FFCP PHASE1:Hg19::chr11:118662403..118662435,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1656 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2747 | |||
|TSSclassifier=strong | |||
|UniProt=P26196 | |||
|association_with_transcript=-431bp_to_NM_004397,uc001puc.2_5end | |||
|description=CAGE_peak_5_at_DDX6_5end | |||
|id=chr11:118662403..118662435,- | |||
|ontology_enrichment_celltype=CL:0000838!4.65e-15!52;CL:0000542!5.62e-15!53;CL:0000051!5.62e-15!53;CL:0000738!1.48e-09!140;CL:0002087!1.93e-09!119;CL:0000791!2.14e-09!18;CL:0000789!2.14e-09!18;CL:0002420!2.14e-09!18;CL:0002419!2.14e-09!18;CL:0000790!2.14e-09!18;CL:0000945!5.21e-08!24;CL:0000826!5.21e-08!24;CL:0002031!9.40e-08!124;CL:0000236!1.20e-07!14;CL:0000037!3.53e-07!172;CL:0000566!3.53e-07!172;CL:0000625!7.71e-07!11;CL:0000084!9.95e-07!25;CL:0000827!9.95e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.50e-11;53!CL:0000791;1.10e-10;18!CL:0000789;1.10e-10;18!CL:0002419;1.10e-10;18!CL:0000236;2.68e-09;13!CL:0000945;1.48e-08;24!CL:0000084;4.23e-08;25!CL:0000625;1.23e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.57e-17,52;CL:0000542,5.65e-17,53;CL:0000051,5.65e-17,53;CL:0000738,1.70e-11,136;CL:0002087,2.15e-11,115;CL:0000791,9.32e-11,18;CL:0000789,9.32e-11,18;CL:0002420,9.32e-11,18;CL:0002419,9.32e-11,18;CL:0000790,9.32e-11,18;CL:0002031,3.65e-09,120;CL:0000037,2.30e-08,168;CL:0000945,3.14e-08,24;CL:0000826,3.14e-08,24;CL:0000236,3.36e-08,14;CL:0000084,3.78e-08,25;CL:0000827,3.78e-08,25;CL:0000625,8.12e-08,11;CL:0000988,2.31e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.50e-11;53!CL:0000790;1.10e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p5@DDX6 | |||
}} |
Revision as of 10:41, 11 January 2014
Short description: | p5@DDX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DDX6_5end |
Coexpression cluster: | NA |
Association with transcript: | -431bp_to_NM_004397, uc001puc.2_5end |
EntrezGene: | DDX6 |
HGNC: | 2747 |
UniProt: | P26196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.57e-17 | 52 |
lymphocyte | 5.65e-17 | 53 |
common lymphoid progenitor | 5.65e-17 | 53 |
leukocyte | 1.70e-11 | 136 |
nongranular leukocyte | 2.15e-11 | 115 |
mature alpha-beta T cell | 9.32e-11 | 18 |
alpha-beta T cell | 9.32e-11 | 18 |
immature T cell | 9.32e-11 | 18 |
mature T cell | 9.32e-11 | 18 |
immature alpha-beta T cell | 9.32e-11 | 18 |
hematopoietic lineage restricted progenitor cell | 3.65e-09 | 120 |
hematopoietic stem cell | 2.30e-08 | 168 |
lymphocyte of B lineage | 3.14e-08 | 24 |
pro-B cell | 3.14e-08 | 24 |
B cell | 3.36e-08 | 14 |
T cell | 3.78e-08 | 25 |
pro-T cell | 3.78e-08 | 25 |
CD8-positive, alpha-beta T cell | 8.12e-08 | 11 |
hematopoietic cell | 2.31e-07 | 177 |