FFCP PHASE1:Hg19::chr1:182353414..182353425,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:182353414..182353425,- | |||
|id=chr1:182353414..182353425,- | |||
|ontology_enrichment_celltype=CL:0000839!7.70e-13!70;CL:0000557!1.64e-12!71;CL:0002194!4.11e-12!63;CL:0000576!4.11e-12!63;CL:0000040!4.11e-12!63;CL:0000559!4.11e-12!63;CL:0000766!4.91e-12!76;CL:0002009!1.89e-11!65;CL:0000763!1.46e-09!112;CL:0000049!1.46e-09!112;CL:0002057!3.82e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.82e-31;6!CL:0002581;5.37e-13;1!CL:0002591;5.37e-13;1!CL:0000473;1.49e-08;39!CL:0000234;1.49e-08;39!CL:0000771;3.92e-07;2!CL:0002600;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.32e-31,6;CL:0002581,4.23e-13,1;CL:0002591,9.73e-13,1;CL:0000473,2.21e-08,48;CL:0000234,2.21e-08,48;CL:0002600,2.74e-07,2;CL:0000766,3.41e-07,72;CL:0000771,3.93e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.25e-15!115;UBERON:0002371!5.83e-10!80;UBERON:0004765!1.63e-09!101;UBERON:0001434!1.63e-09!101;UBERON:0002390!8.00e-09!102;UBERON:0003061!8.00e-09!102;UBERON:0001474!1.36e-08!86;UBERON:0002780!4.76e-08!41;UBERON:0001890!4.76e-08!41;UBERON:0006240!4.76e-08!41;UBERON:0001049!6.66e-08!57;UBERON:0005068!6.66e-08!57;UBERON:0006241!6.66e-08!57;UBERON:0007135!6.66e-08!57;UBERON:0002791!8.00e-08!33;UBERON:0002020!9.00e-08!34;UBERON:0003528!9.00e-08!34;UBERON:0000955!9.40e-08!69;UBERON:0006238!9.40e-08!69;UBERON:0003080!1.00e-07!42;UBERON:0002619!1.65e-07!22;UBERON:0001893!1.86e-07!34;UBERON:0001017!2.46e-07!82;UBERON:0005743!2.84e-07!86;UBERON:0000062!3.05e-07!511;UBERON:0002616!3.08e-07!59;UBERON:0000956!3.69e-07!25;UBERON:0000203!3.69e-07!25;UBERON:0002193!4.08e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;7.61e-09;6!UBERON:0001954;2.15e-07;2!UBERON:0003022;2.15e-07;2!UBERON:0002421;2.15e-07;2!UBERON:0002600;2.15e-07;2!UBERON:0002148;2.43e-07;2!UBERON:0006331;2.43e-07;2!UBERON:0009662;2.43e-07;2!UBERON:0000078;3.92e-07;2!UBERON:0002012;3.92e-07;2!UBERON:0005406;3.92e-07;2!UBERON:0008886;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,8.57e-09,6;UBERON:0001954,2.15e-07,2;UBERON:0003022,2.15e-07,2;UBERON:0002421,2.15e-07,2;UBERON:0002600,2.15e-07,2;UBERON:0002148,2.28e-07,2;UBERON:0006331,2.28e-07,2;UBERON:0009662,2.28e-07,2;UBERON:0005406,3.48e-07,2;UBERON:0000078,5.28e-07,2;UBERON:0007497,5.28e-07,2;UBERON:0003643,5.28e-07,2;UBERON:0003504,5.28e-07,2;UBERON:0003469,5.28e-07,2;UBERON:0003496,5.28e-07,2;UBERON:0002012,5.28e-07,2;UBERON:0008886,5.28e-07,2;UBERON:0007303,5.28e-07,2;UBERON:0002061,5.28e-07,2;UBERON:0005432,5.28e-07,2;UBERON:0004363,5.28e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0.217010870715852,0.895661896959697,0,0.257575567634187,0,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0,0,1.35426486594342,0.188242339542605,0,0.449446968890169,0.306083892370903,0.320929027076094,0,0.659702600373432,0.598390972864896,0.426224750532694,0,0,0,1.00499466102697,0.521482918420201,0.434377689410233,0,0,0,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0.469737994575059,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0.234004265139238,0.891786973732369,0,0,0,0.0895585227028483,0,0.383382679165211,0.985326475791887,0.176096868026452,0,0.432359860250884,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0,0.290033387828457,0.170453254832202,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,1.9676842561399,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0,0,0,1.93866549219044,0.371072392647405,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0,0.166211681900156,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0.126621591911757,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0.0824158583811665,0.0674035438541849,0,0,3.97614844904652,0.272406812223151,0,0,0.415440338029185,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,2.45637617086946,0,0,0,0.213574825135389,0.157204305099666,0.828478110694391,0,0,0,0,0,0.5013797880454,0,1.31149052283922,0,0,0,0,1.14681839138014,0,0,0.276697269872462,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.82046545696302,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,1.56215619722769,0.413373593002368,0.253663240775627,0,0,0,0,0.255524855279191,0.535701835878287,0,0,0,0,0,0.171488009437418,0.135939465953663,0.263091094251396,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0,0.3414369541879,0,0.430227358820278,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0.111855431797792,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0.267964130156178,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0,0,0.0636471582781649,0.404234377916439,0.217716747896961,0.342233301085281,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:182353414..182353425,- | |||
}} |
Revision as of 22:36, 10 January 2014
Short description: | p@chr1:182353414..182353425, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:182353414..182353425, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.32e-31 | 6 |
perirenal preadipocyte | 4.23e-13 | 1 |
smooth muscle cell of the pulmonary artery | 9.73e-13 | 1 |
defensive cell | 2.21e-08 | 48 |
phagocyte | 2.21e-08 | 48 |
smooth muscle cell of trachea | 2.74e-07 | 2 |
myeloid leukocyte | 3.41e-07 | 72 |
eosinophil | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
brainstem | 8.57e-09 | 6 |
Ammon's horn | 2.15e-07 | 2 |
lobe parts of cerebral cortex | 2.15e-07 | 2 |
hippocampal formation | 2.15e-07 | 2 |
limbic lobe | 2.15e-07 | 2 |
locus ceruleus | 2.28e-07 | 2 |
brainstem nucleus | 2.28e-07 | 2 |
hindbrain nucleus | 2.28e-07 | 2 |
perirenal fat | 3.48e-07 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 5.28e-07 | 2 |
developing epithelial placode | 5.28e-07 | 2 |
respiratory system arterial blood vessel | 5.28e-07 | 2 |
respiratory system blood vessel | 5.28e-07 | 2 |
respiratory system artery | 5.28e-07 | 2 |
head blood vessel | 5.28e-07 | 2 |
pulmonary artery | 5.28e-07 | 2 |
pulmonary vascular system | 5.28e-07 | 2 |
pharyngeal vasculature | 5.28e-07 | 2 |
truncus arteriosus | 5.28e-07 | 2 |
aortic sac | 5.28e-07 | 2 |
pharyngeal arch artery | 5.28e-07 | 2 |