FFCP PHASE1:Mm9::chr9:24577622..24577626,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=19|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:24577622..24577626,-|id=chr9:24577622..24577626,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,2.32e-10,3;CL:0000737,2.32e-10,3;CL:0000746,2.32e-10,3;CL:0000513,2.32e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!3.17e-20!18;UBERON:0000948!3.17e-20!18;UBERON:0005498!3.17e-20!18;UBERON:0004140!3.17e-20!18;UBERON:0009881!3.17e-20!18;UBERON:0004141!3.17e-20!18;UBERON:0003084!3.17e-20!18;UBERON:0007005!3.17e-20!18;UBERON:0004139!3.17e-20!18;UBERON:0004291!3.17e-20!18;UBERON:0003914!1.50e-17!47;UBERON:0004535!6.59e-16!23;UBERON:0001009!6.59e-16!23;UBERON:0004872!5.42e-12!33;UBERON:0001048!8.38e-10!147;UBERON:0005256!1.26e-07!47;UBERON:0000926!5.74e-07!193;UBERON:0004120!5.74e-07!193;UBERON:0006603!5.74e-07!193;UBERON:0002369!6.13e-07!7;UBERON:0006858!6.13e-07!7;UBERON:0000483!8.27e-07!181|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.30e-56,18;UBERON:0000948,4.30e-56,18;UBERON:0005498,4.30e-56,18;UBERON:0004140,4.30e-56,18;UBERON:0009881,4.30e-56,18;UBERON:0004141,4.30e-56,18;UBERON:0003084,4.30e-56,18;UBERON:0007005,4.30e-56,18;UBERON:0004139,4.30e-56,18;UBERON:0004291,4.30e-56,18;UBERON:0004535,4.35e-43,23;UBERON:0001009,4.35e-43,23;UBERON:0004872,3.83e-32,33;UBERON:0003914,5.98e-29,47;UBERON:0003103,8.72e-24,43;UBERON:0010314,1.17e-12,92;UBERON:0000926,5.97e-12,120;UBERON:0004120,5.97e-12,120;UBERON:0006603,5.97e-12,120;UBERON:0003081,5.89e-11,87;UBERON:0004111,2.08e-09,122;UBERON:0000025,2.65e-09,114;UBERON:0001048,3.06e-07,134;UBERON:0005256,3.16e-07,45;UBERON:0002369,8.67e-07,7;UBERON:0006858,8.67e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.26133969729409,16.0458726365704,6.18806510732931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,1.72084775396277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.890652834388949,1.21439728736295,1.82679286987285,2.30615497256059,0.301445281105245,1.99900802130698,0.376999773989026,2.71914464507811,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0.910843100738926,0.229902104433473,0,0.452114453507145,0.476255494059295,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,13.8774267598786,14.3060896588469,13.6847166710371,14.678173606283,19.0861304794982,17.7407179820485,13.7195027402741,13.413670069981,20.667465598989,22.0510198884064,14.2825693748813,7.37726166867287,8.33339928324394,6.14740322814942,5.09984391289413,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610953983535943,0,0,0,0,0,0,0.592905254174298,1.00107063429656,0.393117990226406,0.224862112384854,0,0,0,0.575392274901621,0.324270453550071,0.274561413188081,2.87536413054709,0,0.936113019343682,1.01031551178845,0.179397413521912,0.964887042726734,0,0.757965647081939,0.162964976442026,0.848725428875941,0.234690248288502,0.335012514883631,0.714130922658041,0.780534591431195,0.788175720530955,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0.214337035031592,0,0,0,0,0.23467170806371,1.27099242518292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0.288030006257865,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0.221985953374065,0,0.335769232728157,1.9318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0.44449345560323,0.412070114477788,0,0.505394423527595,0,0.565879024158229,0.187283014939765,0.128050304809739,0.287177344778066,0,0.347652977834566,0,0,0.294397840268795,0.685738504770831,0,0,0.290692833264657,0.0941093804153306,0,0,0,0,0,0.237270036248348,0.197008964751127,0,0,0.385813221962283,0,0,0.644613162144895,0.191288332068843,0,0|short_description=p@chr9:24577622..24577626,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:24577622..24577626,- | |||
|id=chr9:24577622..24577626,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.32e-10,3;CL:0000737,2.32e-10,3;CL:0000746,2.32e-10,3;CL:0000513,2.32e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.17e-20!18;UBERON:0000948!3.17e-20!18;UBERON:0005498!3.17e-20!18;UBERON:0004140!3.17e-20!18;UBERON:0009881!3.17e-20!18;UBERON:0004141!3.17e-20!18;UBERON:0003084!3.17e-20!18;UBERON:0007005!3.17e-20!18;UBERON:0004139!3.17e-20!18;UBERON:0004291!3.17e-20!18;UBERON:0003914!1.50e-17!47;UBERON:0004535!6.59e-16!23;UBERON:0001009!6.59e-16!23;UBERON:0004872!5.42e-12!33;UBERON:0001048!8.38e-10!147;UBERON:0005256!1.26e-07!47;UBERON:0000926!5.74e-07!193;UBERON:0004120!5.74e-07!193;UBERON:0006603!5.74e-07!193;UBERON:0002369!6.13e-07!7;UBERON:0006858!6.13e-07!7;UBERON:0000483!8.27e-07!181 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.30e-56,18;UBERON:0000948,4.30e-56,18;UBERON:0005498,4.30e-56,18;UBERON:0004140,4.30e-56,18;UBERON:0009881,4.30e-56,18;UBERON:0004141,4.30e-56,18;UBERON:0003084,4.30e-56,18;UBERON:0007005,4.30e-56,18;UBERON:0004139,4.30e-56,18;UBERON:0004291,4.30e-56,18;UBERON:0004535,4.35e-43,23;UBERON:0001009,4.35e-43,23;UBERON:0004872,3.83e-32,33;UBERON:0003914,5.98e-29,47;UBERON:0003103,8.72e-24,43;UBERON:0010314,1.17e-12,92;UBERON:0000926,5.97e-12,120;UBERON:0004120,5.97e-12,120;UBERON:0006603,5.97e-12,120;UBERON:0003081,5.89e-11,87;UBERON:0004111,2.08e-09,122;UBERON:0000025,2.65e-09,114;UBERON:0001048,3.06e-07,134;UBERON:0005256,3.16e-07,45;UBERON:0002369,8.67e-07,7;UBERON:0006858,8.67e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.26133969729409,16.0458726365704,6.18806510732931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,1.72084775396277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.890652834388949,1.21439728736295,1.82679286987285,2.30615497256059,0.301445281105245,1.99900802130698,0.376999773989026,2.71914464507811,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0.910843100738926,0.229902104433473,0,0.452114453507145,0.476255494059295,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,13.8774267598786,14.3060896588469,13.6847166710371,14.678173606283,19.0861304794982,17.7407179820485,13.7195027402741,13.413670069981,20.667465598989,22.0510198884064,14.2825693748813,7.37726166867287,8.33339928324394,6.14740322814942,5.09984391289413,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610953983535943,0,0,0,0,0,0,0.592905254174298,1.00107063429656,0.393117990226406,0.224862112384854,0,0,0,0.575392274901621,0.324270453550071,0.274561413188081,2.87536413054709,0,0.936113019343682,1.01031551178845,0.179397413521912,0.964887042726734,0,0.757965647081939,0.162964976442026,0.848725428875941,0.234690248288502,0.335012514883631,0.714130922658041,0.780534591431195,0.788175720530955,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0.214337035031592,0,0,0,0,0.23467170806371,1.27099242518292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0.288030006257865,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0.221985953374065,0,0.335769232728157,1.9318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0.44449345560323,0.412070114477788,0,0.505394423527595,0,0.565879024158229,0.187283014939765,0.128050304809739,0.287177344778066,0,0.347652977834566,0,0,0.294397840268795,0.685738504770831,0,0,0.290692833264657,0.0941093804153306,0,0,0,0,0,0.237270036248348,0.197008964751127,0,0,0.385813221962283,0,0,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p@chr9:24577622..24577626,- | |||
}} |
Revision as of 17:31, 14 September 2013
Short description: | p@chr9:24577622..24577626, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:24577622..24577626, - |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.32e-10 | 3 |
striated muscle cell | 2.32e-10 | 3 |
cardiac muscle cell | 2.32e-10 | 3 |
cardiac muscle myoblast | 2.32e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 4.30e-56 | 18 |
heart | 4.30e-56 | 18 |
primitive heart tube | 4.30e-56 | 18 |
primary heart field | 4.30e-56 | 18 |
anterior lateral plate mesoderm | 4.30e-56 | 18 |
heart tube | 4.30e-56 | 18 |
heart primordium | 4.30e-56 | 18 |
cardiac mesoderm | 4.30e-56 | 18 |
cardiogenic plate | 4.30e-56 | 18 |
heart rudiment | 4.30e-56 | 18 |
cardiovascular system | 4.35e-43 | 23 |
circulatory system | 4.35e-43 | 23 |
splanchnic layer of lateral plate mesoderm | 3.83e-32 | 33 |
epithelial tube | 5.98e-29 | 47 |
compound organ | 8.72e-24 | 43 |
structure with developmental contribution from neural crest | 1.17e-12 | 92 |
mesoderm | 5.97e-12 | 120 |
mesoderm-derived structure | 5.97e-12 | 120 |
presumptive mesoderm | 5.97e-12 | 120 |
lateral plate mesoderm | 5.89e-11 | 87 |
anatomical conduit | 2.08e-09 | 122 |
tube | 2.65e-09 | 114 |
primordium | 3.06e-07 | 134 |
trunk mesenchyme | 3.16e-07 | 45 |
adrenal gland | 8.67e-07 | 7 |
adrenal/interrenal gland | 8.67e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.