FFCP PHASE1:Hg19::chr1:150953891..150953894,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_at_chr1:150953891..150953894,+ | |||
|id=chr1:150953891..150953894,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.55e-15!254;CL:0002322!2.45e-11!5;CL:0000223!4.27e-09!59;CL:0002150!1.09e-07!3;CL:0000861!1.09e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002253;9.07e-18;2!CL:0002563;1.44e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.07e-17,2;CL:0002563,1.57e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.59e-26!106;DOID:0050687!2.36e-20!143;DOID:162!7.95e-14!235;DOID:14566!2.85e-13!239;DOID:7!1.87e-12!39;DOID:299!2.40e-12!25;DOID:5093!1.23e-11!4;DOID:1612!1.23e-11!4;DOID:1749!3.18e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.58e-74;4!DOID:1612;2.58e-74;4!DOID:299;1.15e-21;25!DOID:7;2.69e-12;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.56e-74,4;DOID:1612,1.56e-74,4;DOID:299,1.09e-21,25;DOID:7,3.56e-14,39;DOID:305,3.00e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000344!8.61e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;5.05e-34;1!UBERON:0000310;2.27e-30;10!UBERON:0001443;1.07e-27;11!UBERON:0001052;1.44e-09;4!UBERON:0001242;1.44e-09;4!UBERON:0001262;1.44e-09;4!UBERON:0004786;1.44e-09;4!UBERON:0004808;1.44e-09;4!UBERON:0001277;1.44e-09;4!UBERON:0004907;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,9.85e-34,1;UBERON:0000310,1.86e-30,10;UBERON:0001443,8.90e-28,11;UBERON:0001052,1.57e-09,4;UBERON:0001242,1.57e-09,4;UBERON:0001262,1.57e-09,4;UBERON:0004786,1.57e-09,4;UBERON:0004808,1.57e-09,4;UBERON:0001277,1.57e-09,4;UBERON:0004907,7.01e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,5.53143078571493,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0.269605053441981,0,0,0,0,1.11136990144637,0,0,0,1.30213880542617,0.524759999977174,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.760531603454056,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,1.13082457147153,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.978323094660449,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0.694238953340524,0,0.174118413160805,0,0,0.19351266257817,0.146178634172371,0.246346371159628,0,0,0,0,0,0,0,0.0801588202515337,0,0,0.288180834308212,0,0,0,0,0.471388069233591,0.815425236441684,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3393140992228,0.741742725430498,0.808842526250219,0.0984274815147488,0,0,0,0.482259445395058,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.490738592505128,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0.431855182437243,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0.4582137370881,0,0,0.111855431797792,0,0.609589624911347,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.218531143927391,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:150953891..150953894,+ | |||
}} |
Revision as of 20:45, 10 January 2014
Short description: | p@chr1:150953891..150953894, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:150953891..150953894, + |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.07e-17 | 2 |
intestinal epithelial cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 9.85e-34 | 1 |
breast | 1.86e-30 | 10 |
chest | 8.90e-28 | 11 |
rectum | 1.57e-09 | 4 |
intestinal mucosa | 1.57e-09 | 4 |
wall of intestine | 1.57e-09 | 4 |
gastrointestinal system mucosa | 1.57e-09 | 4 |
gastrointestinal system epithelium | 1.57e-09 | 4 |
intestinal epithelium | 1.57e-09 | 4 |
lower digestive tract | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.56e-74 | 4 |
breast cancer | 1.56e-74 | 4 |
adenocarcinoma | 1.09e-21 | 25 |
disease of anatomical entity | 3.56e-14 | 39 |
carcinoma | 3.00e-08 | 106 |