FFCP PHASE1:Hg19::chr10:72576503..72576516,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8879 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10817 | |||
|TSSclassifier=strong | |||
|UniProt=O95470 | |||
|association_with_transcript=-93bp_to_AB384155,AF144638_5end | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_11_at_SGPL1_5end | |||
|id=chr10:72576503..72576516,+ | |||
|ontology_enrichment_celltype=CL:0002603!1.17e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002568;2.70e-40;1!CL:0000322;1.40e-14;3!CL:0000632;1.96e-14;3!CL:0002569;7.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002568,2.21e-40,1;CL:0000322,1.40e-14,3;CL:0000632,2.09e-14,3;CL:0002569,6.78e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;6.62e-41;1!DOID:1357;6.62e-41;1!DOID:3910;3.81e-21;2!DOID:0050615;5.28e-11;16!DOID:3908;2.74e-09;5!DOID:1325;5.38e-07;7!DOID:3904;5.38e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.62e-41,1;DOID:1357,6.62e-41,1;DOID:3910,3.81e-21,2;DOID:0050615,5.28e-11,16;DOID:3908,2.74e-09,5;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0005911!3.57e-07!82;UBERON:0009569!8.68e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;6.62e-41;1!UBERON:0001825;6.62e-41;1!UBERON:0004903;3.81e-21;2!UBERON:0002173;3.81e-21;2!UBERON:0002186;3.81e-21;2!UBERON:0004821;1.40e-14;3!UBERON:0007499;1.40e-14;3!UBERON:0003215;1.40e-14;3!UBERON:0010368;1.40e-14;3!UBERON:0009911;1.40e-14;3!UBERON:0002299;1.40e-14;3!UBERON:0006524;1.40e-14;3!UBERON:0008874;1.40e-14;3!UBERON:0002169;1.40e-14;3!UBERON:0004894;1.40e-14;3!UBERON:0009856;2.80e-11;4!UBERON:0003422;7.01e-08;6!UBERON:0003104;6.21e-07;7!UBERON:0009142;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,6.62e-41,1;UBERON:0001825,6.62e-41,1;UBERON:0004903,3.81e-21,2;UBERON:0002173,3.81e-21,2;UBERON:0002186,3.81e-21,2;UBERON:0004821,1.40e-14,3;UBERON:0003215,1.40e-14,3;UBERON:0010368,1.40e-14,3;UBERON:0009911,1.40e-14,3;UBERON:0002299,1.40e-14,3;UBERON:0006524,1.40e-14,3;UBERON:0008874,1.40e-14,3;UBERON:0002169,1.40e-14,3;UBERON:0004894,1.40e-14,3;UBERON:0003422,6.78e-08,6;UBERON:0007499,2.43e-07,25;UBERON:0009856,4.28e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.939269553886573,0,0,0,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55126058909333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,9.37649284461163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0,0.137041924646751,0,0,0.782205530939212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.471612915298998,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,38.3211994850572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.857766365499703,0,0,0.231522474323834,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0.280272163313789,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0.118920090777569,0.33883824611688,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.193373663920732,0,0,0,0.160482733378337,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0.129177819672012,0.372448285775147,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0.162806537221949,0.106727345877715,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p11@SGPL1 | |||
}} |
Revision as of 03:20, 11 January 2014
Short description: | p11@SGPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SGPL1_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | -93bp_to_AB384155, AF144638_5end |
EntrezGene: | SGPL1 |
HGNC: | 10817 |
UniProt: | O95470 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 2.21e-40 | 1 |
pneumocyte | 1.40e-14 | 3 |
hepatic stellate cell | 2.09e-14 | 3 |
mesenchymal stem cell of umbilical cord | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 6.62e-41 | 1 |
paranasal sinus | 6.62e-41 | 1 |
bronchoalveolar duct junction | 3.81e-21 | 2 |
alveolar duct | 3.81e-21 | 2 |
bronchiole | 3.81e-21 | 2 |
pulmonary alveolus epithelium | 1.40e-14 | 3 |
alveolus | 1.40e-14 | 3 |
pulmonary lobule | 1.40e-14 | 3 |
lobule | 1.40e-14 | 3 |
alveolus of lung | 1.40e-14 | 3 |
alveolar system | 1.40e-14 | 3 |
pulmonary acinus | 1.40e-14 | 3 |
alveolar sac | 1.40e-14 | 3 |
alveolar wall | 1.40e-14 | 3 |
mesenchyme of umbilical cord | 6.78e-08 | 6 |
epithelial sac | 2.43e-07 | 25 |
sac | 4.28e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.62e-41 | 1 |
maxillary sinus cancer | 6.62e-41 | 1 |
lung adenocarcinoma | 3.81e-21 | 2 |
respiratory system cancer | 5.28e-11 | 16 |
non-small cell lung carcinoma | 2.74e-09 | 5 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |