FFCP PHASE1:Mm9::chr9:55971061..55971072,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19200|HGNC=|MCL_coexpression_id=3711|UniProt=|association_with_transcript=199bp_to_ENSMUST00000132800,ENSMUST00000142894_5end|description=CAGE_peak_9_at_Pstpip1_5end|id=chr9:55971061..55971072,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!3.94e-08!5;UBERON:0001003!3.94e-08!5;UBERON:0002097!3.94e-08!5;UBERON:0002199!3.94e-08!5;UBERON:0007029!3.94e-08!5;UBERON:0007376!3.94e-08!5;UBERON:0002416!3.94e-08!5;UBERON:0007383!3.94e-08!5|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.40e-12,5;UBERON:0001003,1.40e-12,5;UBERON:0002097,1.40e-12,5;UBERON:0002199,1.40e-12,5;UBERON:0007029,1.40e-12,5;UBERON:0007376,1.40e-12,5;UBERON:0002416,1.40e-12,5;UBERON:0007383,1.40e-12,5;UBERON:0001301,2.68e-10,3;UBERON:0006555,2.68e-10,3;UBERON:0005103,2.68e-10,3;UBERON:0000083,2.68e-10,3;UBERON:0009201,2.68e-10,3;UBERON:0004819,2.68e-10,3;UBERON:0006553,2.68e-10,3;UBERON:0003074,2.68e-10,3;UBERON:0003060,2.68e-10,3;UBERON:0001723,2.54e-08,1;UBERON:0001033,2.54e-08,1;UBERON:0010056,2.54e-08,1;UBERON:0001153,3.50e-08,1;UBERON:0001045,3.50e-08,1;UBERON:0000080,6.11e-08,4;UBERON:0005904,6.11e-08,4;UBERON:0006947,6.11e-08,4;UBERON:0002120,6.11e-08,4;UBERON:0004054,6.11e-08,4;UBERON:0004875,6.11e-08,4;UBERON:0004876,6.11e-08,4;UBERON:0005721,6.11e-08,4;UBERON:0005754,6.11e-08,4;UBERON:0007297,6.11e-08,4;UBERON:0001851,1.05e-07,1;UBERON:0005889,1.05e-07,1;UBERON:0000945,3.35e-07,16;UBERON:0010039,3.35e-07,16|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0.782391344348039,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,0,0,0,0.127070227073065,0,0,0.125654352112864,0.695297280769106,1.02286182932132,0,0,0.101839363850316,3.4833951770826,13.8997517138521,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15420377059036,0.161464426695906,0.603129249281559,1.90995750405018,1.96969079694074,0,0,0,0,0,0,0,0,0,0,0,10.5013767981662,0,0,0.108005340821801,0.627264888043406,0.218362563746178,1.75323650300267,3.80205896336545,4.4498510137285,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0,0,4.0811469050738,0,0,0,0,0,0,0.428736758158132,0,0.564751842617067,0,1.14579102687879,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0|short_description=p9@Pstpip1}} | ||
|EntrezGene=19200 | |||
|HGNC= | |||
|MCL_coexpression_id=3711 | |||
|UniProt= | |||
|association_with_transcript=199bp_to_ENSMUST00000132800,ENSMUST00000142894_5end | |||
|description=CAGE_peak_9_at_Pstpip1_5end | |||
|id=chr9:55971061..55971072,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!3.94e-08!5;UBERON:0001003!3.94e-08!5;UBERON:0002097!3.94e-08!5;UBERON:0002199!3.94e-08!5;UBERON:0007029!3.94e-08!5;UBERON:0007376!3.94e-08!5;UBERON:0002416!3.94e-08!5;UBERON:0007383!3.94e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.40e-12,5;UBERON:0001003,1.40e-12,5;UBERON:0002097,1.40e-12,5;UBERON:0002199,1.40e-12,5;UBERON:0007029,1.40e-12,5;UBERON:0007376,1.40e-12,5;UBERON:0002416,1.40e-12,5;UBERON:0007383,1.40e-12,5;UBERON:0001301,2.68e-10,3;UBERON:0006555,2.68e-10,3;UBERON:0005103,2.68e-10,3;UBERON:0000083,2.68e-10,3;UBERON:0009201,2.68e-10,3;UBERON:0004819,2.68e-10,3;UBERON:0006553,2.68e-10,3;UBERON:0003074,2.68e-10,3;UBERON:0003060,2.68e-10,3;UBERON:0001723,2.54e-08,1;UBERON:0001033,2.54e-08,1;UBERON:0010056,2.54e-08,1;UBERON:0001153,3.50e-08,1;UBERON:0001045,3.50e-08,1;UBERON:0000080,6.11e-08,4;UBERON:0005904,6.11e-08,4;UBERON:0006947,6.11e-08,4;UBERON:0002120,6.11e-08,4;UBERON:0004054,6.11e-08,4;UBERON:0004875,6.11e-08,4;UBERON:0004876,6.11e-08,4;UBERON:0005721,6.11e-08,4;UBERON:0005754,6.11e-08,4;UBERON:0007297,6.11e-08,4;UBERON:0001851,1.05e-07,1;UBERON:0005889,1.05e-07,1;UBERON:0000945,3.35e-07,16;UBERON:0010039,3.35e-07,16 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0.782391344348039,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,0,0,0,0.127070227073065,0,0,0.125654352112864,0.695297280769106,1.02286182932132,0,0,0.101839363850316,3.4833951770826,13.8997517138521,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15420377059036,0.161464426695906,0.603129249281559,1.90995750405018,1.96969079694074,0,0,0,0,0,0,0,0,0,0,0,10.5013767981662,0,0,0.108005340821801,0.627264888043406,0.218362563746178,1.75323650300267,3.80205896336545,4.4498510137285,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0,0,4.0811469050738,0,0,0,0,0,0,0.428736758158132,0,0.564751842617067,0,1.14579102687879,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0 | |||
|short_description=p9@Pstpip1 | |||
}} |
Revision as of 18:16, 14 September 2013
Short description: | p9@Pstpip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Pstpip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3711 |
Association with transcript: | 199bp_to_ENSMUST00000132800, ENSMUST00000142894_5end |
EntrezGene: | Pstpip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.40e-12 | 5 |
skin epidermis | 1.40e-12 | 5 |
skin of body | 1.40e-12 | 5 |
integument | 1.40e-12 | 5 |
surface | 1.40e-12 | 5 |
outer epithelium | 1.40e-12 | 5 |
integumental system | 1.40e-12 | 5 |
enveloping layer of ectoderm | 1.40e-12 | 5 |
epididymis | 2.68e-10 | 3 |
excretory tube | 2.68e-10 | 3 |
mesonephric epithelium | 2.68e-10 | 3 |
mesonephric tubule | 2.68e-10 | 3 |
nephric duct | 2.68e-10 | 3 |
kidney epithelium | 2.68e-10 | 3 |
renal duct | 2.68e-10 | 3 |
mesonephric duct | 2.68e-10 | 3 |
pronephric duct | 2.68e-10 | 3 |
tongue | 2.54e-08 | 1 |
gustatory system | 2.54e-08 | 1 |
future tongue | 2.54e-08 | 1 |
caecum | 3.50e-08 | 1 |
midgut | 3.50e-08 | 1 |
mesonephros | 6.11e-08 | 4 |
duct of male reproductive system | 6.11e-08 | 4 |
male genital duct | 6.11e-08 | 4 |
pronephros | 6.11e-08 | 4 |
internal male genitalia | 6.11e-08 | 4 |
nephrogenic cord | 6.11e-08 | 4 |
urogenital ridge | 6.11e-08 | 4 |
pronephric mesoderm | 6.11e-08 | 4 |
rostral part of nephrogenic cord | 6.11e-08 | 4 |
presumptive pronephric mesoderm | 6.11e-08 | 4 |
cortex | 1.05e-07 | 1 |
zygote cortex | 1.05e-07 | 1 |
stomach | 3.35e-07 | 16 |
food storage organ | 3.35e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.