FFCP PHASE1:Hg19::chr1:151811365..151811395,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:151811365..151811395,+ | |||
|id=chr1:151811365..151811395,+ | |||
|ontology_enrichment_celltype=CL:0000084!7.16e-11!25;CL:0000827!7.16e-11!25;CL:0000791!7.01e-09!18;CL:0000789!7.01e-09!18;CL:0002420!7.01e-09!18;CL:0002419!7.01e-09!18;CL:0000790!7.01e-09!18;CL:0000838!2.33e-07!52;CL:0000080!3.07e-07!6;CL:0000542!4.30e-07!53;CL:0000051!4.30e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.69e-17;25!CL:0000791;1.01e-09;18!CL:0000789;1.01e-09;18!CL:0002419;1.01e-09;18!CL:0002535;3.78e-09;2!CL:0000625;1.40e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.22e-17,25;CL:0000827,4.22e-17,25;CL:0000838,5.03e-10,52;CL:0000542,8.76e-10,53;CL:0000051,8.76e-10,53;CL:0000791,1.23e-09,18;CL:0000789,1.23e-09,18;CL:0002420,1.23e-09,18;CL:0002419,1.23e-09,18;CL:0000790,1.23e-09,18;CL:0002535,6.69e-09,2;CL:0000625,1.39e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.01e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;1.66e-09;2!DOID:3908;5.43e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.06e-09,2;DOID:3908,5.07e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.48e-20!57;UBERON:0005068!7.48e-20!57;UBERON:0006241!7.48e-20!57;UBERON:0007135!7.48e-20!57;UBERON:0005743!2.41e-18!86;UBERON:0000073!4.50e-18!94;UBERON:0001016!4.50e-18!94;UBERON:0002780!4.91e-18!41;UBERON:0001890!4.91e-18!41;UBERON:0006240!4.91e-18!41;UBERON:0003080!2.25e-17!42;UBERON:0001017!3.05e-17!82;UBERON:0002616!4.03e-16!59;UBERON:0001893!8.04e-16!34;UBERON:0003075!8.51e-16!86;UBERON:0007284!8.51e-16!86;UBERON:0002020!1.36e-15!34;UBERON:0003528!1.36e-15!34;UBERON:0000955!6.59e-15!69;UBERON:0006238!6.59e-15!69;UBERON:0002791!7.09e-15!33;UBERON:0002346!1.82e-14!90;UBERON:0007023!2.94e-14!115;UBERON:0001869!3.09e-14!32;UBERON:0003056!3.69e-13!61;UBERON:0000956!1.27e-11!25;UBERON:0000203!1.27e-11!25;UBERON:0001950!4.82e-10!20;UBERON:0002619!5.14e-10!22;UBERON:0004121!1.15e-09!169;UBERON:0000924!4.51e-09!173;UBERON:0006601!4.51e-09!173;UBERON:0000153!1.35e-08!129;UBERON:0007811!1.35e-08!129;UBERON:0000033!3.79e-08!123;UBERON:0000178!1.23e-07!15;UBERON:0000179!1.23e-07!15;UBERON:0000463!1.23e-07!15;UBERON:0002298!6.47e-07!8;UBERON:0000200!9.41e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;3.78e-09;2!UBERON:0004801;3.78e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,6.69e-09,2;UBERON:0004801,6.69e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0.527533956456907,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,1.29902789771517,0.903106483949403,1.10195093839151,0,1.15148819429164,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,1.02800749499755,1.00311897234407,0,0,0,2.45103005147382,2.3568472597987,1.32920336750173,2.43723477388514,0.512365278902701,1.1705341280389,0.493313713811028,0.276350017785848,0,0.14828656316206,0,0,1.24640276967323,0.383220493601921,0,0.506039384039006,1.27426165729639,1.30216690771284,0,1.50575119077773,0.76791966692651,0,1.18388626022008,0.821127996921047,1.00803371612366,0,0.724122019413995,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.392937226493138,0.728590576585084,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.662648841607426,0.464775771478074,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0.381988425558278,1.17217447210047,0,0,1.8020583470635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.862510299438069,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.533637789017222,0.303127571446259,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0,0,1.01950509218015,1.66215201785745,0.895499018888713,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0,1.29694662238543,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92995134857262,0,0,5.79505598242887,0,0.95497793895076,0.593929361665277,0.614321404198464,0,0,0,5.10892010102955,0,0,0,1.0077309914171,0,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0.463840490809256,1.99613798001194,0,0,0,0,1.27126825146383,0,0,0,0,0.885741385813839,0.482385754501632,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77912677208373,5.31324937469962,6.36973891983278,0.741412462787447,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0.293977192243133,3.91766429611812,0,0,0,0,0,0,0,0,0,0,0.633107959558787,6.6487470129833,0,0.213452994739353,0,0,0,0,1.58460277786965,0,6.83512700388707,0,0,0,0,0,0.410716136675979,0,0,1.31443677139657,0.279282401272254,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0.964518890790115,1.51293380256957,1.24632101408756,0.2249738915515,0,0.789744236554321,0,0.0788057072991982,0.157363764404994,2.74560874950457,0,4.41404953834724,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.52893040697076,0,0.704815022316672,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0.886068179966986,0.488105059607853,0.500763722825999,1.14681839138014,0.665574309221114,0.993542447062135,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.414775308455192,0.584580926518165,0.398594520940089,0.817826971279221,0,0,2.53574548030352,3.59977312538874,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770750701157514,0,0.957803154342908,0.41023272848151,0.504143392443436,0.553258019713743,0.484426936895553,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2156765231311,0,0.206686796501184,0.824405532520789,1.09394961803644,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0.171488009437418,1.15548546060614,0.657727735628491,0.118193840883968,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.236664001461131,0.681707238073262,0,0,0,0,0,2.15930513953535,3.04794812455674,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0.470317296361523,0,0,1.17785080268967,0.891139200981258,0,0,0.187967835959707,0,0,0,0,0,0,0.458729283404541,0.573358332605805,0,0.747906392100062,0.872701380680755,0,0,0.462175628631418,0,0,0.327796715891087,0,0.203977659483963,0.534434810531121,0.275684698604535,0,0,0.267964130156178,0.829169439458779,0.310298987585686,0,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0.5388164241167,0.0717222053926763,0.332660356546013,0,2.98836568457603,0,0,0,0,0.406896178315738,0,0.402547587182052,0.320568492303233 | |||
|short_description=p@chr1:151811365..151811395,+ | |||
}} |
Revision as of 20:52, 10 January 2014
Short description: | p@chr1:151811365..151811395, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:151811365..151811395, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.22e-17 | 25 |
pro-T cell | 4.22e-17 | 25 |
lymphoid lineage restricted progenitor cell | 5.03e-10 | 52 |
lymphocyte | 8.76e-10 | 53 |
common lymphoid progenitor | 8.76e-10 | 53 |
mature alpha-beta T cell | 1.23e-09 | 18 |
alpha-beta T cell | 1.23e-09 | 18 |
immature T cell | 1.23e-09 | 18 |
mature T cell | 1.23e-09 | 18 |
immature alpha-beta T cell | 1.23e-09 | 18 |
epithelial cell of cervix | 6.69e-09 | 2 |
CD8-positive, alpha-beta T cell | 1.39e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 6.69e-09 | 2 |
cervix epithelium | 6.69e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.06e-09 | 2 |
non-small cell lung carcinoma | 5.07e-08 | 5 |