FFCP PHASE1:Mm9::chr9:13632152..13632225,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72826|HGNC=|MCL_coexpression_id=3104|UniProt=Q80XP8,D6RG49,A6X915|association_with_transcript=0bp_to_ENSMUST00000059579,ENSMUST00000129861,ENSMUST00000156680,NM_176836,uc009oef.1,uc009oeg.1_5end|description=CAGE_peak_1_at_Fam76b_5end|id=chr9:13632152..13632225,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!2.27e-09!41;UBERON:0001004!4.73e-09!42;UBERON:0004177!1.08e-08!29;UBERON:0002390!5.69e-08!45;UBERON:0003061!5.69e-08!45;UBERON:0002193!1.68e-07!48;UBERON:0002370!6.37e-07!23;UBERON:0000974!6.37e-07!23;UBERON:0004807!6.37e-07!23;UBERON:0005058!6.37e-07!23;UBERON:0003351!6.37e-07!23;UBERON:0009113!6.37e-07!23;UBERON:0003295!6.37e-07!23;UBERON:0009722!6.37e-07!23;UBERON:0005562!6.37e-07!23;UBERON:0007690!6.37e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000065,2.27e-09,41;UBERON:0001004,4.73e-09,42;UBERON:0004177,1.08e-08,29;UBERON:0005057,1.08e-08,29;UBERON:0000077,1.53e-08,35;UBERON:0002390,5.69e-08,45;UBERON:0003061,5.69e-08,45;UBERON:0002193,1.68e-07,48;UBERON:0002405,1.68e-07,48;UBERON:0007811,4.37e-07,36;UBERON:0002370,6.37e-07,23;UBERON:0000974,6.37e-07,23;UBERON:0004807,6.37e-07,23;UBERON:0005058,6.37e-07,23;UBERON:0003351,6.37e-07,23;UBERON:0009113,6.37e-07,23;UBERON:0003295,6.37e-07,23;UBERON:0009722,6.37e-07,23;UBERON:0005562,6.37e-07,23;UBERON:0007690,6.37e-07,23|phase1_expression=28.3463459375485,24.4282785347553,23.2049612088663,26.9193148063079,34.561805366298,29.3788725845807,24.7629399031257,59.5258521065667,16.04991432529,12.4054198950657,27.2236569478553,25.4473187195123,61.9746642350965,57.3477839868623,40.9725007033265,43.7346577562024,48.2697695908421,63.5656263196849,64.7180126619087,61.9608891625124,17.7740476415736,41.4043266507692,37.0903700577288,17.9191513528615,18.5821517664408,17.8011908875656,16.7997178502039,19.6078821744159,16.5320374927045,21.4225610295941,16.4080577884925,24.131165591466,29.5231098040594,0,30.9071233133864,21.4442692512455,28.3795405204693,41.8531630736908,40.6294379152376,42.9289470058515,34.1174263057988,47.8131839470912,41.7538903606792,15.3594117930204,17.335455238537,19.4559557291382,8.60630478782843,5.45062890951116,3.95435128922049,6.22175677037707,5.31948402176378,4.31257693094915,64.4285207261708,48.5992635147601,46.7170380808025,14.1492689819771,22.349608315223,19.5955395065428,17.601532094785,13.2247744818008,15.8457850876545,5.42151251310611,2.66788438833342,15.2982951937838,9.88866362566974,15.6305625288142,5.09320187881288,5.76327457982332,26.5445407509703,17.1457541681247,22.9254207873006,10.2834354385369,7.73039893330647,23.6407242484861,17.7314121383737,12.8690630125403,7.70811166995721,14.4286692036262,11.8277030607307,15.1669230889723,16.0103376304217,20.8365348222704,7.53794097303729,8.4414391504752,11.4598685832608,18.2669722993674,19.6472919502762,19.9447407033072,20.143167426627,24.7119001549189,29.5661778475711,21.5105969245347,8.15965600449301,7.01614149129162,7.79731700937203,11.2006721774334,14.4657752735704,16.3613109674935,9.61208217030615,15.546941278455,27.1827800168993,38.4979432242953,50.9610479413291,35.5533351576666,23.5975234702223,22.2956681618087,23.25412447068,20.4389144697117,97.1017063676894,30.7275227864187,15.7871647357184,16.4411358288556,19.602317266765,20.0461111934988,38.9218620619183,22.4943198480119,24.7194967734374,24.581890676385,35.384422077995,29.6033335403759,35.1138014352026,40.2446460102234,27.9587641827183,34.8409148443741,31.2075593152048,24.2684202448162,40.0182515849774,32.394747473644,36.5962253970426,15.1288545798871,21.0450277296568,36.4397621127307,16.5133104182663,26.0829766476937,12.259494629014,15.7374025175725,37.8842433523177,41.0543003013307,21.734157225296,23.990371571058,22.380716189585,27.5882525320167,24.8485739131382,31.7987165633359,58.4433527709906,43.6867786171338,37.1995846502123,26.9051505568576,20.9100953144857,24.9620025821521,24.4572062587889,24.3307262994608,27.8047249225598,30.6461906539507,29.01528123352,20.6995637491233,27.3863143052162,26.2494865257009,24.1538974486254,18.2270679831242,22.2799756982041,19.2666405763286,22.490749880595,24.2020005049307,19.591923336697,21.8581908065383,19.047411499373,30.1254583307297,24.3548577871951,20.5209330098869,31.2925604847003,19.1521983527185,21.9550115291051,28.4517607771988,20.1878350621562,35.6049958832324,18.1730330641089,17.982638533121,23.0351310578053,23.4559038579043,31.5725280239129,25.8154911517878,21.7930482967973,22.0661726290569,20.8792787079585,20.9167672499494,26.8928673416288,25.2674719492262,23.7856186285327,30.5598598942435,19.8847005884719,26.6849306160852,17.2597789867304,23.9921876480431,22.5415471346161,25.0491133249736,25.6017283061266,38.2941576601139,31.6815050992529,22.5843526408791,21.9798218977925,18.2627802604265,11.2651998293117,26.3615267031429,25.5526693647164,21.1370385641763,27.5889765088364,30.3883221288045,24.9533334745791,21.5772103088108,33.5619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| ||
|EntrezGene=72826 | |||
|HGNC= | |||
|MCL_coexpression_id=3104 | |||
|UniProt=Q80XP8,D6RG49,A6X915 | |||
|association_with_transcript=0bp_to_ENSMUST00000059579,ENSMUST00000129861,ENSMUST00000156680,NM_176836,uc009oef.1,uc009oeg.1_5end | |||
|description=CAGE_peak_1_at_Fam76b_5end | |||
|id=chr9:13632152..13632225,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!2.27e-09!41;UBERON:0001004!4.73e-09!42;UBERON:0004177!1.08e-08!29;UBERON:0002390!5.69e-08!45;UBERON:0003061!5.69e-08!45;UBERON:0002193!1.68e-07!48;UBERON:0002370!6.37e-07!23;UBERON:0000974!6.37e-07!23;UBERON:0004807!6.37e-07!23;UBERON:0005058!6.37e-07!23;UBERON:0003351!6.37e-07!23;UBERON:0009113!6.37e-07!23;UBERON:0003295!6.37e-07!23;UBERON:0009722!6.37e-07!23;UBERON:0005562!6.37e-07!23;UBERON:0007690!6.37e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,2.27e-09,41;UBERON:0001004,4.73e-09,42;UBERON:0004177,1.08e-08,29;UBERON:0005057,1.08e-08,29;UBERON:0000077,1.53e-08,35;UBERON:0002390,5.69e-08,45;UBERON:0003061,5.69e-08,45;UBERON:0002193,1.68e-07,48;UBERON:0002405,1.68e-07,48;UBERON:0007811,4.37e-07,36;UBERON:0002370,6.37e-07,23;UBERON:0000974,6.37e-07,23;UBERON:0004807,6.37e-07,23;UBERON:0005058,6.37e-07,23;UBERON:0003351,6.37e-07,23;UBERON:0009113,6.37e-07,23;UBERON:0003295,6.37e-07,23;UBERON:0009722,6.37e-07,23;UBERON:0005562,6.37e-07,23;UBERON:0007690,6.37e-07,23 | |||
|phase1_expression=28.3463459375485,24.4282785347553,23.2049612088663,26.9193148063079,34.561805366298,29.3788725845807,24.7629399031257,59.5258521065667,16.04991432529,12.4054198950657,27.2236569478553,25.4473187195123,61.9746642350965,57.3477839868623,40.9725007033265,43.7346577562024,48.2697695908421,63.5656263196849,64.7180126619087,61.9608891625124,17.7740476415736,41.4043266507692,37.0903700577288,17.9191513528615,18.5821517664408,17.8011908875656,16.7997178502039,19.6078821744159,16.5320374927045,21.4225610295941,16.4080577884925,24.131165591466,29.5231098040594,0,30.9071233133864,21.4442692512455,28.3795405204693,41.8531630736908,40.6294379152376,42.9289470058515,34.1174263057988,47.8131839470912,41.7538903606792,15.3594117930204,17.335455238537,19.4559557291382,8.60630478782843,5.45062890951116,3.95435128922049,6.22175677037707,5.31948402176378,4.31257693094915,64.4285207261708,48.5992635147601,46.7170380808025,14.1492689819771,22.349608315223,19.5955395065428,17.601532094785,13.2247744818008,15.8457850876545,5.42151251310611,2.66788438833342,15.2982951937838,9.88866362566974,15.6305625288142,5.09320187881288,5.76327457982332,26.5445407509703,17.1457541681247,22.9254207873006,10.2834354385369,7.73039893330647,23.6407242484861,17.7314121383737,12.8690630125403,7.70811166995721,14.4286692036262,11.8277030607307,15.1669230889723,16.0103376304217,20.8365348222704,7.53794097303729,8.4414391504752,11.4598685832608,18.2669722993674,19.6472919502762,19.9447407033072,20.143167426627,24.7119001549189,29.5661778475711,21.5105969245347,8.15965600449301,7.01614149129162,7.79731700937203,11.2006721774334,14.4657752735704,16.3613109674935,9.61208217030615,15.546941278455,27.1827800168993,38.4979432242953,50.9610479413291,35.5533351576666,23.5975234702223,22.2956681618087,23.25412447068,20.4389144697117,97.1017063676894,30.7275227864187,15.7871647357184,16.4411358288556,19.602317266765,20.0461111934988,38.9218620619183,22.4943198480119,24.7194967734374,24.581890676385,35.384422077995,29.6033335403759,35.1138014352026,40.2446460102234,27.9587641827183,34.8409148443741,31.2075593152048,24.2684202448162,40.0182515849774,32.394747473644,36.5962253970426,15.1288545798871,21.0450277296568,36.4397621127307,16.5133104182663,26.0829766476937,12.259494629014,15.7374025175725,37.8842433523177,41.0543003013307,21.734157225296,23.990371571058,22.380716189585,27.5882525320167,24.8485739131382,31.7987165633359,58.4433527709906,43.6867786171338,37.1995846502123,26.9051505568576,20.9100953144857,24.9620025821521,24.4572062587889,24.3307262994608,27.8047249225598,30.6461906539507,29.01528123352,20.6995637491233,27.3863143052162,26.2494865257009,24.1538974486254,18.2270679831242,22.2799756982041,19.2666405763286,22.490749880595,24.2020005049307,19.591923336697,21.8581908065383,19.047411499373,30.1254583307297,24.3548577871951,20.5209330098869,31.2925604847003,19.1521983527185,21.9550115291051,28.4517607771988,20.1878350621562,35.6049958832324,18.1730330641089,17.982638533121,23.0351310578053,23.4559038579043,31.5725280239129,25.8154911517878,21.7930482967973,22.0661726290569,20.8792787079585,20.9167672499494,26.8928673416288,25.2674719492262,23.7856186285327,30.5598598942435,19.8847005884719,26.6849306160852,17.2597789867304,23.9921876480431,22.5415471346161,25.0491133249736,25.6017283061266,38.2941576601139,31.6815050992529,22.5843526408791,21.9798218977925,18.2627802604265,11.2651998293117,26.3615267031429,25.5526693647164,21.1370385641763,27.5889765088364,30.3883221288045,24.9533334745791,21.5772103088108,33.5619919424323,20.0429831627299,31.629005436018,26.0498663367952,23.402825483592,19.4485736019276,17.9397413521912,23.639732546805,37.6896507939874,22.3599865889172,25.9114312542821,29.0264096675572,33.3260152569673,36.5163641223158,35.4685024920161,44.2953380637203,45.2412863584768,42.7426851022136,51.8227998136833,35.8860659227466,34.1916264094473,43.539366633035,39.2057338242108,30.4587182938477,23.6046851049137,28.6974216156922,16.215609588767,18.8710815413447,12.2951209032507,21.9649706667804,29.6577726251281,25.7689571235781,29.7284288871263,27.2424429665909,27.1814382380521,37.3661020641259,23.4790206971439,26.0107713541068,23.7172666767914,25.3843839973228,25.8330955079049,13.5329858787114,41.6990615945155,26.8901300445233,27.8764790513922,19.9080121647085,16.0231485191318,18.8605079755898,13.8791889653963,22.7502009478506,31.0113951801865,28.3556308992454,24.5983191085458,30.3395287618383,33.7339547439996,27.8465966770104,24.1712120085189,25.3886142584147,12.4184336431444,22.5053886783172,21.6355085043574,13.9127677729615,21.8850197400821,16.745572201303,25.8138878870081,25.6316805745222,24.2581237860458,36.6047481530086,53.4447252363447,40.8921631012897,34.976096792919,34.1413071469727,24.7758711135373,17.2445530869774,37.7624646563254,26.6239059672557,30.7422915433721,39.1806390569757,47.1595085637537,40.0361803111415,44.3643702283962,44.5045618389232,44.9149914864377,15.2747298882418,23.2506955282134,24.60165552234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| |||
|short_description=p1@Fam76b | |||
}} | |||
Revision as of 17:19, 14 September 2013
| Short description: | p1@Fam76b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Fam76b_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3104 |
| Association with transcript: | 0bp_to_ENSMUST00000059579, ENSMUST00000129861, ENSMUST00000156680, NM_176836, uc009oef.1, uc009oeg.1_5end |
| EntrezGene: | Fam76b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| respiratory tract | 2.27e-09 | 41 |
| respiratory system | 4.73e-09 | 42 |
| hemopoietic organ | 1.08e-08 | 29 |
| immune organ | 1.08e-08 | 29 |
| mixed endoderm/mesoderm-derived structure | 1.53e-08 | 35 |
| hematopoietic system | 5.69e-08 | 45 |
| blood island | 5.69e-08 | 45 |
| hemolymphoid system | 1.68e-07 | 48 |
| immune system | 1.68e-07 | 48 |
| craniocervical region | 4.37e-07 | 36 |
| thymus | 6.37e-07 | 23 |
| neck | 6.37e-07 | 23 |
| respiratory system epithelium | 6.37e-07 | 23 |
| hemolymphoid system gland | 6.37e-07 | 23 |
| pharyngeal epithelium | 6.37e-07 | 23 |
| thymic region | 6.37e-07 | 23 |
| pharyngeal gland | 6.37e-07 | 23 |
| entire pharyngeal arch endoderm | 6.37e-07 | 23 |
| thymus primordium | 6.37e-07 | 23 |
| early pharyngeal endoderm | 6.37e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
