FFCP PHASE1:Hg19::chrX:100129320..100129329,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27035|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7889|TSSclassifier=S|UniProt=E9PC60,Q5H9D4,Q9Y5S8|association_with_transcript=4bp_to_ENST00000372957,ENST00000372961,ENST00000372966,NM_007052,NM_013955,uc004egj.2,uc004egl.3,uc010nne.2_5end|coexpression_cluster_id=C201|description=CAGE_peak_3_at_NOX1_5end|id=chrX:100129320..100129329,-|ontology_enrichment_celltype=CL:0000077!1.77e-28!19;CL:0000076!1.41e-09!62;CL:0000213!1.48e-08!57;CL:0000215!1.48e-08!57;CL:0002563!6.26e-08!4|ontology_enrichment_celltype_v019=CL:0000077;1.16e-18;19!CL:0002097;1.61e-08;2!CL:0002253;2.40e-08;2|ontology_enrichment_celltype_v019_2=CL:0000077,9.46e-19,19;CL:0002097,1.61e-08,2;CL:0002253,2.48e-08,2|ontology_enrichment_development_v019=UBERON:0001045;9.98e-16;1!UBERON:0005754;2.21e-15;1!UBERON:0007297;2.40e-08;2|ontology_enrichment_disease=DOID:3112!5.82e-08!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000059!3.49e-23!11;UBERON:0001155!5.24e-20!9;UBERON:0000160!3.77e-15!27;UBERON:0005409!1.77e-14!35;UBERON:0004907!1.69e-13!5;UBERON:0006947!2.71e-10!3;UBERON:0004054!2.71e-10!3;UBERON:0001154!1.22e-08!1;UBERON:0001153!1.22e-08!1;UBERON:0001000!2.33e-08!1;UBERON:0005352!2.33e-08!1;UBERON:0000998!2.50e-08!1;UBERON:0006868!2.50e-08!1;UBERON:0000989!3.57e-08!1;UBERON:0008811!3.57e-08!1;UBERON:0006258!3.57e-08!1;UBERON:0005876!3.57e-08!1;UBERON:0004874!3.57e-08!1;UBERON:0001052!4.74e-08!4;UBERON:0001242!6.26e-08!4;UBERON:0005904!6.26e-08!4;UBERON:0001262!6.26e-08!4;UBERON:0004786!6.26e-08!4;UBERON:0004808!6.26e-08!4;UBERON:0001277!6.26e-08!4|ontology_enrichment_uberon_v019=UBERON:0000059;2.29e-46;11!UBERON:0001155;8.77e-40;9!UBERON:0000160;2.59e-28;17!UBERON:0004907;5.09e-26;5!UBERON:0005409;3.95e-22;22!UBERON:0006947;1.15e-19;3!UBERON:0004054;1.15e-19;3!UBERON:0001154;9.98e-16;1!UBERON:0001153;9.98e-16;1!UBERON:0009854;9.98e-16;1!UBERON:0004921;2.00e-15;33!UBERON:0001000;2.21e-15;1!UBERON:0000998;2.21e-15;1!UBERON:0006868;2.21e-15;1!UBERON:0005352;2.21e-15;1!UBERON:0001052;5.24e-15;4!UBERON:0005904;5.24e-15;4|ontology_enrichment_uberon_v019_2=UBERON:0000059,1.96e-46,11;UBERON:0001155,9.14e-40,9;UBERON:0000160,2.36e-28,17;UBERON:0004907,3.94e-26,5;UBERON:0005409,1.38e-19,25;UBERON:0006947,2.04e-19,3;UBERON:0004054,2.04e-19,3;UBERON:0001154,8.63e-16,1;UBERON:0001153,8.63e-16,1;UBERON:0001045,8.63e-16,1;UBERON:0001000,3.17e-15,1;UBERON:0005352,3.17e-15,1;UBERON:0000998,3.66e-15,1;UBERON:0006868,3.66e-15,1;UBERON:0001052,4.55e-15,4;UBERON:0005904,8.02e-15,4;UBERON:0001046,3.29e-12,19;UBERON:0004921,6.06e-07,118|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,1.74306691720059,4.1988656296464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21027132424918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69623685720729,0,12.9384051040206,2.0345239835768,9.77648231893801,0,0,0,0,0,0,0,0,0,1.57833761139756,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,2.14441591374926,0.521988583930423,0,0,0,0,1.85280868296583,0.877136198314828,0,1.73622634443823,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@NOX1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=27035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7889 | |||
|TSSclassifier=S | |||
|UniProt=E9PC60,Q5H9D4,Q9Y5S8 | |||
|association_with_transcript=4bp_to_ENST00000372957,ENST00000372961,ENST00000372966,NM_007052,NM_013955,uc004egj.2,uc004egl.3,uc010nne.2_5end | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_3_at_NOX1_5end | |||
|id=chrX:100129320..100129329,- | |||
|ontology_enrichment_celltype=CL:0000077!1.77e-28!19;CL:0000076!1.41e-09!62;CL:0000213!1.48e-08!57;CL:0000215!1.48e-08!57;CL:0002563!6.26e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.16e-18;19!CL:0002097;1.61e-08;2!CL:0002253;2.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,9.46e-19,19;CL:0002097,1.61e-08,2;CL:0002253,2.48e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;9.98e-16;1!UBERON:0005754;2.21e-15;1!UBERON:0007297;2.40e-08;2 | |||
|ontology_enrichment_disease=DOID:3112!5.82e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!3.49e-23!11;UBERON:0001155!5.24e-20!9;UBERON:0000160!3.77e-15!27;UBERON:0005409!1.77e-14!35;UBERON:0004907!1.69e-13!5;UBERON:0006947!2.71e-10!3;UBERON:0004054!2.71e-10!3;UBERON:0001154!1.22e-08!1;UBERON:0001153!1.22e-08!1;UBERON:0001000!2.33e-08!1;UBERON:0005352!2.33e-08!1;UBERON:0000998!2.50e-08!1;UBERON:0006868!2.50e-08!1;UBERON:0000989!3.57e-08!1;UBERON:0008811!3.57e-08!1;UBERON:0006258!3.57e-08!1;UBERON:0005876!3.57e-08!1;UBERON:0004874!3.57e-08!1;UBERON:0001052!4.74e-08!4;UBERON:0001242!6.26e-08!4;UBERON:0005904!6.26e-08!4;UBERON:0001262!6.26e-08!4;UBERON:0004786!6.26e-08!4;UBERON:0004808!6.26e-08!4;UBERON:0001277!6.26e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000059;2.29e-46;11!UBERON:0001155;8.77e-40;9!UBERON:0000160;2.59e-28;17!UBERON:0004907;5.09e-26;5!UBERON:0005409;3.95e-22;22!UBERON:0006947;1.15e-19;3!UBERON:0004054;1.15e-19;3!UBERON:0001154;9.98e-16;1!UBERON:0001153;9.98e-16;1!UBERON:0009854;9.98e-16;1!UBERON:0004921;2.00e-15;33!UBERON:0001000;2.21e-15;1!UBERON:0000998;2.21e-15;1!UBERON:0006868;2.21e-15;1!UBERON:0005352;2.21e-15;1!UBERON:0001052;5.24e-15;4!UBERON:0005904;5.24e-15;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,1.96e-46,11;UBERON:0001155,9.14e-40,9;UBERON:0000160,2.36e-28,17;UBERON:0004907,3.94e-26,5;UBERON:0005409,1.38e-19,25;UBERON:0006947,2.04e-19,3;UBERON:0004054,2.04e-19,3;UBERON:0001154,8.63e-16,1;UBERON:0001153,8.63e-16,1;UBERON:0001045,8.63e-16,1;UBERON:0001000,3.17e-15,1;UBERON:0005352,3.17e-15,1;UBERON:0000998,3.66e-15,1;UBERON:0006868,3.66e-15,1;UBERON:0001052,4.55e-15,4;UBERON:0005904,8.02e-15,4;UBERON:0001046,3.29e-12,19;UBERON:0004921,6.06e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,1.74306691720059,4.1988656296464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21027132424918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69623685720729,0,12.9384051040206,2.0345239835768,9.77648231893801,0,0,0,0,0,0,0,0,0,1.57833761139756,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,2.14441591374926,0.521988583930423,0,0,0,0,1.85280868296583,0.877136198314828,0,1.73622634443823,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@NOX1 | |||
}} |
Revision as of 10:06, 14 September 2013
Short description: | p3@NOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NOX1_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | 4bp_to_ENST00000372957, ENST00000372961, ENST00000372966, NM_007052, NM_013955, uc004egj.2, uc004egl.3, uc010nne.2_5end |
EntrezGene: | NOX1 |
HGNC: | 7889 |
UniProt: | E9PC60Q5H9D4Q9Y5S8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 9.46e-19 | 19 |
cortical cell of adrenal gland | 1.61e-08 | 2 |
epithelial cell of large intestine | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
large intestine | 1.96e-46 | 11 |
colon | 9.14e-40 | 9 |
intestine | 2.36e-28 | 17 |
lower digestive tract | 3.94e-26 | 5 |
gastrointestinal system | 1.38e-19 | 25 |
male genital duct | 2.04e-19 | 3 |
internal male genitalia | 2.04e-19 | 3 |
vermiform appendix | 8.63e-16 | 1 |
caecum | 8.63e-16 | 1 |
midgut | 8.63e-16 | 1 |
vas deferens | 3.17e-15 | 1 |
spermatic cord | 3.17e-15 | 1 |
seminal vesicle | 3.66e-15 | 1 |
seminal fluid secreting gland | 3.66e-15 | 1 |
rectum | 4.55e-15 | 4 |
duct of male reproductive system | 8.02e-15 | 4 |
hindgut | 3.29e-12 | 19 |
subdivision of digestive tract | 6.06e-07 | 118 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.