FFCP PHASE1:Hg19::chr12:54366780..54366791,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5123 | |||
|TSSclassifier=strong | |||
|UniProt=O43248 | |||
|association_with_transcript=-118bp_to_ENST00000546378,NM_014212,uc001sem.2_5end | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_12_at_HOXC11_5end | |||
|id=chr12:54366780..54366791,+ | |||
|ontology_enrichment_celltype=CL:0002178!7.01e-09!3;CL:0002574!4.90e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000214;5.96e-34;3!CL:0000153;2.45e-12;9!CL:0000447;2.45e-12;9!CL:0000327;5.93e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,5.96e-34,3;CL:0000153,2.45e-12,9;CL:0000447,2.45e-12,9;CL:0000327,5.93e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!9.01e-11!14;DOID:171!3.04e-10!10;DOID:0050687!1.13e-07!143;DOID:3095!8.03e-07!22;DOID:2994!8.03e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001052!2.43e-07!4;UBERON:0004913!3.01e-07!1;UBERON:0003703!3.01e-07!1;UBERON:0001174!3.01e-07!1;UBERON:0004914!3.01e-07!1;UBERON:0006834!3.62e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;5.96e-34;3!UBERON:0007616;5.96e-34;3!UBERON:0002217;5.96e-34;3!UBERON:0002018;5.96e-34;3!UBERON:0004905;1.07e-13;8!UBERON:0000982;1.07e-13;8!UBERON:0004770;1.07e-13;8!UBERON:0004457;2.45e-12;9!UBERON:0000042;2.45e-12;9!UBERON:0000486;1.33e-09;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,5.96e-34,3;UBERON:0007616,5.96e-34,3;UBERON:0002217,5.96e-34,3;UBERON:0002018,5.96e-34,3;UBERON:0004905,1.07e-13,8;UBERON:0000982,1.07e-13,8;UBERON:0004770,1.07e-13,8;UBERON:0004457,1.33e-09,12;UBERON:0000042,1.33e-09,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0.214840489736547,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,13.0897753039356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.637724760305049,0.619678821295011,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0.581207126840626,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.89091842798872,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p12@HOXC11 | |||
}} |
Revision as of 13:47, 11 January 2014
Short description: | p12@HOXC11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_HOXC11_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -118bp_to_ENST00000546378, NM_014212, uc001sem.2_5end |
EntrezGene: | HOXC11 |
HGNC: | 5123 |
UniProt: | O43248 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 5.96e-34 | 3 |
GAG secreting cell | 2.45e-12 | 9 |
carbohydrate secreting cell | 2.45e-12 | 9 |
extracellular matrix secreting cell | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 5.96e-34 | 3 |
layer of synovial tissue | 5.96e-34 | 3 |
synovial joint | 5.96e-34 | 3 |
synovial membrane of synovial joint | 5.96e-34 | 3 |
articulation | 1.07e-13 | 8 |
skeletal joint | 1.07e-13 | 8 |
articular system | 1.07e-13 | 8 |
cavity lining | 1.33e-09 | 12 |
serous membrane | 1.33e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.86e-08 | 14 |