FFCP PHASE1:Hg19::chrX:67332313..67332323,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4983|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8148|TSSclassifier=S|UniProt=|association_with_transcript=-49bp_to_ENST00000484842_5end|coexpression_cluster_id=C206|description=CAGE_peak_17_at_OPHN1_5end|id=chrX:67332313..67332323,-|ontology_enrichment_celltype=CL:0000147!6.05e-09!14;CL:0000148!6.86e-09!10;CL:0000541!6.86e-09!10|ontology_enrichment_celltype_v019=CL:0000047;5.69e-21;2!CL:0002605;1.83e-14;3!CL:0000128;6.04e-07;7!CL:0000126;6.04e-07;7!CL:0000127;6.04e-07;7!CL:0002319;7.45e-07;25|ontology_enrichment_celltype_v019_2=CL:0002605,2.09e-14,3;CL:0000128,6.39e-07,7;CL:0000126,6.39e-07,7;CL:0000127,6.39e-07,7;CL:0002453,6.39e-07,7;CL:0002319,7.45e-07,25|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3|ontology_enrichment_disease=DOID:1909!3.24e-09!2|ontology_enrichment_disease_v019=DOID:1909;3.11e-21;2|ontology_enrichment_disease_v019_2=DOID:1909,3.11e-21,2|ontology_enrichment_uberon=UBERON:0001893!2.11e-27!34;UBERON:0001869!1.01e-25!32;UBERON:0000956!2.09e-25!25;UBERON:0000203!2.09e-25!25;UBERON:0002791!8.33e-25!33;UBERON:0002780!3.94e-22!41;UBERON:0001890!3.94e-22!41;UBERON:0006240!3.94e-22!41;UBERON:0003080!1.61e-21!42;UBERON:0002619!4.82e-21!22;UBERON:0005743!6.78e-21!86;UBERON:0002020!7.56e-21!34;UBERON:0003528!7.56e-21!34;UBERON:0003056!9.03e-20!61;UBERON:0001950!1.28e-19!20;UBERON:0003075!3.13e-19!86;UBERON:0007284!3.13e-19!86;UBERON:0000073!2.24e-18!94;UBERON:0001016!2.24e-18!94;UBERON:0001017!3.54e-18!82;UBERON:0002346!4.02e-18!90;UBERON:0007023!3.13e-17!115;UBERON:0001049!6.97e-15!57;UBERON:0005068!6.97e-15!57;UBERON:0006241!6.97e-15!57;UBERON:0007135!6.97e-15!57;UBERON:0002616!2.98e-14!59;UBERON:0000955!4.67e-13!69;UBERON:0006238!4.67e-13!69;UBERON:0004121!9.99e-13!169;UBERON:0000924!2.83e-12!173;UBERON:0006601!2.83e-12!173;UBERON:0002021!2.84e-12!5;UBERON:0000200!9.82e-11!6;UBERON:0000033!2.04e-08!123;UBERON:0002360!4.71e-08!2;UBERON:0000094!4.71e-08!2;UBERON:0007645!4.71e-08!2;UBERON:0000153!8.16e-08!129;UBERON:0007811!8.16e-08!129|ontology_enrichment_uberon_v019=UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0002021;3.22e-09;5!UBERON:0000956;4.41e-07;25!UBERON:0000203;4.41e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.22e-09,5;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0000956,4.55e-07,25;UBERON:0000203,4.55e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.471807930864739,0,0,0,0,0.485560759068186,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0.832048038078832,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0.454947352624943,6.28023733798928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0.319267718114302,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.675375846183947,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0.394636641377094,0,0.111231401892069,0,0,0,0,0,0,3.28792103212619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0.339957450954573,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8148 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-49bp_to_ENST00000484842_5end | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_17_at_OPHN1_5end | |||
|id=chrX:67332313..67332323,- | |||
|ontology_enrichment_celltype=CL:0000147!6.05e-09!14;CL:0000148!6.86e-09!10;CL:0000541!6.86e-09!10 | |||
|ontology_enrichment_celltype_v019=CL:0000047;5.69e-21;2!CL:0002605;1.83e-14;3!CL:0000128;6.04e-07;7!CL:0000126;6.04e-07;7!CL:0000127;6.04e-07;7!CL:0002319;7.45e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.09e-14,3;CL:0000128,6.39e-07,7;CL:0000126,6.39e-07,7;CL:0000127,6.39e-07,7;CL:0002453,6.39e-07,7;CL:0002319,7.45e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3 | |||
|ontology_enrichment_disease=DOID:1909!3.24e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.11e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.11e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0001893!2.11e-27!34;UBERON:0001869!1.01e-25!32;UBERON:0000956!2.09e-25!25;UBERON:0000203!2.09e-25!25;UBERON:0002791!8.33e-25!33;UBERON:0002780!3.94e-22!41;UBERON:0001890!3.94e-22!41;UBERON:0006240!3.94e-22!41;UBERON:0003080!1.61e-21!42;UBERON:0002619!4.82e-21!22;UBERON:0005743!6.78e-21!86;UBERON:0002020!7.56e-21!34;UBERON:0003528!7.56e-21!34;UBERON:0003056!9.03e-20!61;UBERON:0001950!1.28e-19!20;UBERON:0003075!3.13e-19!86;UBERON:0007284!3.13e-19!86;UBERON:0000073!2.24e-18!94;UBERON:0001016!2.24e-18!94;UBERON:0001017!3.54e-18!82;UBERON:0002346!4.02e-18!90;UBERON:0007023!3.13e-17!115;UBERON:0001049!6.97e-15!57;UBERON:0005068!6.97e-15!57;UBERON:0006241!6.97e-15!57;UBERON:0007135!6.97e-15!57;UBERON:0002616!2.98e-14!59;UBERON:0000955!4.67e-13!69;UBERON:0006238!4.67e-13!69;UBERON:0004121!9.99e-13!169;UBERON:0000924!2.83e-12!173;UBERON:0006601!2.83e-12!173;UBERON:0002021!2.84e-12!5;UBERON:0000200!9.82e-11!6;UBERON:0000033!2.04e-08!123;UBERON:0002360!4.71e-08!2;UBERON:0000094!4.71e-08!2;UBERON:0007645!4.71e-08!2;UBERON:0000153!8.16e-08!129;UBERON:0007811!8.16e-08!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0002021;3.22e-09;5!UBERON:0000956;4.41e-07;25!UBERON:0000203;4.41e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.22e-09,5;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0000956,4.55e-07,25;UBERON:0000203,4.55e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.471807930864739,0,0,0,0,0.485560759068186,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0.832048038078832,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0.454947352624943,6.28023733798928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0.319267718114302,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.675375846183947,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0.394636641377094,0,0.111231401892069,0,0,0,0,0,0,3.28792103212619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p17@OPHN1 | |||
}} |
Revision as of 12:22, 14 September 2013
Short description: | p17@OPHN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_OPHN1_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | -49bp_to_ENST00000484842_5end |
EntrezGene: | OPHN1 |
HGNC: | 8148 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.09e-14 | 3 |
oligodendrocyte | 6.39e-07 | 7 |
macroglial cell | 6.39e-07 | 7 |
astrocyte | 6.39e-07 | 7 |
oligodendrocyte precursor cell | 6.39e-07 | 7 |
neural cell | 7.45e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.22e-09 | 5 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
cerebral cortex | 4.55e-07 | 25 |
pallium | 4.55e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.11e-21 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.