FFCP PHASE1:Hg19::chr11:101000524..101000535,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5241 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8910 | |||
|TSSclassifier=strong | |||
|UniProt=F5GXE8,P06401,Q8TDS3 | |||
|association_with_transcript=8bp_to_ENST00000537623,NM_000926,uc001pgh.2,uc001pgi.2,uc001pgj.2,uc009yww.1,uc009ywx.1_5end | |||
|coexpression_cluster_id=C233 | |||
|description=CAGE_peak_3_at_PGR_5end | |||
|id=chr11:101000524..101000535,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.89e-20;2!UBERON:0006298;4.15e-11;1!UBERON:0005754;4.15e-11;1!UBERON:0010227;1.10e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.07e-10;4!DOID:1612;1.07e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.10e-10,4;DOID:1612,1.10e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.38e-49!115;UBERON:0001049!9.03e-11!57;UBERON:0005068!9.03e-11!57;UBERON:0006241!9.03e-11!57;UBERON:0007135!9.03e-11!57;UBERON:0003075!3.20e-09!86;UBERON:0007284!3.20e-09!86;UBERON:0002616!5.22e-09!59;UBERON:0002346!1.44e-08!90;UBERON:0003080!2.12e-08!42;UBERON:0002298!2.38e-07!8;UBERON:0002780!2.39e-07!41;UBERON:0001890!2.39e-07!41;UBERON:0006240!2.39e-07!41;UBERON:0001869!3.72e-07!32;UBERON:0005743!3.81e-07!86;UBERON:0000955!5.93e-07!69;UBERON:0006238!5.93e-07!69;UBERON:0001017!7.78e-07!82;UBERON:0000073!9.19e-07!94;UBERON:0001016!9.19e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.09e-13;3!UBERON:0004054;1.09e-13;3!UBERON:0006834;2.53e-11;1!UBERON:0000998;4.15e-11;1!UBERON:0001736;4.15e-11;1!UBERON:0006868;4.15e-11;1!UBERON:0005795;1.10e-10;1!UBERON:0002079;1.10e-10;1!UBERON:0002135;1.10e-10;1!UBERON:0001301;1.10e-10;1!UBERON:0005904;1.69e-10;4!UBERON:0004175;1.29e-07;21!UBERON:0001044;2.78e-07;6!UBERON:0003293;2.78e-07;6!UBERON:0003294;2.78e-07;6!UBERON:0010047;2.78e-07;6!UBERON:0003408;2.78e-07;6!UBERON:0000167;2.78e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.32e-13,3;UBERON:0004054,1.32e-13,3;UBERON:0006834,2.53e-11,1;UBERON:0000998,3.76e-11,1;UBERON:0006868,3.76e-11,1;UBERON:0001736,4.58e-11,1;UBERON:0006298,4.58e-11,1;UBERON:0002135,9.05e-11,1;UBERON:0002079,1.10e-10,1;UBERON:0001301,1.61e-10,1;UBERON:0005904,1.95e-10,4;UBERON:0007023,3.70e-10,114;UBERON:0001044,2.61e-07,6;UBERON:0003293,2.61e-07,6;UBERON:0003294,2.61e-07,6;UBERON:0010047,2.61e-07,6;UBERON:0000167,2.61e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97720486891308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06375246633948,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.671028323677248,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,1.9924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,4.16684417736373,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,16.9290568708354,0,0,0,0,0.31900115973192,1.28236630762607,0,0,0,0,0,0.980312671588698,0.167821586975843,2.84630599086278,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0.207376382794494,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,1.67569440763353,0.458320848023367,0,0.399358000997982,0.858452096273142,0.446342914883745,0.470284307407084,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0.26446520348538,0,0,0.427149650270779,1.25763444079733,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,3.38446477571658,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,2.04895972216168,0.620916591138472,0,0,0.271878931907327,0,0,0,1.33438257845874,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,1.72090943528111,0,0,3.38709640152743,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81155412280008,0.463044948647668,0,0,0.490296643507811,0,0,0.594092800654172,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,3.21110498383179,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0.12729431655633,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,55.4976156590214,1.62758471326295,0,0,0 | |||
|short_description=p3@PGR | |||
}} |
Revision as of 09:59, 11 January 2014
Short description: | p3@PGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PGR_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | 8bp_to_ENST00000537623, NM_000926, uc001pgh.2, uc001pgi.2, uc001pgj.2, uc009yww.1, uc009ywx.1_5end |
EntrezGene: | PGR |
HGNC: | 8910 |
UniProt: | F5GXE8P06401Q8TDS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.32e-13 | 3 |
internal male genitalia | 1.32e-13 | 3 |
uterus or analog | 2.53e-11 | 1 |
seminal vesicle | 3.76e-11 | 1 |
seminal fluid secreting gland | 3.76e-11 | 1 |
submandibular gland | 4.58e-11 | 1 |
submandibular gland primordium | 4.58e-11 | 1 |
mitral valve | 9.05e-11 | 1 |
left cardiac atrium | 1.10e-10 | 1 |
epididymis | 1.61e-10 | 1 |
duct of male reproductive system | 1.95e-10 | 4 |
adult organism | 3.70e-10 | 114 |
saliva-secreting gland | 2.61e-07 | 6 |
gland of oral region | 2.61e-07 | 6 |
gland of foregut | 2.61e-07 | 6 |
oral gland | 2.61e-07 | 6 |
oral cavity | 2.61e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.10e-10 | 4 |
breast cancer | 1.10e-10 | 4 |