08!43;UBERON:0007100!1.56e-07!18;UBERON:0000948!1.56e-07!18;UBERON:0005498!1.56e-07!18;UBERON:0004140!1.56e-07!18;UBERON:0009881!1.56e-07!18;UBERON:0004141!1.56e-07!18;UBERON:0003084!1.56e-07!18;UBERON:0007005!1.56e-07!18;UBERON:0004139!1.56e-07!18;UBERON:0004291!1.56e-07!18;UBERON:0004535!5.05e-07!23;UBERON:0001009!5.05e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.96e-08,114;UBERON:0004111,4.38e-08,122;UBERON:0010314,6.24e-08,92;UBERON:0003103,6.67e-08,43;UBERON:0007100,1.56e-07,18;UBERON:0000948,1.56e-07,18;UBERON:0005498,1.56e-07,18;UBERON:0004140,1.56e-07,18;UBERON:0009881,1.56e-07,18;UBERON:0004141,1.56e-07,18;UBERON:0003084,1.56e-07,18;UBERON:0007005,1.56e-07,18;UBERON:0004139,1.56e-07,18;UBERON:0004291,1.56e-07,18;UBERON:0000073,3.18e-07,54;UBERON:0004535,5.05e-07,23;UBERON:0001009,5.05e-07,23|phase1_expression=65.9813250071751,80.6133191646924,98.2798357081398,45.6720959073313,64.1146534331324,54.7286426432761,61.6737371172188,37.7040104449403,31.3958850398217,33.9393563166891,59.4126349742502,57.4359544766422,32.5281386869291,34.00653654099,38.3076226088012,55.0732727300327,34.9780939064073,37.5399976776303,34.6899517022519,46.2584720459853,56.2136147898571,45.0780918452019,51.1951586712313,92.7956052201759,101.398902231689,151.02300656225,119.751834932223,91.1443314261311,137.576955686415,118.958221246687,118.625823200588,49.5323925298512,35.6737576799051,95.0890086092632,117.273757619017,134.650062740379,132.097573501753,39.7605049200062,71.8828516961896,29.8408534065065,39.411509698078,33.4692287629638,30.5871522409627,70.2504244303721,62.853697356099,54.3298386398577,152.566312147868,128.634842264463,88.0941592765232,103.825566105667,82.8719616022146,77.6263847570847,34.395434241836,19.5847778343063,16.1325023588383,53.7672221315129,58.4528217475064,71.6784208265645,61.5042041013177,90.9864484347897,76.0597684207415,76.5788642476239,76.479352465558,85.4904731417329,131.519226221408,107.992977471807,121.038444649436,153.3031038233,37.5356396556689,70.7431116858059,54.4741649900079,160.250202250534,175.14875297463,48.016393292262,49.7437994584647,43.203282970671,196.006268178912,87.8488886026092,105.374081813783,53.8096053939191,66.8774674733614,64.5932579490382,157.459211436779,159.824581248997,100.694045284918,144.073378296624,103.788955302546,86.6757423087648,52.3267995932302,42.7735030204406,52.7553369437054,209.943425983458,101.995700056163,173.784427707377,106.563332461418,87.8132698710778,109.546647702766,71.4103051602062,122.618994172554,85.5081770315023,74.7878559014173,20.5322363862909,5.09610479413291,7.11066703153331,107.379556341562,86.1423542615335,85.4336312074984,94.5442524073816,15.018397251536,42.0091253553454,58.6380404469539,98.0378840165095,62.0355687618797,81.9931164606267,31.1610073909618,57.8066320116507,25.9554716121093,117.703876532808,32.7305904221453,44.8094174354323,60.068893021227,75.6405394890946,111.835056730873,64.9973369365635,60.5300982690885,66.9297484646509,76.5618645592831,116.381129812721,68.1096417111627,84.7815019031297,73.2000964509802,42.596825366261,66.4008903134496,79.0160763150721,94.3357722300403,85.663386899776,30.9591666104962,52.7485555386794,71.2678178782963,51.7686965480726,46.4529981376852,51.038267184231,33.6716182736003,45.0607405328788,25.8538696775046,37.4092063231761,40.4791450098029,72.1782404361854,31.9040629540606,24.3946843416487,35.8940293294456,51.2918013880525,55.6094498451196,28.9049298213398,49.3877127379064,44.9817443009795,103.225338535046,82.3513302767089,60.8109888706568,66.2802472113606,106.94388335138,129.824746313392,62.7373549300807,128.683807562802,141.000141179064,140.915570518747,163.110228050968,129.726295369925,124.736366234418,214.566875551377,200.239959578264,314.47617295189,283.219648725455,279.551970277854,75.0735116373934,46.1012663459194,69.7183632095814,56.856871832662,44.7905326123991,47.144044387669,29.6395161040815,36.1013509075783,50.9245720404753,58.7797184687808,64.0614233085091,64.8913881612603,67.6091711672725,62.4723322209214,63.7532564879523,53.0303451105991,71.1094184087744,65.9157614471955,51.2103332573321,54.9535345652796,24.7957018480777,60.4844443700583,61.4829384321374,39.3461949584687,58.9364525998078,88.7136989357409,119.790029342969,130.92439092103,108.501661513896,35.8716977289602,43.2429789249047,38.9011454425797,44.8320868268591,45.3413060334544,76.6423813862074,59.8407965897686,39.0745896527835,82.6429853696125,37.3797336971122,76.2888942720432,99.8520553966594,90.1706594271189,110.867601556542,115.786445127208,37.5048976038208,59.1213204723912,27.5410810187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| ||
|EntrezGene=68198 | |||
|HGNC= | |||
|MCL_coexpression_id=282 | |||
|UniProt= | |||
|association_with_transcript=2bp_to_ENSMUST00000146793_5end | |||
|description=CAGE_peak_1_at_Ndufb2_5end | |||
|id=chr6:39542589..39542616,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.96e-08!114;UBERON:0004111!4.38e-08!122;UBERON:0003103!6.67e-08!43;UBERON:0007100!1.56e-07!18;UBERON:0000948!1.56e-07!18;UBERON:0005498!1.56e-07!18;UBERON:0004140!1.56e-07!18;UBERON:0009881!1.56e-07!18;UBERON:0004141!1.56e-07!18;UBERON:0003084!1.56e-07!18;UBERON:0007005!1.56e-07!18;UBERON:0004139!1.56e-07!18;UBERON:0004291!1.56e-07!18;UBERON:0004535!5.05e-07!23;UBERON:0001009!5.05e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.96e-08,114;UBERON:0004111,4.38e-08,122;UBERON:0010314,6.24e-08,92;UBERON:0003103,6.67e-08,43;UBERON:0007100,1.56e-07,18;UBERON:0000948,1.56e-07,18;UBERON:0005498,1.56e-07,18;UBERON:0004140,1.56e-07,18;UBERON:0009881,1.56e-07,18;UBERON:0004141,1.56e-07,18;UBERON:0003084,1.56e-07,18;UBERON:0007005,1.56e-07,18;UBERON:0004139,1.56e-07,18;UBERON:0004291,1.56e-07,18;UBERON:0000073,3.18e-07,54;UBERON:0004535,5.05e-07,23;UBERON:0001009,5.05e-07,23 | |||
|phase1_expression=65.9813250071751,80.6133191646924,98.2798357081398,45.6720959073313,64.1146534331324,54.7286426432761,61.6737371172188,37.7040104449403,31.3958850398217,33.9393563166891,59.4126349742502,57.4359544766422,32.5281386869291,34.00653654099,38.3076226088012,55.0732727300327,34.9780939064073,37.5399976776303,34.6899517022519,46.2584720459853,56.2136147898571,45.0780918452019,51.1951586712313,92.7956052201759,101.398902231689,151.02300656225,119.751834932223,91.1443314261311,137.576955686415,118.958221246687,118.625823200588,49.5323925298512,35.6737576799051,95.0890086092632,117.273757619017,134.650062740379,132.097573501753,39.7605049200062,71.8828516961896,29.8408534065065,39.411509698078,33.4692287629638,30.5871522409627,70.2504244303721,62.853697356099,54.3298386398577,152.566312147868,128.634842264463,88.0941592765232,103.825566105667,82.8719616022146,77.6263847570847,34.395434241836,19.5847778343063,16.1325023588383,53.7672221315129,58.4528217475064,71.6784208265645,61.5042041013177,90.9864484347897,76.0597684207415,76.5788642476239,76.479352465558,85.4904731417329,131.519226221408,107.992977471807,121.038444649436,153.3031038233,37.5356396556689,70.7431116858059,54.4741649900079,160.250202250534,175.14875297463,48.016393292262,49.7437994584647,43.203282970671,196.006268178912,87.8488886026092,105.374081813783,53.8096053939191,66.8774674733614,64.5932579490382,157.459211436779,159.824581248997,100.694045284918,144.073378296624,103.788955302546,86.6757423087648,52.3267995932302,42.7735030204406,52.7553369437054,209.943425983458,101.995700056163,173.784427707377,106.563332461418,87.8132698710778,109.546647702766,71.4103051602062,122.618994172554,85.5081770315023,74.7878559014173,20.5322363862909,5.09610479413291,7.11066703153331,107.379556341562,86.1423542615335,85.4336312074984,94.5442524073816,15.018397251536,42.0091253553454,58.6380404469539,98.0378840165095,62.0355687618797,81.9931164606267,31.1610073909618,57.8066320116507,25.9554716121093,117.703876532808,32.7305904221453,44.8094174354323,60.068893021227,75.6405394890946,111.835056730873,64.9973369365635,60.5300982690885,66.9297484646509,76.5618645592831,116.381129812721,68.1096417111627,84.7815019031297,73.2000964509802,42.596825366261,66.4008903134496,79.0160763150721,94.3357722300403,85.663386899776,30.9591666104962,52.7485555386794,71.2678178782963,51.7686965480726,46.4529981376852,51.038267184231,33.6716182736003,45.0607405328788,25.8538696775046,37.4092063231761,40.4791450098029,72.1782404361854,31.9040629540606,24.3946843416487,35.8940293294456,51.2918013880525,55.6094498451196,28.9049298213398,49.3877127379064,44.9817443009795,103.225338535046,82.3513302767089,60.8109888706568,66.2802472113606,106.94388335138,129.824746313392,62.7373549300807,128.683807562802,141.000141179064,140.915570518747,163.110228050968,129.726295369925,124.736366234418,214.566875551377,200.239959578264,314.47617295189,283.219648725455,279.551970277854,75.0735116373934,46.1012663459194,69.7183632095814,56.856871832662,44.7905326123991,47.144044387669,29.6395161040815,36.1013509075783,50.9245720404753,58.7797184687808,64.0614233085091,64.8913881612603,67.6091711672725,62.4723322209214,63.7532564879523,53.0303451105991,71.1094184087744,65.9157614471955,51.2103332573321,54.9535345652796,24.7957018480777,60.4844443700583,61.4829384321374,39.3461949584687,58.9364525998078,88.7136989357409,119.790029342969,130.92439092103,108.501661513896,35.8716977289602,43.2429789249047,38.9011454425797,44.8320868268591,45.3413060334544,76.6423813862074,59.8407965897686,39.0745896527835,82.6429853696125,37.3797336971122,76.2888942720432,99.8520553966594,90.1706594271189,110.867601556542,115.786445127208,37.5048976038208,59.1213204723912,27.5410810187024,55.3368979627113,56.560349837529,37.1863891520831,36.4206770555601,27.123577052234,32.7881099740877,42.5212204125648,25.0343986792255,51.9446707648889,50.2513297229756,38.7659476998451,25.6345182696763,45.1441717569529,67.371705403608,41.6664486920146,109.977154141637,105.138882873206,80.6559931253243,206.268747525973,30.6042972833769,39.4343131739605,30.1592756825919,26.2865677747807,23.6166594527338,23.2122755246843,29.5511812222673,32.7326560860669,27.2748566783101,54.945945108129,36.478601898525,50.214500234166,27.5278961307544,35.4685764390951,54.4255067193848,61.1807203110553,56.8368287093732,81.477394454548,57.5838691117507,63.9465107723369,42.8990966659247,45.4417161846882,45.6316644332443,67.6318661982646,93.8225616317489,67.0381031113214,48.6828636227917,52.5778394571426,67.5252329345979,54.2272698629928,43.6256974759993,69.2071012296034,49.3647061806363,55.4126207388571,37.5474732901937,44.0610707396746,67.0406330087084,43.0353120177263,28.2562746717835,31.362720962641,39.0347564890256,32.6640390492672,54.2154356131522,85.6664895288555,34.8576596827619,47.2625927635779,42.2243522402943,47.0921142511728,35.2671107520245,39.5786239647284,48.7838094082365,48.0033481470147,46.5733911720908,84.9656850033451,31.1590953677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| |||
|short_description=p1@Ndufb2 | |||
}} |
Revision as of 09:48, 14 September 2013
Short description: | p1@Ndufb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ndufb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:282 |
Association with transcript: | 2bp_to_ENSMUST00000146793_5end |
EntrezGene: | Ndufb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 3.96e-08 | 114 |
anatomical conduit | 4.38e-08 | 122 |
structure with developmental contribution from neural crest | 6.24e-08 | 92 |
compound organ | 6.67e-08 | 43 |
primary circulatory organ | 1.56e-07 | 18 |
heart | 1.56e-07 | 18 |
primitive heart tube | 1.56e-07 | 18 |
primary heart field | 1.56e-07 | 18 |
anterior lateral plate mesoderm | 1.56e-07 | 18 |
heart tube | 1.56e-07 | 18 |
heart primordium | 1.56e-07 | 18 |
cardiac mesoderm | 1.56e-07 | 18 |
cardiogenic plate | 1.56e-07 | 18 |
heart rudiment | 1.56e-07 | 18 |
regional part of nervous system | 3.18e-07 | 54 |
cardiovascular system | 5.05e-07 | 23 |
circulatory system | 5.05e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.